© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0236800.1
CCATCAAGAACTTTTCCTTTAATTTCACTATAAGCTTGTTATTATGTACAAAAAGATATAGTTAAATTGCTGATCTGCTATGGCCGACTATAATTACACAAACCTTTCGCTTTCTTTTTTCAGCGGTAACTTGAAAAGAACAGGTGAACATTCACCAGATTAATCCCACACTTGCTTACAAAATTAACAGAAACTACAATGTTATTAGACGGTAAGAGCCACAGGACAAAAGATCATGCTCCTATCCAGATGCAAGCTGAAAATCTATTCAAGGAGACCGGGAGAACTCCTACAGCCCAAGCACATCGAACTCATGGGGCATGTAATCTTCGCTTGGACGGTAGTACTTGTTGGGAGAATACAAAGCAAAGTTTGTGACTTGACTACTGTAAAGGCACGCAAATCTCTCGACCTGATGAGCAAATCGGGAGTTTTGATAACCCGTCTTCATGAGTTGCCCCCACACTTTATGGAACTTATGATGATGTTGCCTTTGAGCCTCTTGATGAAGCCGACGAACATGTTCCTTCTTTTGCAGCAGAATGTCATGCTCCGAGAATAACTTTTCCTTCTCATCTTCTGTAAGATTTTCAAACTTGAGTGACCATTCAAGACGATGGATTTTATCTTCAATTGAATCACGCTCCATCCTAAGATGCCTAAGCTCCTTTCGAGTAGATTTTGATTCCGAAAGAAGTTTCACCTCTTGCTCTAGCTCTGGTATTACTAGCATTGTGCGCCAACCAAGGACTTTCTTGCTGCGCAGTATGTCTCCATAAATGTGATCTCCAACATATAAGATCTGAGAACTAGAAGCAACAGAAAGTAATCTGTGAAGATGACCAACATTTCCTCCCTGGTAAATTTTGTGGATTGGCCTTGAAGGCTGCTGACCTGATCTGGGGCTTCCAATATGAAGATCAGCATTTAAAAGCTTTCCAGAATCAGGCTCAACTTCAAACAGTCCAGCACGGTTACCATCATGGAAGAACCCTGGCTTTGCACTTCCTGTTATCACAACATCGAAATATCCAAGCCACTTGTGGTTGTGACTGGAGCTTACATCTGAGGTATATGGCCTACAGAGGTAGTTCATGACAACATCTGTGTAGTCCCACAGACTATTTGTCACCAAGAATGTTGAGCGCCCAGATTTTCTAATCATTTCAAGCATCGGTACAATGGCCAAGTCCTCGTTGATGTACCTGCTAGGATCCTTTGCGACCATTCTCTTTAATGTTCCATCACGATGGCACAAGTCAACAGCAGACCTCACATCTCCAATGAGAAAAGTGTATCTATGAGGGCATAGTCAGGCTCATCAAAGGAATCTCGTATCAATGTACTTCCATAAGCAGACACTTTTTCTTCTTTTGACATTTCCCTAAATCCATGATAAGCAACTTTCACATACTTGTGCCGATCCATCTTCAAGATATTCCCTCTCTTCTTATCAAGAACTAATCCTCTGACCATATATTTCCAGTCAAACTGCCATGTTAACAGCTCCTCAGGGTAGCCAAGGTCCTTGACAAGCTTCTCTATTGTGCCATGGTAAGCAAGAGCCTCAAATGTCTCGGGCTTGTACTGCGCAAGAGTGTAGTCCATATCAAATCCTACTGCAGTGATGTTCCTCATGTTGAGTGACCGGTTGCAGAATATCTCTTTCCCAACAGAAATGGTTCTAGGTTCCACTGATGGCGTTGACCATATTGCTCCTGTTGATGCTGGCTCCACCGCACCGGTCTCCATCCTTACAGCACTGCACCCTCTAGGGCCCGAGGCCGAAGAAGGCGACGCGGCGGATGAGCACGACGAGGAGGCGGAGGCGAAGAAGAGGAGGAGGGGAGGGGAGAAGGGCGCGAGGTGGCTGGCGGCGGTGGCGAGCGGCCTCCTGGCGAAGAGCATATCGCCCCCCCTTAAATAGGCGAAGGCGAAGGCGAGGCGACGCCGAGACGGGACGGGACGCGAGACACGAGTGCGACGAGGCGTCAGCGTGGGGCGCGTGGGAATAAATTGAGCAGTGGGTGTGAGTGGGGAGAGGAAGGAATGGAATCCAAACGGGCGGGGCGCGCGCGCGACGGCGCTGCTCGCCCTCACCCTTCACCGGCGCCGCGCGCCGCCGGGCATTGGCGGTGGTGGCCGGCGCCGCGGCGGGGGGCGGAGGGATCGCGTGAGGATTCCGATGCGATGCGAGGCTCGCGTGCGTTGGAAGCCAGCGAGCGACGGGAAGGGGAGGAGGTGGGGATG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0236800.1 | 3 | 32098014 | G | A |
| Osa03LNT0236800.1 | 3 | 32099391 | T | A |
| Osa03LNT0236800.1 | 3 | 32099487 | G | C |
| Osa03LNT0236800.1 | 3 | 32101117 | A | G |
| Osa03LNT0236800.1 | 3 | 32102033 | T | C |
| Osa03LNT0236800.1 | 3 | 32103212 | T | C |
| Osa03LNT0236800.1 | 3 | 32102151 | C | T |
| Osa03LNT0236800.1 | 3 | 32102495 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0236800.1 | osa-miR5833 | Translation | 3.5 | 21.472 | 1 | 21 |
| Osa03LNT0236800.1 | osa-miR159a.2 | Cleavage | 3.5 | 23.669 | 1 | 21 |
| Osa03LNT0236800.1 | osa-miR810b.2 | Cleavage | 5.0 | 12.768 | 1 | 21 |
| Osa03LNT0236800.1 | osa-miR2118b | Translation | 5.0 | 17.479 | 1 | 22 |
| Osa03LNT0236800.1 | osa-miR2118g | Translation | 5.0 | 17.479 | 1 | 22 |
| Osa03LNT0236800.1 | osa-miR2118i | Translation | 5.0 | 17.479 | 1 | 22 |
| Osa03LNT0236800.1 | osa-miR2118n | Translation | 5.0 | 17.479 | 1 | 22 |
| Osa03LNT0236800.1 | osa-miR5339 | Cleavage | 5.0 | 19.119 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0236800.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | R1618 | G164 |
| Osa03LNT0236800.1 | 3 | nan | Morphological trait | Panicle/flower | G249 | RG418 |
| Osa03LNT0236800.1 | 3 | qSBR-3 | Resistance or Tolerance | Sheath blight resistance | G249 | G164 |
| Osa03LNT0236800.1 | 3 | qPES-3 | Morphological trait | Panicle/flower | G249 | G164 |
| Osa03LNT0236800.1 | 3 | QFll3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0236800.1 | 3 | QSn3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)