© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0235700.1
TAATTAAAAACTCCAAAATTGATCTCAGTTGAAGTCACTTGGAATAAAGAACAAAAGGTTGAATGGTTGTCATTATACTACAGCACAACATTAATTTAGCATAAGTGTACATAGATATAGCTAGTAGTATATATCTACACCAACCTACATACACATTATAATGCAGAAGTAGTTAACATAGGTAGAGATTCTTCTGCCAAGAAGATACAGTCAGGGAATGCCTAGTGCTGCCAACTGCATACACAGACTACGGTTAATCGGGCACATAAAAGTTTGCCATGAAAAATACTCCACCGGCTGACCAATGAGGTTTGCAATCACTTGTAAGTCAGCTCTCCATCGTTGCAATAAGCTTAATTAATATATACTCCTAATTTCCAAGCCATTAATTGGTAGGTAATGACTGAGACGGTGGATTTCAGCAGGAGCTAATCAAAGAACCCTAGCTGCGTGATTTGCCTTCCTGCCAGCTGCCTCCATGCCAAGAGATGAGATGACACTTCAAATATCTAGTGTAGGGAGATAAGTCATGCATGTATATTTGAGTATTGTCATCCAAGTCTAACTCCAGGAGGCACAATATCATCAAGTAGCCCCTTGTCAAACGAAACAGCCGGAGGCACCGACGGCGACGGCGGCCGCTGCGCGATGGTCACCGCCGCCTGGGGGCTATTATTATAGCCAGGGCGTTGTAGCCCCTCGCTATTGTTCAGCTCCTGCAAAGACGTCGTCGTCGGCATCGAGCAGCTGACGGCGGTCTCGGAGGACGGCGGGTGCAACCGGGGTAAACCGTACAGCATATGCGGCTGTGGCGGCGGCGAGACGAACGCCGACATTTGCTCGGCGAGGGCGACGGCCGCCGCGCCGTGGATGTGCGCCGCGACGGCGGCGCCGCCGACGCCGCGCTGGAAGGAGGCGGTGTGGTGGCAGTGCTGGCCCTCGTAGGTGGTGATCACGACGGAAGGGTCGTCGGAAGACCGCTCCACGCGCTTCTTCACAGTGCACTTGCTGTTGGTGCACCTGTAGTAGCTCCTTGGGAATGGGCTGTTCTTGACCGCCTTTTGCCCATACTTCCTCCACCTGTAGCCATCCTCGAGGTGGTCAATCTCGCTCTTGGTCATGAACGCGAACCGCGGCTGCCTCGCCCTCTTCTGCCCCTTCTTCGCCGTCGCCGTCGCCGTCGCCGCCGCCGCCGGCGCTGCCTCGGCGGCGGCCGGTCGCTTGTCGGGGGCGGCGGGCTCCCCGCTAGAGCTCGACGACGCGGCGGCGGCGGCGCCGTCGCCCGATCTCGCCGGCGCCTCCTCCTCCTCCTCCTCCTCCTCCCGCGCCGCCGCCCCCACCACATCCACCGGCAGATCCAGCGCCGCCGGTACCATCATCCCCGCGCCGCCTTCCTCGCCCGGCGCCGCCCACCCGCCGAGCTCGGCCAGCACCGCCGACGAGTACTCCGCGAAGGCGGCGTCCCCGTCGAACGGCGACCACTCCGCTCCGGCCATGGCCGCCGCCGATCAACCACCGTGCCGTGCTACGGCTACCGATCGATCTCTTCTCCGGTGATCCGCTTGTAGAGGAGAGTGCAGTGAACTGCGGTGCACTGGGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0235700.1 | 3 | 31322043 | G | T |
| Osa03LNT0235700.1 | 3 | 31322843 | T | C |
| Osa03LNT0235700.1 | 3 | 31323038 | A | T |
| Osa03LNT0235700.1 | 3 | 31323659 | C | G |
| Osa03LNT0235700.1 | 3 | 31324308 | T | C |
| Osa03LNT0235700.1 | 3 | 31324781 | C | T |
| Osa03LNT0235700.1 | 3 | 31325654 | A | G |
| Osa03LNT0235700.1 | 3 | 31325847 | T | A |
| Osa03LNT0235700.1 | 3 | 31325860 | G | C |
| Osa03LNT0235700.1 | 3 | 31326370 | T | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0235700.1 | osa-miR816 | Cleavage | 5.0 | 22.869 | 1 | 20 |
| Osa03LNT0235700.1 | osa-miR1424 | Translation | 4.0 | 13.113 | 1 | 21 |
| Osa03LNT0235700.1 | osa-miR1435 | Translation | 4.0 | 15.3 | 1 | 20 |
| Osa03LNT0235700.1 | osa-miR3980a-5p | Translation | 4.5 | 24.94 | 1 | 21 |
| Osa03LNT0235700.1 | osa-miR3980b-5p | Translation | 4.5 | 24.94 | 1 | 21 |
| Osa03LNT0235700.1 | osa-miR5082 | Translation | 4.5 | 23.245 | 1 | 24 |
| Osa03LNT0235700.1 | osa-miR5496 | Cleavage | 5.0 | 15.378 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0235700.1 | 3 | QFll3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0235700.1 | 3 | QSn3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0235700.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | C136 | R1618 |
| Osa03LNT0235700.1 | 3 | qSBR-3 | Resistance or Tolerance | Sheath blight resistance | G249 | G164 |
| Osa03LNT0235700.1 | 3 | nan | Morphological trait | Panicle/flower | G249 | RG418 |
| Osa03LNT0235700.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | C136 | R1618 |
| Osa03LNT0235700.1 | 3 | qPES-3 | Morphological trait | Panicle/flower | G249 | G164 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)