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RiceLncPedia: a curated knowledgebase of rice Long non-coding RNAs
Sequence

>Osa03LNT0234400.1

AACCTAACACCCCTTTCCTTACATCCCCAAGACGAAAAATAACATCTTCACCGTACAACATCATCACCATCGTCCCCTCACCACTACTAACCAAAAGCATCCTATACAAACTTTACACACGCTGGTTGCTACCCCGCACGAATCCTCTCATGAAAAAACAAGAAGATGAGGTAGAACCGGTAGATAATTCACAGTATAATAAGATTGTAATGTCAGCACAACGCCATCTCCATTTTATCCCTTCCAGTGTGTTTCTGTTGTACTGTGTCTTCACCCCAGATTTTGCTGAATGGGCTGGGGCCTGGGCCAACCATATTGTAGAATGTTTCTGCATGCCGAGGCCAACTCTGAGTTCTTTCTTTGGCAGCACAAGCAGGTGCTTGTCAGATTCTGGGTGAGAAAGGAACCAGAGGTATATAACTTAACTAAGGCTCTCTATATGTGCAGGTGAATCCTGACTATCCTCTGTTGAGCTGTTGCTATGAAACCTTAAAGCTATCATCTTTTAGTGACCATGAGAACAAGTGGCCACTGGCATCCCCGCTCAGAAGCTGCTTCAGGTCGGGTGGAAGACAAAGGGCAGTGACCGGGTGCTTGTGAGCCTTGAGCACCTTCTGAAGAAGTAGCCTGTACTCCTGAGTCTGGCCATTCAAGCTCATCCCTCCAAGGGTGGACGGTGGAGATTTGCTCTTGCTGTTTGCTGCCTCATCAGACGTGTAGTGCACCATCTTCCATACCTTCACAGCACCGCTTTGATGACCTGTCACGTACCAGTTTGTGTCCTGCCAGTCCGAGTTTGTAGTGCTTGCCACAGACAAGATGAGATCCGAAGGAAGCTGAGAGGTATTAACCACAGCAAGACAGTCTCCGTTGACGCTCCAAACAGCAAAAAGAACACCGGCACCAGTCAGGATCTCACCAGTGAGATTGTTCACATGTAACGCAGACACTGATGCTGGGAACCTTGGCAGCTGCTTCACAAAGGCCAGGCTTGTCAGGTCCCACAAGATCACTGAACAGTCATCGGAGCCAGAGACAATTAATGAGTAAGGCTGGCTCACATAGATACATGTTATCTTGGCAGTGTGAGCGCACAGAGCTTTCTCCATTCTCAGGAGACGACGAGTGCCATCTTTGAAAAATCTCCATACTGCAACTACACCATCATCACCACCTGTTGTGAGAATGTTGCCGTCATGGCTAACTCCAGTGCACTGAATCTGACTACCACCATGAAGGTTTTCATGTGTTGATACAAGTTTATCCTGATCATAGGTCAATATTCTCAAACTGCGGTCAGGAAATCCCCAGGAAATATATTCACTATAATTTACTGGCTTGAGAAAGCTGTTCGCTGCAGCAATTAGGATCTTATCATTGTAGGTCACAATCTGGGAAACTGATGATGTTGTCTTCCGAATCTCTTGATGTGTAAGATACGCGCTGTACCGTAGAGGATGAGGAAGGACCTTCCTGTCAGTCCGTCTCTGAGGATGTGGTTTTTGGAATAATTGTTTGGGGGTCTGACCAAAATGATTGATTTGTGCCAGTATCGAAGCTTTCATGGTAGGATCTGATACGGAATCTATGTCAACATTGCCTTCATACGTGTAGTGATAGAAGACATTTACAGCATCTTCAGCTGCCTTTCCTCTCTGCTTATATCCAAAAATAAGATCTATCCAGTGATGCAGATTCTCGGATACATAGTCTGACTCCAAGGCTTCTCGATGCTTCCTGATGAACTCTCTGGAGCTACCTTTAGCCCAAGGCGGCAAAACAACATCACCAACCTTCTCTCCGGACTGTTTCTCCCCCAAGTCCAGATTAAATTGGTTCTCCAAAAATTCAGGCAAATAATAGAACTCCGGAATCAATTCTTTGACATCTGATGTGTTGCTCTTGCCAGCAGCACTTACCCATGTATCTTTAACACTATTGAATAAACGGTCTGCATGGTCAAATTGTCCACCCTGTAATTTCTGATTTTCCATACTAAAGGGAGGCAGTCTTAAAAGATAGAAAAGGACAATCCCAGCACTTGAATAATGAGAACCATAATGGAACTTTGGTACTTCAGGGTCATCCCAGCTATCATATCTCTTACGGAATTCCTCTTCTCCCCCTTCAGTTTGACATCCCATTGGTTTGTCAAGCTTACGGAACGTCTGTGGGTTTCTCAGATCTAAAGTATCACTCTCATAATCTGCAAGAACCCATGGAAATACTGGGTATTGCGTAAGGTCACTGTATCCTCGACCAGCAAGTGTATTTAGATGCATGAGATATTGGAAGTTGGTAATTTCTCCACTCTGCCATCTTTTAGAAAATGATTTTGCCATTATTTTGAAAAGACGGCTCCCCTCACCGCTATCCTGTTTTGAGGATGCTGATATTGTTGTGTCCAACATGCTATTTCGTGGGAGGTTCATGGCGGTCAGATTTTTGAAAACATCCTCCCTCTCCTTTTTGTGGAAAACTAAAAGCTCGTTACACCCGTCCATACTGAAAATCTCAATTGCAACAGGGCGAAGCTGATAATCACGCTTTAGGAGCTCATGGACGCTATCAAGCTTCCACATATGCCATGGATGAGGCAAATTGCTGCTACTGCAAAGCTTCTCCTTACCCCAAGCACCTCCATTGTATGCCCATGCTCTGCCACCAAGCAAAACTTTTGCTGTTGCACCCCACGTAGATGGTGATTTTTGGTGAGAATCGCAGCTTCCCAATACATCCTTTTTTACACCTAAAGCTTGATCGATGACAGAGAGCTCATCTTCATTGCCTTTTTCGTAAATGCAATTGGAATCATCAATGTAGAAGTTCTCAATGATGTATAAGCTAAGTTCTCCAATTAAAAATATTCCATCATGCTTGTCAAGACCAGCAACCCGTTCACAATTGTACTTATGCCTTATTTTTTCGGAAGGTTCCAGATAAGGTCTGATAAGATACTCTCCATTGTCAAGCAACTCCTTTTCCGATTTATCCTCTGAGGTTCTTGTATCGGTGCCCTTAACTGAAGGTGCCCGTCTAGGTGAATTAAATTCAGATTTACCGTGGACACTCTCTGTCATGTGATAAGAAAAGGAACTTGATTTCGCTCCATGTTCTGTTGCAGAGTGAAGACTTTGTTCGTTAATGCTGCTTTTATCATCAGTCCAGCCAATTGGAGGTGACACTGTGCTTCCTCCTTTGAATATGTCATCTTCATCTTTGAACGATGCAAAATCAGCAGCATCAAGATCCTTCCGTTCTGTGTCATAGGTCAAAAGATTCAAGCCTGACATTGTATCTGATCCAGATGTCATCACCATGTGCCCATCCTCTTTCTTGGTAATCTTAACATCATCTAACCCAAGGTTGCTGGCTAGAACATTATGAATAGTATCTATCTTAAATTTGGACGGTTCAAGTTTCTTCCGCATTCTATACGGTCCTTCAACAGCGCACAGCTGCCATGCAGGCTCTGTCGATAATTGCCGCACAGGGAAAATGCCTCTTTCATGTACAAGCTGTTGGAGCTGGCTTTGCCACTCACTTTCTCCATGCAGTATCCATCCATATTTGTCTTGACGAATCGCTCTTAGCTCTGTAGACATTACATCACGAACCAAATCAAGATTGTACCTCCGTTCATTTATCTGCTCCCAGTGCCTTGAATCTAGTTTTGCAATTTCACGTAATTTTCGTCCCATATCTTTCTTGCGCCTGACCTCCATGCCTTTTATTCTCACCCCAGGAAATTTTGCTGAGCCAGTAATATATTGAACCCACATTATTAAAGCGCACTGGTCTAACACTTTACTTATTGTTTGCTGAGAACTCTGGAGCCATTCAAAAAACGCTGTTGTACTTCCAGTCAGTAGTTTGTCGAGCCCTCCATGCAAGATATCCATCTGTTGCCCTTGGTTAGGCTTACTAACTAGGAGGTCCTCAAGAGACGGACGCCGATGCACTACCAAGTATTTAAGTAAATCCACTGCTAAATTTTGTGCAGTTAACCTCTTGTCACGAAGAAGTGCCATTAAATTTATGCAGAAACAACACATTAGATCATTATCAACATTGCTTGGACACAGCACCAGCCTCTTGTTGGCAATCAGAAGCTGAAGAACAGTACAGATATCAACAGTATAATCTTCCTGGGAAGGTTTAAAAATACCTAAACTTCTTCCAGTTTCTGTTAGGAAAGCCAGATTTGCAAGCAAGTCATCCTCCCCCATATTCTTAAGGAATGTTGGCAAGAAACAATACATTACCATCCGGTTAGTGTTCTTCAATATGGCGTGGATGTAAGGATCAAGTTGCCTGCCTCCTCGAGCAATGGATAGAATACCTTTACCTGAAGGTACTGCATCTTCAATACGGCCATCTTTATTAGAAAGCTGCAACATGGACATTAAAAATTCTAGCGTACGTAGCACACCGACTGGGGTTGGAAAGCAGCCCATGTATACACGATCAACAATCATCCAGCAAAGTGGGTCCAAATTTGCAGACCAGCGGCTCTTGTCAAGTTTCTTCCCATCTTCTTCATCATCAAGTAAGAGTTTTCTTTCAAGGAAGTTCATCAGTCTGCTTAGACACAAACCTTGAAAAACCAAAGCAGAATCGATATCTACAAACAGAGGCACACACTCCAGGATGCTCTCAATAAAGAGTGTTGCTTTGAGCTGTTCTGAGATAATATCAGCAAGGATTTGAGCAATGAAATCAAGAACAGCAGTAGCTCCTGCAGAGCAAGGACCACCCCCATAACCTAAATCATCTATGTCAAGCAAAAGCTTCGAATTAATTGGGAAAAGTGTGTTCACTGCAGGTGACCCCTGAATGTTTGTCTTCAGATCAGGGGATGAATCGAGGTCAATCCCAGATATAGTTGAAGACATGGATGGAGAGGCTGTTAGCTGCCTACCATCGCTGTATGATCCTGCACTGCCAGGCCAAGATGCAAATGGAGCCATCGGAGATGCAGTAGGGGTACTTGCTGCTTTGTGAGCTGATCTCTCAGATAAAACAGGAGACCCAATATTGTTCATAGAAGCTGAAGTGGGTGAATCAGCTGGTTGGTGGGAATCAGCAATGCCATTTGAACTTGGGGCTGACATCTGTCCTTGATCATGAGCACTCTGAACCACTTGGTTTGCTTGTCCATTCAAAAACGTGGTGCTCGATGCCTGATTGGAAGAGTCGTCTGCTTTTACTTCAGCAGTTTCGAAAGAGTTATGCATGCCACTACTTCCTGAGCTCGAACTTTTCTGCTCCTGGGGAAAACTTGCAATACTAAAAGTTTTGGCAGATTGTTCCTGATCCTGTGGCAAATTCGAAAAAGTATCTTTTAGACTTTCGTTGTCATCATCATGCATACACTTCTCATCTGTTGCCGCAGATGTTAGGTCCTTCGCCATCTTCACGGCACAATCAGACCTTACACAAGAGAAATATAGGTCAACACAGCTCTCTAGGAAATCATGCCGCCTGCAAACAGCAGAGAATGGTGGGCACATTTTTGTCAAATCAACCATGAACCGCAGTATTGAAGTAGCAACAGCAGGTGCTGCAGCTTCACCACCCATTAACCTAGCTGCATATGTCTTATGCATCAAGGCTTCTCCCTGAAGATCACCTCCCATGTCTGGTGTCGATTCCACAAGATCCGCAACTAAGGTGCCATTAAGGTGTGAAAGATTATTATTCTGATGTGCAAGCATAGACTTCATAATCAATGAATCAAATGTAGCTTTTGCCATTGCAATGATAGTATCCAATAGATCTACAAACTTCAATTCTCCGCAGTTTTCATCACTAGGCATAAGAGAATGGAAATCAAGCATGCGGACCTCTGGTACTCGAGGAAAAACAGGCTTTCCAAAAATCAGACAGAAGAGTATATAATATATTTCAGGGGAATCATAGAAGCTTGGAAGCACATGATTCAACCCTTGGAAACCTCCACTTGTACGGAACTTTAGAGCAAAAGTGGCAGAGGATGTAAGGCAAACTCCTAAGAGAGTCATGATCCATCTCATACTTGTTGGGTGCACAGCTTCATCAAGGAAATATGTGACTAATCTGGACGAAACAACTTTGTGCCATTGCTCCAGCATATCTTCAGCATTTATGGTTACTTGTAGATCAATAAGCATTTCTAGTAACATGTTCCTCACAATGACATGCTTTCCCATGGCCTCCCGAACAATCTGGCGGTTTGGTGTAAGTTCTGGAGGATCAAATGTCATGATTACGAATCTTACAACAAGCTCCAACTCAGAAGCTAGAAAACCATCCTCCAAGATGACACCAAGCAGAACAACTAGCTTTTCCAGGACAGGAATTTCAACATCACCACGTTGTAAAGTGACAAGAAGATGTTGTACAAGATTAATTCGCCGCAGTATTGTGAGGTTATGATTTCTAAACCAATGCATTGATACCATCCTCTCAAGAAATCCAAGGAGAGTTATTTGTACTGATATAGGAGCAGTAACCCAAATGGTCCAATCCAATAGAACATGTTCGACCATATCAGCATTTGACAAGACTATAAACTCAGAAGTCTCCCCAGCTAAGTCGGCATTCTCAAGCTCAGACAGATGGCTAAAAGAATCCTTTTGTGCTGAAAAATCATCTAGATCTCCATGTGATCCAATAGAAGACATATCATCACCAAACTTGGGTAATGTAAGATCATCAAGACTGGACTCTGGGGAGATTCCAGATGCATAGCTTGCTGTTCGGTTCATATTTGACTTTTGTGGCTCAGGAAATGAAGCTCCACAAGCAGCAATACGGAAAAAGATATCAAGAGACTGCATGTCAAATAATGACATTCTCCTATGCAGAAAAAGTGCAAGAAGATGATAACCCCTCAAGGACTGCATGTCCTTCACATTTTGATGGCTCTGTTGAAGAGATAGTGCAAGCAGTTCTAGTGCCATGTGCAGCATATCCCTAGTTTCAGCGGCTTCCACAAGAGCAAGAACAACAGGAATCCCACCAACTGTTTGAACAGTGTCACCAATTGTGCACTGGTTACACACATAAACATCCCCACTTAGGCGCCCATACCGCGGTATACCTCCTATTGGGGATGCAGCAGCAGAAGTTGGATCAACAAGGTTCAGCAAGGACAAAGTCCCAGATGCTCGAAAAGCATCTGATGAAGTCCCATCAAATGCAAATATTAGCTTCTTCCCGGACAGTTGTAAGGAAAGATTTCTTAACCTTTCCATATCCCAAACGATTCCACTGCTCTCAAGTCTAGAGTTCCCTTGTTTCATTGCGCTATCAACACGCTGGCTGCCTGAAGGTGCAATTACTTCCAATTCCAATGAATCAAGAATTGCCATCACCTCCCCACCACAGGCCCAGTTAGGGACAAATCTCAGAAGATCAGTGTCCTGGAACAATCCCCTGTAACCTTGTCCAAGAATATACATGAAGCAAATGCTGCCAGGTGTTAAGACTTCCTCAAAAAGATAACAACACCGAAGCCGCCATGATAGGTCTGAAACTTTGGCTCGGATAGCAGGTGTACCAAGTGTTACTTGCAAGGATTTACCAAATGGGGATGGAGAGTATCCAAGTTTGCCGGTGTGCCTCAACTTTCCATCAAGATATAGACTGGCCACACTTGATTGAAAGAGGCCAGCTAATGCATTTGGTTTGCTATGTACAACTGCAAGATGATGCCATTTCCCTTCTTCCATCTCAATGCCTGGAAATGATAATGAACTTGAATTGCTTGTTGCAATGGTAAAAACACCATTGTCATGGAGATAAAGTTCTGCATACAGAGTGTTGGCATCATCAACTGCACCTACAGAAAAGATGCGCATAACTTGTCCATTCCTTTTACTATAAGACCCTTTTGATGTTTTTTCTGCTTCTTTAGGATGGCTTCTAAAGAAGTTCTGAAATTGGAACCAGCAAACGAAAGAGTATCCAGAAACAGGTGGCCATGTCCTCTCTCCTAATGAAACTTGAATAGATGAATGACCAGCTTTGCTCATGTCCAACTCAATGAAAGGGGCTAGAGAAATACTTCCTTGTCTGACATCTTCAATTTGGATTAACTTGTCCATCATATTAACAAAAAGATGACCAGAACACTTCACTTTCAGCTGAAGTATATACCTCACCAGAAGTCTTAGTTCAGAAGAAGACAGCCTATAAGCACCCAGAACTTCAACAATTCTCAAAGCGTGATTAAGGATAGGAGATGAGCCCTCCAAAAATGGGTTGATTGTCTCAAGTAGAAGACCAACACATCCTACAGAAGTTAAATTCTCCTGGTTGAAGGGACCAGCATTTGCTAGCTTCTCAATGAATCTCAGCAGCTCGAGTTGAACTTTAGGTGTAAATACTAGCAAAGAGCGGATCAAAACAACTACAGCACTAGCATTATATATACGCTCCTTGTCAAGCCTTGATAGTCCAAATGAGGTTGCAGACAAGAAACCTGATTCATCCTCTGGGTTTTCAGATGAAATGCTCTCTACCTGCAGGTTACTAGTGGGAGGAAGAACAACCTCAAGTGCAAGCTCAAGCAAAAGCAAGATAACATGCTTCTCACAATCCACACAGAGCAACCCAGATTCAGACAGAAGATCATAGAAAGTGTTGGAAGACAGGATTGTATGCAGTCTTATCCTATTAACAGGATTGCTGTATACTGCAGCTGTCATAGCTCGCATTAGAAAACCAAAGATCTTCATATGAGTAAGCAAAGATGATTCAGTCTCCTCGTTTTCACTGTCATTCTGGAAACTGTGAAGCGTTGTTAGTAGCAGGGAAAACCCAGTGGCTTCTCCAAAAATTCTTTGAGCTGAACTGTTTGCCCCAAGAATACGCCACAAAGCGCCAAAAGTGTCACACTTCGCATCATTGTCAAGTTTCTGTTGAGAACCTGACGAAGTTGATACCATCCCACTCTTCAAGATTTCTATCAGGGACCCTATTTCCTCTGGATGAGCCTGAAGAGAATCTTCGATTATCAGGCAAGACAATAGCCGTAATACCCCAGATCTGTGGCTTTCAGATACCAAGAAAGGAAGAATCGTATTAACGCCATTAGAAGATCTGAAAGTTTGTTGATTAGGCTCAGCTCTCTTCAGCAGATAAAAAAGACAATCCCAAGCAACAGTTATTGTCCCTTCATCTTCAAACATGGGAAATTTGGTGGAACCAGAAGCCATTAGCTTCGGAGAAAGAATCGCATCTTTGTTATCCATGGTTTTTCGAAAACTACTTGCACTGGACATCCTCTGTGCAGACTTAGGGGTCCTGTTTTGTGGCTCCTCTCCAAAAAAAAGCTTGTTCTGTTTCAGGTCATCTAACAACGCTCCAAGTACACCTACTTCCCTGAGAACCTTTTTGTACTGCTGATCAAAGGAAAGGAGCTTCACAAAGAAAGAGAGTATTGTATGCTTAAGACTGGTAGAAATTGGTTGCTGCAGTAAGCAACAGAGTGATAACAACTCCTGCTCTGGGATGCAGTTTACAACAGTGACCGCATATTCTAAAATTTTTAAGATGACCTCTTGAAGTGCTGGAGGGAAGCCACCCATGTTTAGGATAAAAAGAGGCACAGTTCGCAGTTGTTGACATAGCTTGTAATTCTCAAGATGACTTGAGAAAATCTTGAACATTCTATTTAAAACTTCAGCTTGCACTTCCAAGTTGTCTGCCTTCAGAAATATATCCTGTAGCATCTGAATGGCCTCAAGATCTTTTACTTTGGGACTGTTAATCTCCAAAATCTCATCTGCGAACTTGTCAACAGATGGAGTCCGGCTTCTGTTGTGGCCTGTTCCCTTCCCATGAGAAGATTTCATACTTTTACCAACATAATTTTCAGACAGTCCAGTTTGCGACAAATTTACAAGAACATCAAGCAATCTTGATAGCTGTGGTGAAAGATCGGATGTGAATGTATCTTGTTCTGATCTGTGAGGAGGATTCACTCCATCCTCAGATGCTAACTTGGGCGAAGATTGGAGAACCTGGTTCTTATGTAAGCTACATAGTGTAAGAGCAAACTGAACAAGGAACTGATAGCCATGAGCATTATGTATATCTTCCCTGAGCCTAACGGATCCAGCTTCAGGCCTGTAAGATAGCTCAACACATTCAAGTAAGAGATCCACAATGCCCATGGTGTAAGCAGCATCACCATTCTGCGGATTGAAATCTTTCACGGCCATAAGGAGAACTTTAATCAACTGATGCTTCCTTATATAGTTTGCTGAAGTCCCATTGTCATTCGCAAGAAGGAGACCAAGAACCTGCATTGCGTGGCGATGAAGCTGAATTGTGTGAATTGGAACAAGACCCTCCCTAAATTGAGAGAACACGGTCAGGGAACCATTTGCAACCATGTGGAATAGAACTTGTAGAGCATCATCTTCAATTAGGCTTGGTGCAGCAGATGGATGGCTCGCTAGTGCCTTCATTGTATGTACTACACTTGCCTCGATCTCAAGGCGCCGTGATAGCATAGGACCCCAATCTTTACTCTTCTCACTGGTTGAAACTTCTTGACCAACAGGAGAGGATTTTTGGGAGGATTCATCAGGACTCAATAGGGAATTGAGGATATATATAAGGCAGCACAAAATACCAGAATCCAACAGAGGCTGCTTATCGATAGTCTGTGTCACAAGAACTTCAACTGCATATAACAAATTTGAACCTGGACATATGCCAAGCTCTGTGATCTCCGAAAAGAAACCAATAACATCAGCAACACGCAAAGATCTTCCCTTACTGTGAATTCTTAGTTTTTCCACATCTGTAACGAAAGCTCTTCCAATAACAAAAGCAAAAACATGTGCTTCTACTAACTTTGTAACTAATTCAGCTACACTAGAGTGCTCCTTCACTAGCCTACAGAAGACATCTACTGCCAAATTTAAGGCCCTTTCTTTCTCCTTTTCAGAGCTGGAAGAACGGAATTCTTCCCAGAACCTCCTGAAGTCCAACTCCAACTCATTTTTTCCCCTGGCAGGGGACGCGGAGACGGCGGAGGGCGAGCTCCCGGACGCCGCCGCGACGCCGCCACCTCCGACCGACCCACCCTCGTCGGCGGCGCTGAGCCGCGGGGTGGCTTGGCCGGGGTCGCCCTGCTTCTGGCGGTTGAGCGGGGACGACGACGACCCCGGCGGCGGCGGCGGCGGCGGAGGCGGCTGCTCCTGCTCCTGCTGGCCGGCGAAGACGACCTTACTGAGCAATGTCGACCATTTCATGGTGCCGACCCCTCATCCGCCGCGCAGATCCCGGCCGGATCCCGCCGATTCGCCGGAATTCCGACGCGATCCCCCCCCCCCCCTCCTCCTCTCCTCCCACCCACCTAGCTCCTATCACCAACAACAACAAAAAATCGCCTCCTCCTCCTTCCCCTCCCCGCGTGCGCGCGCCTCTCGCCTCCCTCCTCCTCTGGTCGCCTCCCTCCTCCTCCTCCTGCCCCTATTTTTGCTTGTGTTTTTTCTCTCCCTCGCTTGTAATAATTATTTTTTTTCCTTTTTCTCTCCCTTTTGTTTCCTCCTTTTCTCCCACGCGCCTCCTCGCTATCTCGTCTTCCTCGACGACGCGCTCTTCCTTCCCCTCTGTCTTTCTCTCTCTGTTTGGTTTGTAATTTGTGTGTGTACTGTGCGA

