© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0020900.1
CAAACAAATTATCAAAATTTAACATAAACTTACAATGCCTACCAAATCATCCTATAAATAATTCAATATAATTTGCACATATGCAAACAATTCTCATCCACACAAAATTCCAACCTCTAAATTAGCAACACACTTATCTCAGTCATACTTCGGGCTCAAAAGAACTCCTGATCTCCTAATCTCCAAATCATCTCGTAAAACTGACAAAAAGAAAGCGAGCCGGAGGAAGATAACCTTTCCTTATCAAATTGCTCACGAAATCCACTATAAAACGGATCTATATCAACCAGATTTGAAGAGATTTTGAGAGAGGAGCACAGCTTTCTTAGTTGGCTGCGAAGTGGAAGAAAGGCGCTGCGCAGCCCTCTTGAAGCTACACAGGAAATTTAGCCATCTTGCATGCCTTGCTTGCAGAAATATTTGTGCAAAGCTACATCATGATATAGGTGGCACATAAGTGAACACTACCTGGAGGTATCATTTCCCCATCATTTTTATTTTGCTCAGATTGTCTTGTAGCCATTTGTGTGAAAGATGAGAGCTAGAGATCTTCAGTATAGGCCTCAAAATTGAGATGTGATTCTGTTGCACAGTAACTAAGCATTTGATGTTGTAATGTGTAAACAAGTTTTATGTTGTGCAGGATGAGCCAACCAGCGAACAGATGTGACGAATAATATCAGTTGAAGCATTAGGACGAGCTGCACTTAATGCCTTCTGAGACATGTCCGACATCAATTTCTCATCACCGAAAACTTCATCAATTATAGATCTGAGACTACTAGAATCAAGTTCATCTTCTGTTATGACCTTTGCTCCCATGACATCAGCCATAATATATGCATTTTTGGTTTGATGGTCATCCACCATTGTTGGTAAGGGTATCAAAATTGATGGTTTCCCAGTGACCAGTACTTCAGTGCAACTCATAGAACCAGCTCGAGAAACTACAACATCAGCAGCAGCATATGCTTTGTCCAATTCATGCAAGAACGGGGTAAGAAGTAGCCGGCGGTGGCTCCTGACGAGGCTCTCCATCTCGCAGAACCCCTCCGGCCCTGTCTGCCATATGATGTACCTATTCCTCCTCTCTCTCAGCATCTCGTAGTACATGTTCAGCAACGCGACATTGATCTCCGGCGACCCCTCCGTACCACCAAGCACGAGCAGAACCTCCACCCCTTCCTCGCCCACAGTCCCAATCCTCGGGAAGAAACTCGCCATGGCGTCGGCCTTGGAGATCCGGCACTTGCGGATGGACATGCGGACGGGGTTCCCGTAGACGGCGCACTTGCGCTTGGGGAGGAGGCGGACGGGGGCGTTGAAGCCCAGGAAGATGCGGCGGGCGAGGGGCGCCAGAAGGCGGGTGGCGGGGGCCGGGCCGGCGTCCTGGTCCTGGATCACGAAGGGGACGCCGAGGAGGAGCGCGGCGAGGCAGGCCGGGAGTGCCGGTGCGCCGCCGGTGGCGACGAGCACGTGGGGGCGGAAGCGGCGGAGGTGCAGCGCCGCGTCGAGGACCGCGTGCGGGAGGCAGCGCGGGATGGGGGCGAACGGGTAGGGCGCGGAGGCGGCCGCGTCGGACTCGAGGGAGGGGGGCGGGGCGCCGAGGAAGAGGGAGGCGGAGGACGGGAGAGAGGCGTGGAGCTCGTCGGCGAGCGCGATCGCCGCGTAGACGTGGCCCCCCGCGCCGCCGCACGCGAACGCGACGCGGAGTGGGTCGGGGTCGGAGGCGGAGTCGGAGAGGCGGCAGCGGAGGTGGAGGGAGCGGGCGCGGCGGCGCGCGGGAGAGGGGGAGAGGGTGAGGCGTCTGGCGCCGCGGAGGCCGCGAGGTGGATCGTCCGGGCTGTTGTATTGGGTGAAGCGAGGTAGAAGCGGAGACCGCGGCAGCGGCAGCGGCAGCGGCCGCGGCGCGGGGCGGGCGGTGGCTGCCATTCCTTCCGGCGACGGCGGAATGGGGGAGCACGAGAGCGAGGGAGGGTGGCGCGGGCGCTTGTGAACGGGTGGGGTGGTACA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0020900.1 | 1 | 18298351 | T | C |
| Osa01LNT0020900.1 | 1 | 18299173 | C | A |
| Osa01LNT0020900.1 | 1 | 18299234 | C | T |
| Osa01LNT0020900.1 | 1 | 18299332 | C | G |
| Osa01LNT0020900.1 | 1 | 18299333 | C | T |
| Osa01LNT0020900.1 | 1 | 18300977 | T | C |
| Osa01LNT0020900.1 | 1 | 18301447 | A | G |
| Osa01LNT0020900.1 | 1 | 18301693 | T | A |
| Osa01LNT0020900.1 | 1 | 18301749 | G | A |
| Osa01LNT0020900.1 | 1 | 18302935 | A | G |
| Osa01LNT0020900.1 | 1 | 18303306 | C | G |
| Osa01LNT0020900.1 | 1 | 18303731 | C | G |
| Osa01LNT0020900.1 | 1 | 18303768 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0020900.1 | osa-miR156b-3p | Cleavage | 4.5 | 16.099 | 1 | 21 |
| Osa01LNT0020900.1 | osa-miR156f-3p | Translation | 4.5 | 16.099 | 1 | 22 |
| Osa01LNT0020900.1 | osa-miR156h-3p | Translation | 4.5 | 16.099 | 1 | 22 |
| Osa01LNT0020900.1 | osa-miR156l-3p | Translation | 4.5 | 16.099 | 1 | 22 |
| Osa01LNT0020900.1 | osa-miR528-3p | Translation | 4.5 | 16.025 | 1 | 21 |
| Osa01LNT0020900.1 | osa-miR2093-5p | Cleavage | 5.0 | 18.079 | 1 | 20 |
| Osa01LNT0020900.1 | osa-miR2101-5p | Cleavage | 4.0 | 15.72 | 1 | 22 |
| Osa01LNT0020900.1 | osa-miR2103 | Cleavage | 3.5 | 22.634 | 1 | 22 |
| Osa01LNT0020900.1 | osa-miR2103 | Translation | 5.0 | 16.725 | 1 | 22 |
| Osa01LNT0020900.1 | osa-miR2867-5p | Cleavage | 4.0 | 15.611 | 1 | 22 |
| Osa01LNT0020900.1 | osa-miR2867-3p | Cleavage | 5.0 | 20.22 | 1 | 20 |
| Osa01LNT0020900.1 | osa-miR2930 | Cleavage | 3.5 | 22.634 | 1 | 22 |
| Osa01LNT0020900.1 | osa-miR5148a | Translation | 5.0 | 14.599 | 1 | 24 |
| Osa01LNT0020900.1 | osa-miR5148b | Translation | 5.0 | 14.599 | 1 | 24 |
| Osa01LNT0020900.1 | osa-miR5148c | Translation | 5.0 | 14.599 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0020900.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0020900.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0020900.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0020900.1 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Osa01LNT0020900.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0020900.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0020900.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0020900.1 | 1 | qNVB-1-1 | Morphological trait | Culm/leaf | R2159 | C178 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)