© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0236300.1
CAAAGGATGCTTCTTTCTCATTTCTTCCCCTTTTACTGTTCATCTACAAAAATTTTTACAGGCAAAGATAAACACTACTCACACATCAACCCTACACAATCCTTACGTCTAAATCTATATGATACAATGCATATACTTCAGCTCATTTCACAGCCTATTTGAGCAGAGAGCAGTAAGATTAGTCAGTTCAGGTGAGGAAATGCCAGGTCCCTGGACAGCAGATACCGGAAATTCAGGTTATGAGGCACCCATTCTATGATCTTGCTGGATCTGCTCTGCTGGCACTTCTGCATTGCCATCCTCAAGCTCTCCGGGAGGTAGCGCTGCACCATGTCGACAAGGCCCTGCGACGAGAGCTTGACGTCTTTCGCATACGCCTCGACGAGCTTTGGAAGCAGTATTTTCTGCTCCTTCCAGATGCCCACCGTTGCCCGGATGAACTCCTCCTTGGCAGCCTCCAGTTGATGGAACAGCCTCTTTGGAGTGTACACTCTCACCGCGGGATCAGAATGGCTTCCTGAACAAAGCGCAAAGCGTAAAAGAGGCTCTGATTGTGCAACGGCAAAGGCTTGCCACACATGCCCTACTTTGCCCACTTTGCTTTTGATCCTTGGGTGAAGCAAAGTACGTAACCACTGTCCAGGACAGTATGTGTTGCATCCAAGAACCATGCTCTGGATAACAGCTACATTGATGCTCCGTCCAGCAATTTTGCAGGCAGCCTTAACAAGAAGTGATGTCTTCTTCAGATTGTTCTGTGGGACGCCATACTTTAGATAAGCATGCATCAGCTGGGCGTTGTGTATGTTGACCCAGAATGCAATCTTTTCTTCGTTCGTCATTCTCCTGAGATCGACGGTTTCCAACCGGTACAAAATCAACTTGTAAGTCTGGAGCAGATCCTCAACTTCTTTTAGCCTCCGACTATCGCGGCAAATCAGTGGAACCTCAACCATTGTATTGTATGGTCCACTGAACTCCTTCAACCCCTCAACATGGAAAGGGTTTATCAAACGAGAGTCCAGAGTAGATTCTCTCTTGTAATTGGGACTCCAGATATCCCCCAGATACTGCGGGGATATCGCACTCGTCGAGGAGAACGATGACGTTGGCGAAGACGACGAGCCGTGGTGAACCAAAGGGGGATCTGCAAGTTTGCAGTACACCCCTGCCATGCATCTCACCATCTCCTCCGATAGGTTGTTGGGAGTTTCAGGAATGTGGTCAGCTACATTAGTGCCTAGATACTCTGCTAAGCTTATCACTCCTGCTGCAGTACTCTCTCCTTCCTCCAGAAATGAGAAAGGTTGAGAGTGGCATGACCGAAGAGCTCTCGCAAGACTGTCCTCCGATGGTGAAATCCTGGACGAACAAATGCCGCGGTACGACACCGCAGACTGGCACCGGAGAACATCAGATTCACCTAGCCTGCTAGAGCAACCCGACGTAGAGCAATCCGTCATCACTGGATCGTTCAACGTCCTACGGGACGGTGGCGGGTAGCTGGATCGCAGCATTGCGTCAGCTCTGTTGTTCTTGCGAGATGCCTTGACACTGGGTGATTTCTGCAGCTGCACAGGCTGCGAGCTCACTGCCGCCATCGCCGGTACCGGCGGCTTCGGAGCTCCCCGGTGGTCAGGAGGGGAAAATGTGGGCACTTGCTGCTCAAAGGCCTTCCTGTACAGGGTAAGGAGATACTGCTCCATGTTCTTCACCTCAAGCTCTAGTGTAGCAATCTCCCTGATAAGTTCTTTGGCATCCTTTGGCATTGGATTCTCGTTTGATACGTTGACTGGAGCAGCAGTAGCGTTCGGTCCCAGAGCTTTCTCCAGGGCGCCACGCATGACCTGCTGATCCTTGAGGTGCTTTTCTAGCTGGAGAATCTCTTTTCTCAAGAAGCTCTGCGCTCCTCTCCCAGGTTGCACTTCAGCGTTGATATCACTTTTTACCTTAACTTTTACAGCATCTGGCTTAGGCTGAACGCATGTTTTATCTGAAGCATACAGCGCATCTTTAGCACACATATCCTCAAGATCACTCTTAGAACGCTTGTGCCTTTCTGAAGAACCGAAAGACTTAATTGCCTTAGCAAAGGCTCTGTGTCCCTTCTTCTCCATCGCCTCCACCTCCATTTCTTGGCACCAAGGTATGAACCAATCAAGAAAGAGATTAGTTGGCTGGTTCACAGAACTCGGAAGCAGGAAAGAGAAGAGACCCAACAACAAACAAGGAGAGCTCCAAATGATCCAAGAATGCAGAAATGTGGCTGCTTCTGAGCTCTGAAGCCACACTAGGCTCCAACAAAACCTGCACTGTGCTTGGCAACCAGTGTCAATGCCATCTACCGCCAACTAGCCCACTACTACCACCCTTCAGGTCAAAAACTAAATTGTTGTTTTTTCAGAGAGGGAATGGAAAGGTCTCTCCTTTCTCCACTCCAGCTCTGCAGAAACCCCGCACTCTGCGTTATATACAGCACAGCCACAACCAGTGACGCACACTAGTGTTTAGGGCGCCTTTTTTGCATCCACAGGTCTGAAAATTTTAATCCCTCCCGGCTTCTTTGTATTCTGCAGCTTGCAAAACTAGGAAAAGGTTAGCTTTTTTTTTTCTAACATCAGCTTGGTTATATGTGTCTTAGGCTTTCTACCTCAACCAACCTCGAGTAACAGTTTTTGGGGTTGTGAGCAGCAGTAAGATTGTGGGATTATATTAACTCAGGATTACTGCATCCAGCTGCTAATAGAGCCAAGCTTGCATACCTAACCGACAAAACATCAGCATTGTTAAATTAGGTTATTGTCTACCAAACTTGGTTGAGGGATTTCAGCATCAGAATATTAGTAGTATGTTGAAATTGCACTTTGGAGTTTGGGGTTCTTAATGGAACAGGCAGGTTTCCAGATGTGCCTGACATAGCTCTTCAGAAATCTTTGTGACCATAATAGTTTTTTCTGCCCTGCGATGAGTTTGTTTTATGATACTGACAGACCAGCAAATGAGCCGAGAGCAGGTAGTCTGCAGTGCCATTTGGAGAAGGGCATCATTATTGGTTTGTTTCAAATTAATCAGCGTACGTGCATACTAACCACCATGACTAATGACTAATGAGTCCACTTGTTAATACTCACTCGTCCTTCCACTATGGTCAACAATGATGCAAATTTCAATGCAAGCCAACTTCCCATTGGCTCATGTAGAGAAGACTAGAAATGGCCTGGAGATAGAGACACAACGATAGCGGAGAAAATATATAGTGCAAACCATCTGTATGTAATACAAACCTGAAAACTGTTATATGATACACAAATTATCATCTGAGATTTAGCCAATAAAAAAATAATCATACTTTAATCTAGAAGTAAAAGATTAATCAGGGGGACGTGAACAAATTCCAGACATCCATTTGTGTATCCTACAATAGTTTATAGGTTTACGCTACATATACTATCCCGTGATAGTACCACACATTGATTGTACAAACTAAAATTGGTTGGCATTTGGAAGTAAAGGGAACTCATCACTAATGCAACCAACCATCTCATATATTCCTTTTGCATTGCAAATTTGCAATGGGTTGGTGCAGCTATCTTGAATTCCTGACTCCTGAGTCTCAAGCAATCGTGATGTACCATAACACCTATATTACCCAAAGGTTGGCACTTGCCAATCCGTAAAATGTAGTACAGTTTTCGAGTCTGCATGCCGCTGTATACATAATTGTTTGTAAAATAAAAAGAGATACTCCCCTCCATTCAAAAATATTTTGGGACAGATGCAGTAGTTGTAAGTTAAAATAATGTTTTATACAGAACCCAATGTGACATTGTAAACATTTCATGCAACAATTTGAACACTAAACAAAACATTAAAAAAAAAGAGATGCACACATGATCCTCTGTACGATTTTTCAAAGAGAAGATACAAACTCTTATTCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0236300.1 | 3 | 31825679 | G | A |
| Osa03LNT0236300.1 | 3 | 31825570 | A | T |
| Osa03LNT0236300.1 | 3 | 31826278 | C | A |
| Osa03LNT0236300.1 | 3 | 31827725 | A | G |
| Osa03LNT0236300.1 | 3 | 31829271 | T | C |
| Osa03LNT0236300.1 | 3 | 31829469 | G | C |
| Osa03LNT0236300.1 | 3 | 31830810 | T | C |
| Osa03LNT0236300.1 | 3 | 31826026 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0236300.1 | osa-miR5807 | Cleavage | 4.5 | 14.873 | 1 | 24 |
| Osa03LNT0236300.1 | osa-miR5830 | Cleavage | 4.5 | 12.723 | 1 | 24 |