Coding Potentia
Explanation CPC Score
noncoding (weak) -0.295373
Genome Browser
Expression
Variation
Transcript ID Chromosome Locus Ref Alt
Osa03LNT0234400.1 3 30568341 T A
Osa03LNT0234400.1 3 30565362 T C
Osa03LNT0234400.1 3 30574568 A C
Osa03LNT0234400.1 3 30565029 A T
Osa03LNT0234400.1 3 30565131 C A
Osa03LNT0234400.1 3 30568680 A G
Osa03LNT0234400.1 3 30569227 C G
Osa03LNT0234400.1 3 30569513 C T
Osa03LNT0234400.1 3 30569910 T C
Osa03LNT0234400.1 3 30571229 C T
Osa03LNT0234400.1 3 30571330 T C
Osa03LNT0234400.1 3 30576706 T C
Osa03LNT0234400.1 3 30577245 A C
Osa03LNT0234400.1 3 30578354 T C
Osa03LNT0234400.1 3 30578995 T C
Osa03LNT0234400.1 3 30579277 C G
Osa03LNT0234400.1 3 30579598 T G
Osa03LNT0234400.1 3 30580472 T G
Osa03LNT0234400.1 3 30571848 G A
Osa03LNT0234400.1 3 30574105 G A
Transposon
Transcript ID Transposon ID Chromosome Strand Start End Counts
small RNA targets
Transcript ID MiRNA ID Inhibition Expectation Score Binding Start Binding End
Osa03LNT0234400.1 osa-miR5531 Translation 4.5 18.452 1 22
Osa03LNT0234400.1 osa-miR5797 Translation 4.5 17.23 1 21
Osa03LNT0234400.1 osa-miR1319b Cleavage 5.0 12.121 1 24
Osa03LNT0234400.1 osa-miR5827 Translation 3.0 14.494 1 21
Osa03LNT0234400.1 osa-miR5827 Cleavage 4.5 14.708 1 21
Osa03LNT0234400.1 osa-miR5833 Cleavage 5.0 17.866 1 21
Osa03LNT0234400.1 osa-miR6245 Cleavage 4.0 20.65 1 21
Osa03LNT0234400.1 osa-miR1440b Cleavage 4.5 20.923 1 21
Osa03LNT0234400.1 osa-miR6246 Cleavage 3.5 15.78 1 23
Osa03LNT0234400.1 osa-miR6248 Cleavage 3.5 23.815 1 21
Osa03LNT0234400.1 osa-miR156f-3p Translation 5.0 16.84 1 22
Osa03LNT0234400.1 osa-miR156h-3p Translation 5.0 16.84 1 22
Osa03LNT0234400.1 osa-miR396a-3p Cleavage 5.0 9.654 1 20
Osa03LNT0234400.1 osa-miR396b-3p Cleavage 5.0 9.654 1 20
Osa03LNT0234400.1 osa-miR156l-3p Translation 5.0 16.84 1 22
Osa03LNT0234400.1 osa-miR159a.1 Cleavage 4.0 18.306 1 21
Osa03LNT0234400.1 osa-miR159a.1 Translation 5.0 12.498 1 21
Osa03LNT0234400.1 osa-miR159b Cleavage 4.0 18.306 1 21
Osa03LNT0234400.1 osa-miR159b Translation 5.0 12.498 1 21
Osa03LNT0234400.1 osa-miR159c Cleavage 4.5 18.306 1 21
