© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0236500.1
ACACGGCAGTCATCAGAAGCTTTACTGTAACCAAGAGATTGTGTGAGCTTTTTGTACAGGGACACCACAATTTACACGACATACATGTAACATCTTAGTACAGCTCTTACTATATATCTTACACAGCAGAATGCGTCCCTCTTGACTGCAAAGAACAGCAAGTCCGCAGCTGTTGGATTTCCCACAAACAGCTTCACTTGGACAATGCAAACCCTCCTCTACAGCGAGATGCATCCTTGGTAGTACTTCACTAGCCAATATAGCAAGCGACGAGAGCAATGAACGGCGCCCAGAATTCACAGTTCTACATGATGGATGGGATTGAGTCATTCTTATCTGCCATGAAGAATGACAGGTTTCGAAACGCATCCAGGCTATTCACCATCATGCGATTCCAACTATTCTGACTGTCTCCTAAGAGTAAGTCCTCAGCTTGGTATCTCACGGATGGTATCTCTAAGTCCAGTGGTCCAAGTGAATCAGCCCAATATAAGTCAGCTAGAGATTGATCCTTTAACCCAGAATCACTTTTACTTCGAGGTGGAGAATTGGCACAAAGTGCCTCCATATCTTTGGCATCATCCATACAAGGATTATCAGCAACCTTTGCTCCTGCTAAGTCCTGAAGAAAGCCTTGAAACCCTTGTGAGGTTGAAGGAAGAACACCACTATCACTACCAGGACAGCTGCTAGCTGAAGTGTTTGAACTTTCTTGCTTCCTAGATGCTGCCAAGTTAAAACTGAACTCATCACAGGTTTCTTCAGCACCCCAGATGGTCGAATGGGATGCAAGGGCTGGCTGCTCTACTGTTTTATGACGAGAAGCGTGAAGAGCAACAGCAGCATCAAATGAATCATAGCTGCAGGGATTCTCAAGAAACAATGTGTTTTTGGCAATAGCTGTCCCTGGACAATCTGTATTAGTACCTATGGATGCTTCTGTTAGTAAGTATCCAACACTGATATCAGTAAGGGTATCTGCCCACTCTCCTTCAGATATTATAGCACAATCCATCCCCAGATTAGCCTCTAAAACTTGGTTTGTGGAATCTTTTTCTTGCTTCTGCCTGCTAAACCATGAGGCGGGAAAATCACTGTGCTGCTCTTGCCCCTTAGCGCTCTTGCCTGTACTAAATGTCATAGCAAGAAATAATGCCGGCCGATCTTTTGAATTACAAAGGTGTTCCTCAGGAGCACAACTATTGAGAAAAGTACCATCCTTCTGCACACAAGCGTCTGAGGGAGATTTGGCATGGATGTCTTCAGGCATCATGCAATTCTTAAAATGAGTTGAAGATATTCCACTTCCTCCTTCAAGCTCAGCAAGGGAAAACCAACCATACCTTAATCGAAAAACAGGCGGGCTATTCACAGAAAGAAAAACATCAGCCACCACAACTGTATCTCTTGTGGTCCATCTCTGATAGGTAGCTAAATCTTCTCGGTGAGCACAATATGGAAAAAGCAAAAGCTCTCCAGACGCAATGTTTGAGCTGCCCCACTTGCGGTTAAGATGTTCTAGTACAGAAGATATTTTTTTCCTAGCGCTAACTGTGAGTTCCAGATGTGGATTATGTTCATCCTTTTCCAATGCCTTTCGTGTGGCTTCATTGATTGGAAATAACTGCAATTTCAGCTTTGCAGGTGCTTGTTGATCTGCTTCATTCATACGATTTGTGCCTGGATCATCAACGGTACAAACATTGTTTGATGAGGGAGATAATGTCCTTGCATCAACATTCACTGTGTTGCGCTCAAGCTCTTCAGCTGCATCAGCGACTAAAGAAACACCAGCCATGGCATCTCTCTCCCATTTTTTATATGCAGTAGATGCAATGCCACCACCTGCTCTCCTTTTCTGTTTCACAGTAATTGTGGCAGAGAGGTCCCATTTAGTTGAACCTGACTTGTTATTGGAATTTGGTTCTGCACCCCTCTTGAAAACTGCCCCTTTTGAAGATGCTACTTTGCTACCATTTGAGACATCCACAGGTAGGAGTTTTACTGAGGAAGATTCATTTCCAGCAGTCCTGTTCAGAATTGGAGATGAAGAAGAAAGGCACTCATCCCCTCGTGGACACTTTTTTCTGGTTTTATTCCTGTCCTTTAGCAGTTGATTTCCCAATGCTTCTACGAATGTTTTGAATCTCCGAGGCTTCAGATGCAGTTTTGATGCACTGCAGCTAAATTTTTCAAGCAGAGACCACCAGCGGAGCATAGCAGCAACAGTGTCCTTTGAATTTTTTGCATCAAGTGAGAACTCAGGACCAAGAAGTTTCTTCATGCGTCGAACAAGACGATAGTAATAATGTCTGACCTGATCCTTGTTTTTGCTCTGGACACGGAGCGTGATCTTCTCAAAATTTTTTCCTTCCAGGCGCAGCGCATTGAAAAAGCTCTGTTCCTCTTGGCGTGTCCATGCCGCCCATTGCCGAGTCGGCTTCTCGGCAGAGGCAGGCCTCACTTGGGGCATAGAGCTCAGCTGAACCCCCAATTTTTCTTGATCCTTCGATTCGAACCGCGATGCGATGGAGGCCGGCGGCGTCGCCTCTGGATCCAAACCTGCTCGAGGAGGCTGCGATTGCGATGGAGACGAAGCTAGGGCATGCTCGCCGCCGGAGCTAGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0236500.1 | 3 | 32035223 | C | T |
| Osa03LNT0236500.1 | 3 | 32035535 | A | T |
| Osa03LNT0236500.1 | 3 | 32035881 | G | C |
| Osa03LNT0236500.1 | 3 | 32035892 | G | T |
