© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0236100.1
ACAAGAGCAAAATTTACCATCATACCGGTACAAACCACACAGGAATAATACATCAATTCACTTTCAATCAACACCGCATAAATTGACAAGGCTTGACGAGGAACAATGCATCATGCTTTCTATTTCTTTTACACTAAGATTTGAACATCATCTGACGCCCACTCTCCTTGTGTCTGAAACAGATCATCCGGAGCTAAGCCTACAACTATGGATGTTCATTTATCCGCGTTTTATAAATATGAAGGAGGTGCCTTCTTACATTACTGAGTACAGGAATTGCTGCCTTTTAACCAAGCATCTGCCACCAGGGCAGGCAAAAAAACTGATAGTCAGCCCATCTGCCAAAGGGTATTTGAGGCAAGGCGACGTCCAGCATAACAAAAATTAAGAGGAAATGTGGCTCAGCTCACATTGAAGCTCGGCCAAAAGAATGGATTGGTTTCTGGTCTGCCACAATAAATATTTCTCAGGAGATGCCTGCTGTGCAGTGAACTGCATCATGCTCAAAGACCGTATGTTATTTTCGATGGAGGCCAGTATCGAAGCACAGATCTGCCAAGAATGTTCTTCACAGGGAGAGGTCCCCAATTATGTGAATCGAAGCTGTTGTTTCTGTTGTCCCCCAGCACAAACACGTAACCTTGAGGAACAGTCACTTGATCCATTTCATAGTTGAGTGGCTCCAGCACAAATTCCTCATCCTGGACTACTCCATTAACCAATAATTTACCATCACGTACCATTCGGATAAAAGCTTACTTCAACGGTATCCCCACCCTTGGCCACAATTCTCTTGATGAATACATCTCCTGAACTGCACCCCAAGGCCTGCAGAACTGGGGGGGCACGGAAGATCACAATGTCCAAAATATTAGGCTCCCGGAAAACGTATGAAACCTTGTCGGCAAGGATTCGGTCACCAACATCGAATGTCGGATACATAGACTTGGATGGGATGGACCTTGGCTCAGCTAAGGATGATCTATATAACAGTGGCACAGTCACAGCGGCAAAGACAGTCTTGGCATCATCCGAACAGGAGCTCACCCACCTTGATAGCCAGTTCCTCCTGCTCACCTCTGCAGCAGCACCAAGTGCAGGACTGCTCTTTCTCACCATTCCAGCAGCACCGGAGTTAATTGCGCCACTACCAACCAATGGTTTCACGCCCACGCCCACATTAGAAGAGGCACCACTGGAGTTGATTACGCCGGAGTTGATTACACCACTACCAACCAATGCTTTCACGCCCACCTTAGAAGGGGCAGCCACCGCAGGCGAGGGCACATGTGCAGGACGGGGCGAAGGCGCAGGTGCAGGCTTAGTTCGTGACACAGGCGTAGCAGCAGGCGCAGCAGTGGGCGCTTTAGCTACATCAACTGGGCGAGCCGATTTGCGGGATGGCGCCGCGGAGGTGATGAGGTCACTGCAAGGGAGCCACTTGGTCGCCTGCAGGAATGGGAGGAGCGCCGCGGGGTTGAACGCTGACGATATTGACGGCGACGCCGAGAGCGATGAGGCGCCCACGCGGCCAGTAGCGGAGCCCATCCCGGAGGTGAACACCATCAGCAACCCGATGGCCAGCGATGATGGCGGGTCATTCACCGGAGCCTTCGTTGCGCACGACCGCGAGAGGAGCAGCGAATGGCCCCCTCCATTGGCGGCGATGGCGGAGGCGGCGGGGAGAGCCTTTGCCTTGGGCTTGGGCTTGGGCTTCGGATGGTTGTGATCGTCGGCGTCATGGTGGTACTCGGAGTGGCGGGAGGAAGCGAAGAGGCAGAAGGGGCGGGAGAGCGCGTCCTGGAGGAAGCGAGCCCCAGCCCCCGGCGCCGCACCGGAGGAGGCGGCGGCGGCGGCGGTGCAGCGCAGGCCAAAAGACGAGGCCAGGCTCTGCGCCACATAGCCGGAGTACGACATGGTGATGCGGATCGCCATCGCGAAGCTGGACTCCTAATCTCCGGGATCTTACTGGAGATCGTCGGTCACTTTCATACCGTCAGCCGGGACGGCGGCGGCGGCGGAGAGGGGCGCGGGGTATCGGGGGGATCTAGGGTTCTACCGAGTAGGAGGCGACCGCTACAGGGGTTCGTCGCGGTGGCAGCACGCAGATCGAGGATGCGGCGGTGGGAAGGGTAGGCCTCCGGAGATATGGGAAGTCGCCGCCGGTGGCGGCGGCGGCGGCGGAGGAGGCGAGTTGGGGGGAAGGAGAGAAGGTGGGAGATGGGGATGGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0236100.1 | 3 | 31682353 | A | T |
| Osa03LNT0236100.1 | 3 | 31683768 | G | A |
| Osa03LNT0236100.1 | 3 | 31684611 | T | C |
| Osa03LNT0236100.1 | 3 | 31684944 | C | G |
| Osa03LNT0236100.1 | 3 | 31684960 | A | C |
| Osa03LNT0236100.1 | 3 | 31682336 | G | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0236100.1 | osa-miR1431 | Cleavage | 5.0 | 23.61 | 1 | 21 |
| Osa03LNT0236100.1 | osa-miR2118b | Cleavage | 5.0 | 23.725 | 1 | 22 |
| Osa03LNT0236100.1 | osa-miR2118f | Cleavage | 5.0 | 23.725 | 1 | 22 |
| Osa03LNT0236100.1 | osa-miR2118j | Cleavage | 5.0 | 23.725 | 1 | 22 |
| Osa03LNT0236100.1 | osa-miR2118m | Cleavage | 5.0 | 23.725 | 1 | 22 |
| Osa03LNT0236100.1 | osa-miR2118n | Cleavage | 5.0 | 23.725 | 1 | 22 |
| Osa03LNT0236100.1 | osa-miR2863a | Cleavage | 4.5 | 18.743 | 1 | 21 |
| Osa03LNT0236100.1 | osa-miR2867-5p | Cleavage | 4.5 | 23.644 | 1 | 22 |
| Osa03LNT0236100.1 | osa-miR2924 | Cleavage | 4.5 | 16.362 | 1 | 21 |
| Osa03LNT0236100.1 | osa-miR166k-3p | Translation | 4.5 | 18.103 | 1 | 21 |
| Osa03LNT0236100.1 | osa-miR166l-3p | Translation | 4.5 | 18.103 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0236100.1 | 3 | nan | Morphological trait | Panicle/flower | G249 | RG418 |
| Osa03LNT0236100.1 | 3 | qSBR-3 | Resistance or Tolerance | Sheath blight resistance | G249 | G164 |
| Osa03LNT0236100.1 | 3 | qPES-3 | Morphological trait | Panicle/flower | G249 | G164 |
| Osa03LNT0236100.1 | 3 | QFll3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0236100.1 | 3 | QSn3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0236100.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | R1618 | G164 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)