| Osa03LNT0236300.1 | osa-miR5516b | Translation | 4.5 | 15.097 | 1 | 21 |
| Osa03LNT0236300.1 | osa-miR818f | Translation | 5.0 | 21.791 | 1 | 21 |
| Osa03LNT0236300.1 | osa-miR159f | Translation | 4.0 | 11.085 | 1 | 21 |
| Osa03LNT0236300.1 | osa-miR319a-3p.2-3p | Cleavage | 5.0 | 5.335 | 1 | 20 |
| Osa03LNT0236300.1 | osa-miR319b | Cleavage | 5.0 | 5.335 | 1 | 20 |
| Osa03LNT0236300.1 | osa-miR1428a-5p | Translation | 4.5 | 18.463 | 1 | 21 |
| Osa03LNT0236300.1 | osa-miR1428a-5p | Translation | 5.0 | 15.287 | 1 | 21 |
| Osa03LNT0236300.1 | osa-miR810b.1 | Translation | 4.0 | 17.915 | 1 | 21 |
| Osa03LNT0236300.1 | osa-miR2094-3p | Translation | 5.0 | 20.272 | 1 | 22 |
| Osa03LNT0236300.1 | osa-miR2871a-3p | Cleavage | 3.5 | 18.066 | 1 | 21 |
| Osa03LNT0236300.1 | osa-miR2871b | Cleavage | 3.5 | 18.066 | 1 | 21 |
| Osa03LNT0236300.1 | osa-miR1863c | Translation | 5.0 | 22.414 | 1 | 24 |
| Osa03LNT0236300.1 | osa-miR1863b.2 | Translation | 5.0 | 22.357 | 1 | 23 |
| Osa03LNT0236300.1 | osa-miR2928 | Translation | 5.0 | 17.984 | 1 | 20 |
| Osa03LNT0236300.1 | osa-miR2928 | Cleavage | 5.0 | 21.813 | 1 | 20 |
| Osa03LNT0236300.1 | osa-miR5081 | Cleavage | 3.0 | 15.811 | 1 | 22 |
| Osa03LNT0236300.1 | osa-miR5339 | Cleavage | 4.5 | 20.648 | 1 | 21 |
| Osa03LNT0236300.1 | osa-miR5492 | Translation | 5.0 | 23.105 | 1 | 21 |
| Osa03LNT0236300.1 | osa-miR5499 | Cleavage | 4.5 | 13.077 | 1 | 21 |
| Osa03LNT0236300.1 | osa-miR5503 | Cleavage | 4.5 | 16.1 | 1 | 22 |
| Osa03LNT0236300.1 | osa-miR2098-3p | Cleavage | 5.0 | 16.493 | 1 | 20 |
| Osa03LNT0236300.1 | osa-miR5516a | Translation | 4.5 | 15.097 | 1 | 21 |
| Osa03LNT0236300.1 | osa-miR1863b.2 | Translation | 5.0 | 15.271 | 1 | 23 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0236300.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | R1618 | G164 |
| Osa03LNT0236300.1 | 3 | QFll3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0236300.1 | 3 | nan | Morphological trait | Panicle/flower | G249 | RG418 |
| Osa03LNT0236300.1 | 3 | qPES-3 | Morphological trait | Panicle/flower | G249 | G164 |
| Osa03LNT0236300.1 | 3 | qSBR-3 | Resistance or Tolerance | Sheath blight resistance | G249 | G164 |
| Osa03LNT0236300.1 | 3 | QSn3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)