© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0232900.1
AAATCAAACACATCAAGGACAATGTCAACCGGCCGTGCCGGCCAAAAGATGACAGATGACAAACGTGTAGACGCATGTATGATCGATCGATCGATCGAGCTGTTCATCAGCCATCAGGGCAAGCAGAATGGTCATCAACAACTACCAGAGGAAAGAAGCATCGGCAAGCCATTGGCCCATGCCTACCTTCTCCTACTTCTTCTTCCCTTACGTATTGTCTTGCAAATTGTATTTATAATTTTTTTGTCCGTGTGATGCATGCTTGCCTTGCCTTTTCTCCGTGTGAGAGAGAGCAAGGCGAGATATGGACGTCTCAACCATTTCTACCTATCATTTTCTTCTTGGGTTTGCGTTCGCCATGTCGTTGCTGCCGGCTATTAATTCAGCTCGATGTCTGCATATTTCCATGAACATTTTCAGCCATCTCTTGATCAGTTTACACTTGCGGAGCTGTTGGGCAAACCATTTATATGAGAGGATATGATCTGGTTGCATCCAAGCGTTTTTCTTGGGCTGGGAGAGTGCGATGTTGGCATGGTTCAATCAAACCGGGCAAACTTATGCACTAGCTAAGCAAGATGCAGGGATATGCAGTATGGTTTTGTTTGGTCTGATTGAGCCGTGCCAATATCACAAGCTTGCCTGGCTTAATTACATGTAGTAGTGTGAGGATATTGGATTCTTCCACAAGGTATGAGAATTGTCATGTTGTGTATTTGTGCTCCTTTATGCGTGTTATTTCACATGCCTGCCTATTAGATTTAAGTTTCTTTATGTTGTTTCATGCAAAGCTTTCAGAAACTATTTTGTCTGACGGTTCAAGCTTTACAGATTTAAGTTTTGCTGCTGGTACTAGCTGGTCAAATGGCACTAAAAGGTTTAAAACCATGTGAATATTTATGAATATCAATGTAGTAGTAACATAAATCTTACTCCTATCAAAGAAAAATCCCTCATCAGCAGCACACTAATCCTGACGTGTACGCAACCAAACAAGCCCTGCTTCTGTTCTTCCTCTTCTTCTTTTTCACACTGTTTTTCAGTTGAGTAGTTATCTTTCATGCATGCTTTGGTGTAGATTGAGATGTCCAACTTGATGTGATGATCTGGAAAAGAAGAAGCAATCTGAAGGTTGTCCAACTTAAGGTTTGATGCCTTAGATCAAATGGCCCAGCATCTGTACCTAACCTAGATGATATGACCTAAAACCTGCAACGAGCTGTCTGAATGTCTGATCGAGAAGCAATCTGAAGCCTCTTCTTTTTTCAGATACTATAATGCCATTGACCTGACTCTTCAGGTTGTGCTATCTCCAGGCACCATGTCCTCTCAAGGCCCATTTAGAAAGGCCAATCCACACGGTCCAAGAAATGGCCCATTAAGGGTCTTGATGCAGAGGATGAAGATGAACAGTGATCGATATGCTCAAATGCATAAGGGAGCCGTATTGATTCTCTGATTAAAAAAATATCCAACGACTTGGATTTAGGCCATGTTATATTCACTGGATTATTGAAAAAGATTATTTACTGTATTCTTAAAAAATATGTTTTTTTTCCTCAAAAGACTGTCTTCTATTGTACTGTTTAGAGCACTTGTTTTAAGTTTGGAGTATTTGTAAAGCTTATTTGTTTTTTGAACGGAAGCCAGCACTAGAGCGTGCTATTTAATTGAATATAGATGAAGAAAAATACAACCCCTAGGAGTAAGGAAAAACTGTACAGAGTTACATGTCGTCTATGAAGAAAAATTCCCCAAGTTTTTGCCTCCTCCTTTATTTTTATCATAAGTCGATAATTCGCTAGTAATCTTAAATCAAACTGGGCCTTATTCATAAAGCAGTGTTTTGAATAATATTAAAATCAACTGCTTTTGCTACATCATCCATGATCATCTCGTAGTCACTTAACAGCTACAGAGCGAGCCGTGCTGCCCTGTCTTTAGTGCCTTGTTTGAAACAAGCCCTTGATGTTGTACAAGCTAAAGTCTCACTCGATCGACAAATATAGTGCAGAAGATGACAGACTATGGGTCTGAAAAAACTGATGAGTACTTCATCAACAGCAATTCACCCAATGAGCTTTGATAGTTTCATGAAGGCGATCATGATGAAGTCCCAAATGCTGTCTCGTTAGCTTTTCGATCAGTGTGGCTGAAAGAGAAGTTGTCCGGGAATCGCGATGATACGTACTAATTTGCTACAAAAGGATAAAACAGTGCTTCTGACAACAATGGCGTCTTCACTGTCTGTGCACTGTAGATGAACCTGCATGATCATTTGTATATATACAGTTTGACGCATCAACGCATGGATATTTGAGTAATCGAATCTTGAGGCTTTAAGTTTCTTTTAATGGAAAAAGAATGCAAAAATTTTGTTGCCAGTGGTTTTTAGTTAAGCTCTTTCTCATCCTGTGTTTGATAGTGATATGCATAGAACGGTAGATCTTGTTGCTGTATTTGACACCGCAATTCGATTCGATTTCAAGACTCAGGTCACATCTCGCATTAATATGTGTAATCTTGCCCAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0232900.1 | 3 | 30027778 | A | G |
| Osa03LNT0232900.1 | 3 | 30027635 | G | A |
| Osa03LNT0232900.1 | 3 | 30028194 | T | C |
| Osa03LNT0232900.1 | 3 | 30028948 | C | A |
| Osa03LNT0232900.1 | 3 | 30029787 | G | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0232900.1 | osa-miR166j-5p | Cleavage | 5.0 | 16.041 | 1 | 21 |
| Osa03LNT0232900.1 | osa-miR415 | Cleavage | 5.0 | 8.478 | 1 | 21 |
| Osa03LNT0232900.1 | osa-miR1442 | Cleavage | 4.5 | 19.422 | 1 | 20 |
| Osa03LNT0232900.1 | osa-miR1880 | Cleavage | 5.0 | 16.861 | 1 | 24 |
| Osa03LNT0232900.1 | osa-miR2876-5p | Cleavage | 4.5 | 9.873 | 1 | 21 |
| Osa03LNT0232900.1 | osa-miR5144-5p | Cleavage | 4.0 | 11.038 | 1 | 21 |
| Osa03LNT0232900.1 | osa-miR5523 | Cleavage | 5.0 | 10.692 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0232900.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | C136 | R1618 |
| Osa03LNT0232900.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ403 | RZ630 |
| Osa03LNT0232900.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | C136 | R1618 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|---|---|---|---|---|---|---|
| Osa03LNT0232900.1 | osa-MIR171f | 100.0 | 127 | 1 | 127 | 1.47e-62 | 235 |
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)