© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0021100.2
GGAAAATGCACTTCAGTTATAAAAACGTTACACCATTTCACCAAATTTACATTGTTCTGAAGAAAATTATGTAGCACCAATTCCATTTAAGTTGTGTAAAATTTGAAGTGAACTTAATTTACCCTGTGATAAGTTTTCTCACACCACTAGCCTACAATACAAAACAGGCTAATTGTCTTGAGCTGTTACAGATCAATTATCTGTCTCGAGACCATAACGGTTATATCAAAATGTATGACCAGCCATCCCATATGTATCTTCAAGAAGTTGTCGTAATAAAATGTGGTCAATTACAAAAGTATCACAGCTTCCCATATGAATCTTCTGGATTTTCCTGAATGTCCTTATACTCTATGTCATGCCATTCGCACCACTTCTTCAGCCTCGGACAACAACAGATTACGGCAGTTTCAGGAGCAGCTGGCATCAAGTCCCGCAGCTGAAGTAGAGGGCAATGAAGAAGTTTCAAGCTTTCAAGGTCTCTAAAATTTCTTAATCCTCCAATGTACATGAATCCACGGCAGTCGGATATCTCAAGCTCCGTCAGAACTGCAGGGTTACATAAGTGCAGAGATAGAAGCTGATGGCACCCGCGAATTATCAAAGATGACAATAGATCTGGAAATTTTGTTCCAGTTGACATATCAAGTAAAGGACATTCAACCAAAACCAGTCCTCGAAGATTATTGAGATAATTCAAACCTATCAACGATTCAAGTTTAGCACAGTTCCTGATCTCTAGTCCCGAAAGCATCGAAAGACCCTTGTGGAAATTAAGAACACCAGAGAAAGTGCAAGAACTGAACTGCAAGAACCGCAAGTTAGATGGTAACCAGCTCTTGGTTGAGGAAAGCAGGTTTTGGCCTATCTGCGTGCAGTTCTCAATTGTCAAATGTTGAACGGCCACGAAATTCTTAACACCATATTCTGTGATCAATCGCACATCTGAAATATGCATCTTCCTAGTAACCTGAAAGTAGTTGAACTCATGTTTCTCGCACCACTGTTTCAGTTTAGGACAATCAGCGACAAATGCATGGCAAGGCTTGCACGGCATATTTTCTGAAGGAAGAATCAGGAGCTGAGGACAGTGGGAAATGTACAAGCTCATAAGGCAAGAAAGATTTTGTAGCCCCACCAAAGTACTCAGGTGAAAACAATCTCTGATATCAATAGTTTGGAGATTTGACGGCATATTACCTAGTGAAAACTGGATAATCTTGACAACAGATTTGCTTATTACCAAATTTCTCAGGGAGGTGAAACAAGGGATTCTGCTTAATTTCGAGCAGTTTCTTACAGTAAGAGACTGCAATTTCGAGCAATCTGAATTCTGCAATCCACACAAATCTTCCAGGTTGCACAAATTTTCGAGTTCTAAACTCTCCAAGGATGGAAATAGTGCATCTGGTTGCCATGTGCTGTTACTTTTGTTGTACCTGAAAGATGCATGATCCAAACGCCTGATGTTCGAAATGCCCACAAGTTGAAGATGTTGTAAGTTAAGGAGGCTTCTTATGTGTAAGGGTAGGTATGTAATGTTGCAGCAATGCTTCAAGCACAGTGTCCCTAAGCAATAAAGATCACTAAATTGATCCAACGATCCATCCATGAAGTCAAAAGAAACATGAAGGCATCTAAGACTGAAAAGATTCTGAAAGTTGCTTGACTTTAATATTCTCAAGGAGGAAATAATCAATGTCTCCAGGCTGTGAAGGCGACATACCGATTCAGGCAACTCTCTCATTTTGCAGTTCAGAGAAAGATAGCGCAAGTGTCTTAAATTGCCGATTGAATATACCATACCACTAACATCGTGGTTTGAATTCAGTATTAAAGACCTTAGATACATGAAACTGGATAATTCCATAAAATAACCAGAATGTTTTTTGTAGCAGCGGAAACAACAGTTTAACACGAGTGTTCTTACGGACCTCGGGTTGGGAAATTGAAGTTTCAGATCAGCTACTGGTGGCATACATGTCGTGCCAAACATTGCTGTACACTGTTCTCCTCTAGTAAATGATTTTGCAAGATCAAAAATAACATCATGCAACTTAAAGCGTCCAATTGACGTTGATGGTTTCTTCAAATAAGTTTCACACTGTAACTTGTTTTTCAAATAGAACATTGCTTCTCTTGCTTTTTCCTTTGACGAAAGTCCTTGTCTCCCTTCGTTTCTTGACGAAAATCCTTGTCTCTCTCTTTTTTTTGACGAAAATCCTTGTCTCTCATTATAAGTAAACCTGGAGAGACAAAGCTTCCGTTTGTTAATATCCCAACATACTGGTTTCCTATAAGTTTCAATCAATGATCTTGCGTGCAGTTCATTAAAATACTCATTTCCTATCTCCCGGCAAGTTTTCCCGTTTGTAGAGTAGATATAACCTTGAGCGACCCACAGCTGAATAATGTCATCCTTTGTAAATCCTAAATTTCTAGGGTACAATGAACAGAGAAGAAAACAAGGTTTCAATCTTGTTGGCAACCAGTAATAACTCAATCTAAGAGCTGGAAAGATGTTATCCTCTTCATCCAATTCCCAAAGCTCACTTTCCAATATTTCCATCCAGGCATGTTCATCCATTGTTGATCGTAAAAGGCAACCTAGTGACTTCACTGCTAACGGTAAGCCACCACATTTCTGCAAAATTTTCCTGCCAATCTGAACTAATATGGACTGTTCACTCTCATGTTGGTTTCCAAAAGCATAATGCTGAAACAACAACCAGCAATCCTTGTCAGGAATGCAGCCAAGATGATATAGCTGCACTGTTTGAACAAGACGTGCAACCTCTTTACTCCTGGTGGTGACCAAAATTGTCACTGTTTGTGCATGCCTGAGCGGAGATAGAAAATCCTGCCAGCTACTTTCACATTCATTCCACAAATCATCAAGCACGAAAAACAATTTCTTTCCTTGTACCTCTTCCAAGAGAACCCCATGAACTAAGCTTAGCTGTGTGAAGCCATAGTTTTTCATGGTTAATGACTCAGTAATGGCAATCGTCAACTTATGGACATCAAATGTTGGGGATACATGAATCCAACCACTATGCTCAAAATGTTTTCTGACACGACTGTCATTATATACCATCTGCGCTATGGTAGTTTTGCCAATACCACCCATTCCAACAATTGGCAAAACAACAATTCCAGATGGTTCCATGTCTTGATGAGATAATACTGACTTGATAATATCCTCCTTCTCATCAATCCTACCAAAAACAAGGGACTCATCAATAAGGTGGCTAGTAGGCCGTGACTTCATCCAGTTTCCCCTGTCAACAATTTTATGGCCATCTTCAAATCTGAGCTTGAGAGCATCTCGATCTCTGGATATCTCCTCGAAACGGTTTATCATCTCATTAATTCTCTCATCAATACTATCATTGTCCTCTTCATCATTATCCATGTGCTTCCGCTTGCGTGGATAATCACCTTGAAGCTCTTGGACTTGGCTCTGCAGCAGCTCATACCGGTAATCATCAAGGACATCCTCGGCATCAAGAGCCAAGTCCTTGAGCTCCTTAAGCCACAATTTAACATAGTTGTCCTGGAGCCCTTGCTCCTCAGCATCTTCAAGTGTGGCCTGGATGCGTGACAGCAGTCGCTTCAGTCGTTGCAGATCGGCAGATGCAGTGGGATGACCGCTCCGGGGATATAAATCTGACAACGGGCTTCGAAGAATTGCTAACAGGCTGCTGGTTGATGAAAGAAGAGATGACACTAATCCACTAGCCATAACTTGGAGTTTCACCTCTTCCTCAGTAAAAAAGATATGATTTTTCTTCAGGGTCCTTGGCTTAGGTCTTCAGTATTCTCCAATCCCCATTGACACAGGGGTGTCGAGATGATGCAGAACAAGTATAAGCACAATTGCTGCTCATATCAGTTCTTTGTGAATTTCATCCTTGGGTGAACAAGTACCCAACGCCAAATTTGTCTTATCGACTTAAGCCCTTAATGATTTGGGTGTGCGACAGTGACCCAAATCGCCCAAAAGAATTCCAATAGTTCCTGCTTAGGGACTAGGGCAACCCCTAGTACAGATTAAGGTCAAGGATACCCTGGGGCTTTCCGTCACGGCAGCCGCGCGCAGCGAGACCACAGTCACCACAGATATGGTCGGCCGCCTCCACGCCGTCGTACGAGTGCTCCGTTGATAGCCTAGCCGAGCCGCAGCGGCGTGGGACAATGGGATTTGCACACCCCGAGGCCGAGCAGCAGCATTAGGGACAAGTAGGGGTCCTTTTTTTTTTTGCGAGGAAGTAGGGAGAGGTATTTGTTCTGGTTTTGAGGCGTTCGATGCCAAAACGTGTATACAATCAAAGTTTTGGTAGTTGAAACAGTAACTTTGTGTTCAAATACGCACTCCTCAGTAACTTATCAATTTAGATCAAATCATTTGTGTTCGAATTCTTGTAGCCACCACTTTCATTAGTAAATTTTTTTAACTGCTTTAGATACTTTGATTTTGGTTCCATCCCTACCCTATCCACTTTACTTATTTTCTTAATTACATTTTCTAACAATTGCCAAGGACAAATTAGTCACCATTTTTTACTATATCGCTGCCTTATTCTATGTACTCTTCAACTCCAAACCCTCAACTTGCTCGTCTCTGTTAACATGCTTTTCAAACCTTTAAATGCATGATGTGTTTTTTTAAAAAAATTCCTATACAGAATGTCTACAAAATTCATATAAATCTATTTTTAAGTTTATAATAGATAATATTTAATTAATTATGTGCTAATGAGCTTTTTCGTTTTGCA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0021100.2 | 1 | 18531990 | G | A |
| Osa01LNT0021100.2 | 1 | 18532246 | A | T |
| Osa01LNT0021100.2 | 1 | 18537329 | C | A |
| Osa01LNT0021100.2 | 1 | 18537375 | T | C |
| Osa01LNT0021100.2 | 1 | 18539006 | C | T |
| Osa01LNT0021100.2 | 1 | 18539904 | T | C |
| Osa01LNT0021100.2 | 1 | 18540199 | C | T |
| Osa01LNT0021100.2 | 1 | 18540411 | A | T |
| Osa01LNT0021100.2 | 1 | 18540437 | T | A |
| Osa01LNT0021100.2 | 1 | 18540648 | T | G |
| Osa01LNT0021100.2 | 1 | 18541097 | A | C |