| Osa03LNT0236500.1 | 3 | 32037086 | G | A |
| Osa03LNT0236500.1 | 3 | 32038263 | A | C |
| Osa03LNT0236500.1 | 3 | 32038426 | T | C |
| Osa03LNT0236500.1 | 3 | 32038866 | A | T |
| Osa03LNT0236500.1 | 3 | 32039923 | A | C |
| Osa03LNT0236500.1 | 3 | 32040639 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0236500.1 | osa-miR164a | Translation | 4.0 | 11.559 | 1 | 21 |
| Osa03LNT0236500.1 | osa-miR164b | Translation | 4.0 | 11.559 | 1 | 21 |
| Osa03LNT0236500.1 | osa-miR395b | Cleavage | 5.0 | 18.568 | 1 | 21 |
| Osa03LNT0236500.1 | osa-miR395d | Cleavage | 5.0 | 18.568 | 1 | 21 |
| Osa03LNT0236500.1 | osa-miR395e | Cleavage | 5.0 | 18.568 | 1 | 21 |
| Osa03LNT0236500.1 | osa-miR395g | Cleavage | 5.0 | 18.568 | 1 | 21 |
| Osa03LNT0236500.1 | osa-miR395h | Cleavage | 5.0 | 18.568 | 1 | 21 |
| Osa03LNT0236500.1 | osa-miR395i | Cleavage | 5.0 | 18.568 | 1 | 21 |
| Osa03LNT0236500.1 | osa-miR395j | Cleavage | 5.0 | 18.568 | 1 | 21 |
| Osa03LNT0236500.1 | osa-miR395k | Cleavage | 5.0 | 18.568 | 1 | 21 |
| Osa03LNT0236500.1 | osa-miR395l | Cleavage | 5.0 | 18.568 | 1 | 21 |
| Osa03LNT0236500.1 | osa-miR395s | Cleavage | 5.0 | 18.568 | 1 | 21 |
| Osa03LNT0236500.1 | osa-miR395u | Cleavage | 4.0 | 18.568 | 1 | 21 |
| Osa03LNT0236500.1 | osa-miR164d | Translation | 4.0 | 11.559 | 1 | 21 |
| Osa03LNT0236500.1 | osa-miR164f | Translation | 4.0 | 11.559 | 1 | 21 |
| Osa03LNT0236500.1 | osa-miR395m | Cleavage | 5.0 | 18.568 | 1 | 21 |
| Osa03LNT0236500.1 | osa-miR395n | Cleavage | 5.0 | 18.568 | 1 | 21 |
| Osa03LNT0236500.1 | osa-miR395p | Cleavage | 5.0 | 18.568 | 1 | 21 |
| Osa03LNT0236500.1 | osa-miR395q | Cleavage | 5.0 | 18.568 | 1 | 21 |
| Osa03LNT0236500.1 | osa-miR395r | Cleavage | 5.0 | 18.568 | 1 | 21 |
| Osa03LNT0236500.1 | osa-miR1435 | Translation | 4.5 | 20.366 | 1 | 20 |
| Osa03LNT0236500.1 | osa-miR1854-3p | Cleavage | 4.5 | 19.187 | 1 | 22 |
| Osa03LNT0236500.1 | osa-miR1861d | Cleavage | 4.5 | 16.59 | 1 | 22 |
| Osa03LNT0236500.1 | osa-miR1320-5p | Cleavage | 5.0 | 21.694 | 1 | 21 |
| Osa03LNT0236500.1 | osa-miR2872 | Cleavage | 4.5 | 18.156 | 1 | 21 |
| Osa03LNT0236500.1 | osa-miR395y | Cleavage | 5.0 | 18.568 | 1 | 21 |
| Osa03LNT0236500.1 | osa-miR5491 | Cleavage | 4.5 | 21.054 | 1 | 21 |
| Osa03LNT0236500.1 | osa-miR5524 | Cleavage | 4.5 | 14.015 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0236500.1 | 3 | nan | Morphological trait | Panicle/flower | G249 | RG418 |
| Osa03LNT0236500.1 | 3 | qSBR-3 | Resistance or Tolerance | Sheath blight resistance | G249 | G164 |
| Osa03LNT0236500.1 | 3 | qPES-3 | Morphological trait | Panicle/flower | G249 | G164 |
| Osa03LNT0236500.1 | 3 | QFll3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0236500.1 | 3 | QSn3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0236500.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | R1618 | G164 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)