© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0235500.1
TCAAAGCGAACAGCGAAGCTTCAATTTAACAAATTCTATAGCAACCAGCTTGTTTCAGATAGTCGGTGACAAGAATTCACTGTCACCTCATCAGAATTTAGAAAGCGGTAAGTATTTCTGGCAGTGAAGTATCTTGATGGTAGAACTTTCACGGGCACATGCACCATCCATTAGATTGGCTGTCTGCTACCTCTATCAGTAATTCTGTATATACAAAACACTTTTAGTATCTCCCAGCATTAAGCTCTAACGTCAGGATCTAACGATGTCGATGTTTCGACATAGAACCAAGTAATGTGAGTTTTCTTTCCACCAAAATATGATACGGTAATTGTAAGCAATAGATCACATATGAACTCAACAGCAGCAGCAGCTGGCCTGTTTCTCACTCGTCATCACTGTCAAAAACAACCGTCTTTCTACGATTAAGAGGCTGTTTCCTTGGTGGAGATTCGTCGTCAGAGTTGAACCCTTTGCGCTCCTTTACATGCTCTTGTTCCTCATTATTTTCATCTGACATGGAAGTATCACCTATGACTTCTTCTGGGTCTTCTTCCTCTTCATCCATGTCATCTTCCCTTCCATTTGTTGGTGAATTATCTATATCCTCGACATCTGTTTCATACTCTGATTCCTCACTTTCACTCTTGGAATACTCATTCACCTGATGCTTGGGTACACTGGGAGAAGGAACAGCTTTCCCTACATTTGCCTTCTTTGCATTAGTTACGTGTCTCTTAGAAAGTGCTTCAGCCTCCAAGCTATCCTCAAAATGTGCATGGCCTGGGCCTCGGCGCTGATTATAACCAACACCAGGTGCCTCATCCTCCTCTAATGCATCTTCCAGAAAACCTGGGGTAAGCTTCCGCCTTTTCCTAAGAGGCTGACTGTATTTGCGCTTCACCTGTTCTCTTTTTCGTTGAAGACTTGAACTAGCTCGAATATTTTCTCCTTCAGCCTTTTCTCTTTCTTCCTTCACTTTCTCGGGATCATTTTCATCAATCCATGTTTGCATCTTGATTGTTTTCTTGTTTTGAGAATCAACAAGAGCAGTTAATAAGCGATGGGATCGTGAGGACAGTGAAGAAGGCATAAACCTCATCTTCTGTAGAAGCCTTCCTTGTGATTGCATAAGCCCCTTTCCATTCCTCAGAAACAGGTTGGAATTATCATGATTTGAGTCATTTACAGATATATCAAGAACTTCATTGCCAATCAGCAGTTGTATGCTTCCATCTTTCCACTTTACAAAACGTGCATTGCTTTCACGAGATTCGGTGCCATCAGCGTTCTTAACGATTTTCCAGCGGACAATATTATCCTCCAAGCGTATCTTTTTCCTGCTCCCAGATTCATCTGTCAAAGCATCCTCCTCCACATATGTTTCAGGATCAAAAGGTTTTGGATTAACCCCCATAATATTTGAAACCTTGATCACATTCATTCTGTCAGGTTGACCAGGTGGCAGCATACGTGGAACCACCAAATTCAGCGGAGGACCAAGTGGCTTATCTTTCAGTTCATGTTCAATATTTTCATCCGGTTCATAATGCTTATCTTCATCAACCATGTCCTCTGGAAGTAATTCCTCATAGGGGCCTTCATCATTCATAAGTGATTCATGGGCATGTTTATTGTCATCTCGAGAACCATATGGAGCAAGCCCATCCTCATCGTTATCATCAAAAGCATCATGGAGAACTTCATGGTCTTCTTCGTTCTCTGTTGACCTTGTTTCGCTGGTTATTGTTCTCTTGACATGACCTCCCTCTGCAGTATTCACGCCTTTCATGTGAACTTGTGTACTCTGATTGCCAAGTTCCACATCATGAGAGTCACCCTCAATTTCCTGGGCCATGCCACTTGACCCTTGGCTTTCACCTTGCCCTTCCTCCCATTGGTCGCCGCCGTGGCCGTTGTCCTCCAACCCGTACTCCTCGACCACCTCCGCCGCAGGGGACGCGAGGCGGCGGTCCTGCAGCTGGCCCCCATCCCCGCCGCCGCCGCCGCTACCGCGATCACCGCCACTCGTCGCATCGTCGCCGTCGTGCGCCAGGTACTCCTCCGGGTCCTCCTCCTCCTCCTCCTCCACCACCACCTCCTCGCCGGACTCGTCGCCGAAGATCTTCTGCATAATCTGGTTCCGCTCCTCCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0235500.1 | 3 | 31226801 | A | G |
| Osa03LNT0235500.1 | 3 | 31227021 | C | T |
| Osa03LNT0235500.1 | 3 | 31227024 | T | C |
| Osa03LNT0235500.1 | 3 | 31228715 | T | A |
| Osa03LNT0235500.1 | 3 | 31229539 | G | C |
| Osa03LNT0235500.1 | 3 | 31229574 | G | T |
| Osa03LNT0235500.1 | 3 | 31229668 | T | C |
| Osa03LNT0235500.1 | 3 | 31231250 | A | C |
| Osa03LNT0235500.1 | 3 | 31231274 | G | C |
| Osa03LNT0235500.1 | 3 | 31226951 | T | G |
| Osa03LNT0235500.1 | 3 | 31231605 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0235500.1 | osa-miR5816 | Translation | 4.5 | 8.104 | 1 | 24 |
| Osa03LNT0235500.1 | osa-miR6246 | Translation | 5.0 | 16.06 | 1 | 23 |
| Osa03LNT0235500.1 | osa-miR166g-5p | Translation | 4.5 | 17.918 | 1 | 21 |
| Osa03LNT0235500.1 | osa-miR1849 | Translation | 3.5 | 10.019 | 1 | 21 |
| Osa03LNT0235500.1 | osa-miR1877 | Cleavage | 4.5 | 20.165 | 1 | 24 |
| Osa03LNT0235500.1 | osa-miR2098-3p | Translation | 5.0 | 11.297 | 1 | 20 |
| Osa03LNT0235500.1 | osa-miR5340 | Cleavage | 4.5 | 13.907 | 1 | 23 |
| Osa03LNT0235500.1 | osa-miR5497 | Cleavage | 4.5 | 16.795 | 1 | 21 |
| Osa03LNT0235500.1 | osa-miR5508 | Cleavage | 4.5 | 15.458 | 1 | 21 |
| Osa03LNT0235500.1 | osa-miR5819 | Translation | 3.5 | 15.485 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0235500.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | C136 | R1618 |
| Osa03LNT0235500.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ403 | RZ630 |
| Osa03LNT0235500.1 | 3 | nan | Morphological trait | Panicle/flower | G249 | RG418 |
| Osa03LNT0235500.1 | 3 | QFll3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0235500.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | C136 | R1618 |
| Osa03LNT0235500.1 | 3 | qPES-3 | Morphological trait | Panicle/flower | G249 | G164 |
| Osa03LNT0235500.1 | 3 | qSBR-3 | Resistance or Tolerance | Sheath blight resistance | G249 | G164 |
| Osa03LNT0235500.1 | 3 | QSn3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)