© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0021000.3
ACCAGCAGCAGCAGCCGCCCAGTTTGAGCAGCAGCAGGAGTTCAGTTTCATAGCAGCAGCAGCGGTTCACTTTCATTTCAGCAACAGCAGCAGCAGCACAATTTCCAACAATAGCAGTATCATTCCAGAATCAACGACAGCATCATTCTAGCCAACAGCACCATTAAAGCATCACACAACCATCACCAAAATGAAGTCACCATTCTAGTTGCAGATCATTTATTCCTAATATTTAAAAAGGCCACTAAATTTATTTGTTCATTACACTCCTTTAATAATAAATAATCAGCAATGAACTGCAGCCTTGCAACGCAATCAACAAAACTGTGTGCTTCCGTCGGAATCATCTCAGGGCAGCCAGGTGCGCCACAGTTATGCTGCCCAGGGACGTCGCCCCAACGTTGAACTGCAGGAGGAGCTACTGACCACCAGACAGGGTAAACCACAACTCCATGATCTTCATCCAGGACCACTGGGTTGGTTCGACGCTGAGAAGTGCGCCGGCAAAGGACCAAGTGTTGTCTCATTAACGCTACCCTCGTTCTCGGCACCTTCCCGCATAAAATTTTCAAAGAAATCAATGACTTGCTGTGACCTCTCAAAACTCAAAGAAGCTTTGACTAAAGCCTCATTAGCTATGTTACGGAGAAGGCGGTACTGATCCATCTGTTCGGACCACTCATGCACATTTGCAGTTCTAATTGAAGGGAACGCTGCCTTCGCTTGCAATGTCCATCTAACCGCAACACAGCACTGAGGAATAATGTCAATTCGGAGATACTTCAGAACTGTAAATATATGTGAGCATGGTATCTCTTTGCTATCCATCATCTGACAGTAACACTTCACGCCCATCAACAATGCACCATCAAAACTACAACTCACTTCACCATGCACTTTATGGTCATATTTCGAAGCAATACTGTACCTTCGAGCCTCATCCAGTTGCCTCACCTCCAAAATCACCCATTTACAAATCTTCCGAATCTCTGCCCTTACCTCCCTGAAAATGACATGGGTGAAAAAGCGTGCAGCACTAATTTTAGTGAATGGTACCGATTGTGATGCTCTAGCATCCATCTCAGCCTCATTTCTACGCATACGCGACACACAGCACATGAAATGCTCTATGACATCGATCAGTGACATTTTCCTGTCGAGATGACTATGAATTCTTGAGTTCAAACCCTCACTCCTTTGATTGCTCCTCATCCCTAAGAAATATCTCCCATCGGTATACGCCGCGGCCCACTTTTCCCTTAGCGCATACATCATGGCTAGCCATAACTCCTTCTCCGGCACATTATCCCTGTTCTTAAAGGCACACCATCGTCTCTCAAATTCATCGGCCTTCATTACTTCGTAGACGAGTCTACGAAATTTGGTGAGCGCATCCCCATGGAGATGGCGTTTTGCGTTCTCCTCAATGTACCATGTACATAACCGATGATCTGCATCAGGACAGACCTTGGCGATGGCGTTTGCCATGGAAAGGTCCCCATCGGTGATAAACGATCTAGGATGCTTGCCACCCATCGCCTTAATGAAGGTCTCCAGCAGCCACACATATGAAGAAACCGTCTCATCTGAGAGCAGACAACACCCAAAGACAACCGTGCTACGGTGATGGTTTACACCAATAAAAGGAACAAAAGGAAGGTTGTACCGGTTGACACGGTAAGTGGCGTCAAAAACCACAACACCTCCAAATGCGTCATAGTTGATCCGAGATTGTGCATCGGCCTAGAACATATTCTTCAGATGACCTCCGGCATCAGTATTGTACTCAAAGAAAAATTCTGCATCTCTTTCCTTCTGTTCGTTCAAAAGGCTCAGTGCAAATTGAGTGTCCATACCCTCAATTCTTTCTTTCTTGTAACGAGCAACGAAGTTGTACAAGTCCCGAGACACAAACCCAACCTGATCATAACCACCATGATTCTTCTCCATGACGTCCATTATATTGCATGTACGAAGGCCACTGACCCCGAGTTCTACAACCTCAGCCTTTTGAGCATCACTTAGATTCCGATGGGATCATAAGAATGCCACTTGGTCATGCTTTGCAAGTGGGTGCGCATGACCATCGTTGAAATCTTTAACAAACCAAATCCCCATCTCCTCATTCAACTGTATCTCAAGTTTGGCCTCACATCCGCAACGTGTCAGGGCCCTTGGCTCCCTAATTTGGTCTGTTCTTTCAAAGTATTTCAACAACCTATAGCCTTCATATGAGCAGCACAAACGCCTCCAGACCACCTTACCATCTCCATTGTACCTAACATTGTCCTTTCTGATGCTAAAACCTTTCGACCAAGCATAATCATTATAGAACTTATATCCTTCATCCTCGCTTCTAAACTCCTTGGTTATCACACTCTCATACTCTGTGATCTCCTCCAAACTAATGTGATTGCCAGCCATGCCAAAATTTAGGGCCAAGAGAAAAGTAAAGTGAGGGGCGCCGTGGAGCGCGGGGGCGCAGGGGTGGCGCGGCGGCTCGAAAGGGGAGGGTCGCCGCGGGAGTGAGGGTGCAGGCGCGGCGCGGCGCCGCGAAAGGGGAGGGTCAACGCAGGCGCGGCGGCGCCAAAGGGGAGGGGCGCCGCGTCCGCGCGAGGGTGGAGGGGCGGCGCGGCGGCGTGAAAGGGGAGGAACGCCGCCTCCGCGAGAGGGTGGAGAGGTAGTGCGGCGGCGTGAAAGGTGAGGGACGCCGTGGCCGCGCGAGGGTGGCGGGGCGGAGCGGCGGCGTGAAAGGGGAGGAGCGCCACGGGCCGCGCGAAGGTGGCGGGGCGGGGCGGCGCAGCGGGGGGACGGAGAAGATGGAGGCCATAAACCCCCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0021000.3 | 1 | 18461664 | T | C |
| Osa01LNT0021000.3 | 1 | 18459298 | C | A |
| Osa01LNT0021000.3 | 1 | 18460421 | G | A |
| Osa01LNT0021000.3 | 1 | 18460478 | T | C |
| Osa01LNT0021000.3 | 1 | 18461608 | C | T |
| Osa01LNT0021000.3 | 1 | 18462052 | A | T |
| Osa01LNT0021000.3 | 1 | 18462087 | C | T |
| Osa01LNT0021000.3 | 1 | 18462436 | T | C |
| Osa01LNT0021000.3 | 1 | 18462857 | C | T |
| Osa01LNT0021000.3 | 1 | 18463359 | C | T |
| Osa01LNT0021000.3 | 1 | 18463500 | G | A |
| Osa01LNT0021000.3 | 1 | 18462074 | T | C |
| Osa01LNT0021000.3 | 1 | 18462702 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0021000.3 | osa-miR5808 | Cleavage | 5.0 | 20.405 | 1 | 24 |
| Osa01LNT0021000.3 | osa-miR397a | Cleavage | 4.5 | 12.063 | 1 | 21 |
| Osa01LNT0021000.3 | osa-miR397b | Cleavage | 5.0 | 12.063 | 1 | 21 |
| Osa01LNT0021000.3 | osa-miR171f-5p | Cleavage | 5.0 | 13.084 | 1 | 21 |
| Osa01LNT0021000.3 | osa-miR1426 | Translation | 5.0 | 16.63 | 1 | 21 |
| Osa01LNT0021000.3 | osa-miR2096-3p | Translation | 4.5 | 20.817 | 1 | 21 |
| Osa01LNT0021000.3 | osa-miR2873b | Cleavage | 4.5 | 9.979 | 1 | 21 |
| Osa01LNT0021000.3 | osa-miR2873b | Cleavage | 4.0 | 13.888 | 1 | 21 |
| Osa01LNT0021000.3 | osa-miR2873b | Cleavage | 5.0 | 10.67 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0021000.3 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0021000.3 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0021000.3 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0021000.3 | 1 | qNVB-1-1 | Morphological trait | Culm/leaf | R2159 | C178 |
| Osa01LNT0021000.3 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0021000.3 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0021000.3 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Osa01LNT0021000.3 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)