Osa03LNT0234400.1 osa-miR159c Translation 4.0 12.498 1 21
Osa03LNT0234400.1 osa-miR159d Cleavage 4.5 18.306 1 21
Osa03LNT0234400.1 osa-miR159e Cleavage 4.5 18.306 1 21
Osa03LNT0234400.1 osa-miR159f Cleavage 3.5 18.306 1 21
Osa03LNT0234400.1 osa-miR159f Translation 5.0 12.498 1 21
Osa03LNT0234400.1 osa-miR319a-3p.2-3p Cleavage 4.0 17.751 1 20
Osa03LNT0234400.1 osa-miR319b Cleavage 4.0 17.751 1 20
Osa03LNT0234400.1 osa-miR167e-3p Cleavage 5.0 11.139 1 21
Osa03LNT0234400.1 osa-miR167i-3p Cleavage 5.0 11.139 1 21
Osa03LNT0234400.1 osa-miR169i-5p.2 Translation 3.0 11.838 1 22
Osa03LNT0234400.1 osa-miR171c-5p Cleavage 4.5 17.409 1 21
Osa03LNT0234400.1 osa-miR171f-5p Cleavage 3.5 16.87 1 21
Osa03LNT0234400.1 osa-miR171f-5p Translation 4.5 22.179 1 21
Osa03LNT0234400.1 osa-miR171f-5p Translation 4.5 16.041 1 21
Osa03LNT0234400.1 osa-miR171g Translation 4.5 19.755 1 21
Osa03LNT0234400.1 osa-miR172a Cleavage 3.5 16.526 1 21
Osa03LNT0234400.1 osa-miR172a Cleavage 3.5 17.061 1 21
Osa03LNT0234400.1 osa-miR172b Cleavage 4.0 16.526 1 21
Osa03LNT0234400.1 osa-miR172b Cleavage 4.0 17.061 1 21
Osa03LNT0234400.1 osa-miR172c Cleavage 4.5 16.526 1 21
Osa03LNT0234400.1 osa-miR172c Cleavage 4.5 17.061 1 21
Osa03LNT0234400.1 osa-miR172d-3p Cleavage 3.5 16.526 1 21
Osa03LNT0234400.1 osa-miR172d-3p Cleavage 3.5 17.061 1 21
Osa03LNT0234400.1 osa-miR419 Cleavage 4.5 15.22 1 21
Osa03LNT0234400.1 osa-miR426 Cleavage 5.0 13.688 1 21
Osa03LNT0234400.1 osa-miR426 Cleavage 4.5 18.506 1 21
Osa03LNT0234400.1 osa-miR426 Cleavage 4.5 18.374 1 21
Osa03LNT0234400.1 osa-miR444a-3p.2 Cleavage 5.0 23.766 1 21
Osa03LNT0234400.1 osa-miR1426 Cleavage 4.5 17.061 1 21
Osa03LNT0234400.1 osa-miR1426 Cleavage 5.0 18.223 1 21
Osa03LNT0234400.1 osa-miR1432-3p Cleavage 5.0 20.415 1 21
Osa03LNT0234400.1 osa-miR444d.3 Translation 5.0 12.431 1 21
Osa03LNT0234400.1 osa-miR444d.3 Translation 5.0 16.317 1 21
Osa03LNT0234400.1 osa-miR444d.3 Cleavage 4.5 16.623 1 21
Osa03LNT0234400.1 osa-miR444d.2 Cleavage 5.0 23.766 1 21
Osa03LNT0234400.1 osa-miR444e Cleavage 5.0 23.766 1 21
Osa03LNT0234400.1 osa-miR1846d-5p Translation 4.0 17.521 1 22
Osa03LNT0234400.1 osa-miR1855 Translation 4.0 20.66 1 21
Osa03LNT0234400.1 osa-miR1856 Cleavage 4.5 17.212 1 21
Osa03LNT0234400.1 osa-miR1858a Cleavage 3.0 12.076 1 21
Osa03LNT0234400.1 osa-miR1858a Translation 3.0 4.722 1 21