| Osa01LNT0021100.2 | 1 | 18541099 | T | A |
| Osa01LNT0021100.2 | 1 | 18535438 | A | T |
| Osa01LNT0021100.2 | 1 | 18540372 | A | G |
| Osa01LNT0021100.2 | 1 | 18535682 | T | C |
| Osa01LNT0021100.2 | 1 | 18532753 | C | A |
| Osa01LNT0021100.2 | 1 | 18533280 | G | T |
| Osa01LNT0021100.2 | 1 | 18535352 | T | C |
| Osa01LNT0021100.2 | 1 | 18537155 | T | G |
| Osa01LNT0021100.2 | 1 | 18537205 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0021100.2 | osa-miR5793 | Translation | 5.0 | 11.073 | 1 | 21 |
| Osa01LNT0021100.2 | osa-miR812t | Translation | 4.5 | 15.522 | 1 | 24 |
| Osa01LNT0021100.2 | osa-miR812u | Translation | 4.5 | 15.522 | 1 | 24 |
| Osa01LNT0021100.2 | osa-miR418 | Cleavage | 4.5 | 9.793 | 1 | 21 |
| Osa01LNT0021100.2 | osa-miR390-3p | Translation | 4.5 | 18.165 | 1 | 20 |
| Osa01LNT0021100.2 | osa-miR1858a | Cleavage | 5.0 | 18.601 | 1 | 21 |
| Osa01LNT0021100.2 | osa-miR1858b | Cleavage | 5.0 | 18.601 | 1 | 21 |
| Osa01LNT0021100.2 | osa-miR1861d | Cleavage | 3.0 | 18.871 | 1 | 22 |
| Osa01LNT0021100.2 | osa-miR1861d | Cleavage | 4.5 | 19.998 | 1 | 22 |
| Osa01LNT0021100.2 | osa-miR1861h | Cleavage | 4.0 | 18.871 | 1 | 22 |
| Osa01LNT0021100.2 | osa-miR1861j | Cleavage | 4.0 | 18.871 | 1 | 22 |
| Osa01LNT0021100.2 | osa-miR2121a | Translation | 4.0 | 9.344 | 1 | 24 |
| Osa01LNT0021100.2 | osa-miR2121b | Translation | 4.0 | 9.344 | 1 | 24 |
| Osa01LNT0021100.2 | osa-miR812n-3p | Translation | 4.5 | 15.522 | 1 | 24 |
| Osa01LNT0021100.2 | osa-miR812o-5p | Cleavage | 5.0 | 15.276 | 1 | 21 |
| Osa01LNT0021100.2 | osa-miR5083 | Cleavage | 5.0 | 22.14 | 1 | 20 |
| Osa01LNT0021100.2 | osa-miR5498 | Cleavage | 4.0 | 21.12 | 1 | 21 |
| Osa01LNT0021100.2 | osa-miR5498 | Cleavage | 5.0 | 24.629 | 1 | 21 |
| Osa01LNT0021100.2 | osa-miR5521 | Cleavage | 5.0 | 21.138 | 1 | 21 |
| Osa01LNT0021100.2 | osa-miR1438 | Translation | 5.0 | 16.398 | 1 | 22 |
| Osa01LNT0021100.2 | osa-miR2864.2 | Cleavage | 4.0 | 22.886 | 1 | 21 |
| Osa01LNT0021100.2 | osa-miR1862d | Cleavage | 4.5 | 18.911 | 1 | 24 |
| Osa01LNT0021100.2 | osa-miR5542 | Cleavage | 4.5 | 13.573 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0021100.2 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0021100.2 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0021100.2 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0021100.2 | 1 | qNVB-1-1 | Morphological trait | Culm/leaf | R2159 | C178 |
| Osa01LNT0021100.2 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0021100.2 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0021100.2 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0021100.2 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)