Osa03LNT0234400.1 osa-miR1858a Translation 4.0 19.887 1 21
Osa03LNT0234400.1 osa-miR1858b Cleavage 3.0 12.076 1 21
Osa03LNT0234400.1 osa-miR1858b Translation 3.0 4.722 1 21
Osa03LNT0234400.1 osa-miR1858b Translation 4.0 19.887 1 21
Osa03LNT0234400.1 osa-miR1869 Translation 4.5 9.227 1 24
Osa03LNT0234400.1 osa-miR1871 Translation 5.0 18.019 1 24
Osa03LNT0234400.1 osa-miR1875 Cleavage 4.0 20.214 1 24
Osa03LNT0234400.1 osa-miR1320-5p Translation 4.5 11.218 1 21
Osa03LNT0234400.1 osa-miR1320-5p Cleavage 5.0 15.665 1 21
Osa03LNT0234400.1 osa-miR2090 Translation 5.0 18.38 1 22
Osa03LNT0234400.1 osa-miR2098-3p Cleavage 4.5 13.012 1 20
Osa03LNT0234400.1 osa-miR2099-5p Cleavage 5.0 12.869 1 22
Osa03LNT0234400.1 osa-miR2122 Translation 5.0 24.119 1 22
Osa03LNT0234400.1 osa-miR2122 Translation 5.0 20.136 1 22
Osa03LNT0234400.1 osa-miR2275a Translation 4.5 15.929 1 22
Osa03LNT0234400.1 osa-miR2275b Translation 4.5 15.929 1 22
Osa03LNT0234400.1 osa-miR2871a-3p Cleavage 3.5 15.396 1 21
Osa03LNT0234400.1 osa-miR2871b Cleavage 3.5 15.396 1 21
Osa03LNT0234400.1 osa-miR2877 Cleavage 3.5 15.071 1 24
Osa03LNT0234400.1 osa-miR1863c Cleavage 5.0 17.048 1 24
Osa03LNT0234400.1 osa-miR5073 Cleavage 5.0 16.574 1 23
Osa03LNT0234400.1 osa-miR5081 Translation 4.5 13.596 1 22
Osa03LNT0234400.1 osa-miR5144-5p Cleavage 3.0 24.958 1 21
Osa03LNT0234400.1 osa-miR5144-5p Cleavage 4.0 15.725 1 21
Osa03LNT0234400.1 osa-miR5144-3p Translation 4.5 16.616 1 21
Osa03LNT0234400.1 osa-miR5151 Cleavage 4.0 12.034 1 22
Osa03LNT0234400.1 osa-miR5338 Cleavage 4.5 10.968 1 21
Osa03LNT0234400.1 osa-miR5490 Cleavage 4.5 14.672 1 21
Osa03LNT0234400.1 osa-miR5500 Cleavage 4.5 21.065 1 22
Osa03LNT0234400.1 osa-miR5513 Translation 4.5 21.134 1 21
Osa03LNT0234400.1 osa-miR1874-3p Cleavage 4.0 10.98 1 24
Osa03LNT0234400.1 osa-miR426 Translation 5.0 23.333 1 21
QTL
Transcript ID Chr QTL Gene Character Major Character Minor Marker Interval1 Marker Interval2
Osa03LNT0234400.1 3 nan Morphological trait Shoot/Seedling RZ403 RZ630
Osa03LNT0234400.1 3 nan Resistance or Tolerance Drought tolerance C136 R1618
Osa03LNT0234400.1 3 nan Resistance or Tolerance Drought tolerance C136 R1618
pre-miRNA
Transcript ID Pre-miRNA Identity(%) Alignment Length Pre-miRNA start Pre-miRNA end E-value Bitscore
GWAS
Transcript ID Chromosome Locus Trait Value Plus Minus