© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0237100.1
AGCCGCGCTCAATTGTTCCACTAACATAGAAAAGCTGCTCAAGCTGGCATAATTTAGTTTCTACATTATTGCCATTACATAATTTACAGCTAGATTGCTAGTACTATGGTACATGCTAGTATATCACAGCGTACATCACAGGAAATCCCAGACTGGAATGGTGTACTGGCTTTGATCCGTGGCTTGGTGACCCAGTTGAGGATTGCTGCTAAGAAACTGCAATGACTGGATGTCCGGAGGTGGGGCCTGGGGGATTTGTGGACCGCTATGAAAGGGTGGTTGCTGTAGATGAGGTTGCTGGAGAGGAGCAGGTGCTGGTTCCTGCAACTGCCCAAATGGTGATATGCCAGGAAATCCCTGAAGAGAGCTAAGTCCGAATTGCTGTGCAATATACGGTGCCTGCATTATATGGCTTGTTGCAAGAAATTGACTGGTTGGAGTTCTCAGATGATTTGGAATGTCATTTGATATTGTAGGAGGATCAACCCTAAGCGGAACTTCAGCCTCCTCAGGCTCCGGTAGACCTTGTCTACCCTTTTTCTTCTTATTTGATTGAAGAGGACTTTGCTGCTGCCGACGCGTATCTACATTTTTAATTTTCTTACTACTTACTCTGCGAGTTTCACTGTTGCTGGCTTCATTCGGAAACAAATTTGGCTGTTGAACTTTCAGTATAGTGCTCAATGAAGATTTATCATGTAACTTTGCTTGCAATAGAAGTTCAACTTGCTCTATAAACTGATCACATTGGCTCTCCATGTATGTATAAGCTTCAATATTTTCGGCAGCTTTTGCTGCAATTTTGTAGAACGTTCGATACAACATGCTGTATCGTTTAGACAACAAGAACCTGGGATCTTCATCTACAGCTTCAAAACCATAGTTCTCCCTCGGAGATTCACTCTGAGCATCCTTTCTCCATCTTTTCAAAATGTAGTGTGGTGGAAGTTCTTTAATATTTCTTACCTCAAGAACTTTCAGTACATGGCAACATGGAATACCTGTGAATTCAAATTTCTTACAGCTACAAACAACCATACATTCTGATGAGTCAAATCTAACAAAATGGTCACGGGGCCTGTTTTTGACAGTTACCTCATACTCAGATATTGGTCCAATCTCACCACAGCAATAAGCCATGCAAGTCAAGGTCAGTTCAAATTCCAACCTGAACATCTCAAAAAGTGTAGGAGTATATGCATTAGCAGCTTGCCAAAGCATCCGCAGAGGTGCTACTCTCTGTGCCATTTGAACCCCAAGGTAGTCAGCTTGTTGTTCAGCTAGGCGTTTGTTCTCCAAAAGTTTGTCATAATTGTTAAAGAAGGATGGGAAATCCGTTTCTTTCTTTAGAAGATCTGCCAGTATAGCATCAGTGTTATTATCACTTCGGAGTGCGGCTGCAATATCTGCACAGAATGAATCACGTCCATAAGGTAAAGCCCATCTTTCTCTATCTGCATACAATTTACCTAGCCACTCATTGTCCTTTAGATTGTACTTATCTGAGAGGATTTCCCAGCTTGACAAGAAATCCCCCTCCTCCTCATAGCCATACAACCACATGCTAAAATCGTCTGCAAAAGTTTCCGAGGCTTGGAAGGCATCCCTTAATATCTTAGTGGCATTTTTATATAAATGAATCAGTGAAAAGCGCTGGGTGGTCCTTGGCCAAACAGAAGCAACTGCTTCACTGATTGCTGTAGATTGATCGATCATAACTGTTTTTGGTTGCTTGCCACTCATTGCAGATTTGAAAGTTTCAAACAACCATTTGAAGGATTCAACTGATTCATCATAAACCAATGCTGCACCAAATATGACTGGCTGCTTATGATGGTTAACACCAATAAACAACAATAGAGGCCTACTATGATCACTTGTGCTATATCTTGTGTCAACACACAGTACATCACCAAAGTAGTGGTAATCCAGAATCGACTTAACATCTGCCCAGAATACATTTGTCAACTGGTCATCTTCATCCACTTGGATGGCATAAAAGAAAGAAGGATGTTCACCTTTCTTCCTCTGCAAATATTCATAAATTGCCTGGGTATCACCTAATTGCATATCTTTTGTGTGCCTTGTCCTTACATAATTTTTATAATCATTTGGTATCAAAACAACTCTTGGTGGATCTGGAGGCTGCTGTAACTTTGCTAATAACTTATGTGATCTCAGAACCTGGATGTCCACCAAAGGAGTTTCAAGATCATGATTATGATCAGCCACATACTCAGTCACTACATATTTGCCACTCACAGTGATTTTAATAGTCATGTGTGCCAGACAACCAGTTCTTGTTTCTGGCCGTGGCTTCTTGGGATCAGTACTGACACTTTTAGAGCGGAATCCCTCTTTAGAACAGACATATGCCCGAGATTTTGTAGTATTTGTTGCTGTTTTTTCCAACCATCCTTTTCGGACGCTGAACCCCACAGTTCCAGCATAGGTGACATAGCAGTCATAGGCCTTGTCTTCATTCAGGAAAACCATTCCAACTTTTGGTTCTCCTCCAGGTCCAGCAACTACTTCCATTTCTGGATCTGGTTCTCCTTCAATTATTTCATCTTCTTTACTCTCACCCTTATCTTCTTTTTTGAGATTTTGCTTTTCAAGACGTTTAGAGCGCCTTTCCGAAGGTTGCGTCAGTCCTTCGCTTGACAGAAATCTACCTCCATCACCACGTTTTCGTCTTTCAGCCAAAGCTTGATGTGAGGCGATCTTGGCAGGCCTTGCCGAAACAGGTCTGCTCTGTCGCTTTGAGAGGTACTTACTAACTATCTTCTTCCTCTCCTCATTAGTGTACTGTGATGCCCTCAAACCGAGTTCCCTCAGCACACGTGCCTGCAGGGCATTGCCCTCGGCATCTGCTTTCCTCGGCCTTCCCCTCCCTCTCTTTTCCTGCACTTCCACTTGTACCTCCTCTTCCATTTCCTCCTCCCCTTCCCCTTTCTGCTCCTCAACATCATCACCATCTTGCGCCACCACCTCGTCCTCCTTTTCGGCCTCCAATTCGACAACAGGCTTCTCATCCTTCTCTGTAACATCCTTTTTAGTCCTACCCCTCTTAGAACCCCTCATCTTGCGCGCCTCTTGCCCGTTATTTGGGACTGCTGTCCCGACACCCTTCTCCGCAGAGCTCTCCACTTCGATCACCTCTGAGTTATTTTTCACAGGGTTGGGATTCCTCTTATTATTGGCGCCCCTCTTCCTCTTGCCTGCAGCACCATCCTGCACCTCCTCCTCTTTCAACTCATCCAAACCATTTGCCTTGTTCCTCCGATTGGCGTAATTTCCTCTGGAGCAGAGGAACCTCTGCATGATCATGACGCCATTACCAACCGATCGGCGATTGGAGCCCGTGCGCGCCTTGAACCCCACCCTCTCGCCGTATCCGTAGTAGAACCCCTTGGCGGCGTGCACGGATTCGAACTCCATCCCCATCACCGGCACCGCCGCGGCCACCTCCCCCTCCCCCTCCCCGCACGGCGCCACCTCCACCTCGTGGTTGTGCTCCACCACCAGCTTCGACACCCTCCACTTCCCCCCGACCGCGTCCTTCTTCACCACCTCCATCATCGCCCTGCACCTCTCCTCCACCCCCACCCCCACCCCCACCCCCGCCGCCGACGAAGGCGCTGCCTCCTCCTCCTCCTCCTCCTCATCAGCATCAGCAGCGTCCCCGCCCTGACGGAGCGAGGGGTCCGCGTCCGCGGCGGCGGAGGCGGCGGCGTGGTCAGCCATGAGCGGGGGGGGCGAGGCGAGGCTAGGGTTGGGGGGGATTTGAAATGGCGCGGGGATTTGGGCGGCAAGCGGGCGGCGCGGGGGGATTATATAGTGATCGGAGATGGGAGGGGAGATCGGGTGTGGGGAGGAGGCGTCTTGCCTTGGCTGCGGCGGCCGGCGAGAGGAGGCGAGAGAGTGTGGGGGGAGCTGGGTGTGGA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0237100.1 | 3 | 32252524 | T | C |
| Osa03LNT0237100.1 | 3 | 32252104 | A | G |
| Osa03LNT0237100.1 | 3 | 32252552 | A | G |
| Osa03LNT0237100.1 | 3 | 32252818 | A | C |
| Osa03LNT0237100.1 | 3 | 32254823 | A | C |
| Osa03LNT0237100.1 | 3 | 32255332 | G | A |
| Osa03LNT0237100.1 | 3 | 32255688 | T | C |
| Osa03LNT0237100.1 | 3 | 32256018 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0237100.1 | osa-miR5531 | Cleavage | 4.5 | 20.481 | 1 | 22 |
| Osa03LNT0237100.1 | osa-miR5825 | Cleavage | 5.0 | 19.477 | 1 | 24 |
| Osa03LNT0237100.1 | osa-miR1437b-5p | Translation | 5.0 | 18.21 | 1 | 21 |
| Osa03LNT0237100.1 | osa-miR160c-3p | Translation | 5.0 | 22.81 | 1 | 21 |
| Osa03LNT0237100.1 | osa-miR397b | Cleavage | 5.0 | 13.63 | 1 | 21 |
| Osa03LNT0237100.1 | osa-miR164d | Cleavage | 4.5 | 11.144 | 1 | 21 |
| Osa03LNT0237100.1 | osa-miR167e-3p | Translation | 5.0 | 19.477 | 1 | 21 |
| Osa03LNT0237100.1 | osa-miR167i-3p | Translation | 5.0 | 19.477 | 1 | 21 |
| Osa03LNT0237100.1 | osa-miR172d-5p | Translation | 4.5 | 17.796 | 1 | 20 |
| Osa03LNT0237100.1 | osa-miR530-5p | Translation | 4.5 | 15.392 | 1 | 20 |
| Osa03LNT0237100.1 | osa-miR1428a-5p | Cleavage | 4.0 | 20.289 | 1 | 21 |
| Osa03LNT0237100.1 | osa-miR810b.2 | Translation | 5.0 | 15.288 | 1 | 21 |
| Osa03LNT0237100.1 | osa-miR1854-5p | Cleavage | 4.0 | 14.536 | 1 | 21 |
| Osa03LNT0237100.1 | osa-miR1858a | Cleavage | 3.5 | 4.945 | 1 | 21 |
| Osa03LNT0237100.1 | osa-miR1858a | Translation | 5.0 | 8.293 | 1 | 21 |
| Osa03LNT0237100.1 | osa-miR1858a | Translation | 4.5 | 2.013 | 1 | 21 |
| Osa03LNT0237100.1 | osa-miR1858b | Cleavage | 3.5 | 4.945 | 1 | 21 |
| Osa03LNT0237100.1 | osa-miR1858b | Translation | 5.0 | 8.293 | 1 | 21 |
| Osa03LNT0237100.1 | osa-miR1858b | Translation | 4.5 | 2.013 | 1 | 21 |
| Osa03LNT0237100.1 | osa-miR1874-5p | Translation | 4.0 | 22.994 | 1 | 24 |
| Osa03LNT0237100.1 | osa-miR2095-3p | Translation | 4.5 | 14.288 | 1 | 20 |
| Osa03LNT0237100.1 | osa-miR2101-3p | Cleavage | 5.0 | 12.581 | 1 | 22 |
| Osa03LNT0237100.1 | osa-miR2919 | Cleavage | 3.5 | 10.278 | 1 | 19 |
| Osa03LNT0237100.1 | osa-miR2919 | Cleavage | 3.5 | 1.374 | 1 | 19 |
| Osa03LNT0237100.1 | osa-miR2919 | Cleavage | 5.0 | 14.426 | 1 | 19 |
| Osa03LNT0237100.1 | osa-miR2922 | Cleavage | 4.5 | 16.131 | 1 | 20 |
| Osa03LNT0237100.1 | osa-miR2922 | Cleavage | 5.0 | 9.111 | 1 | 20 |
| Osa03LNT0237100.1 | osa-miR5523 | Translation | 4.5 | 12.925 | 1 | 22 |
| Osa03LNT0237100.1 | osa-miR5817 | Translation | 5.0 | 18.995 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0237100.1 | 3 | nan | Morphological trait | Panicle/flower | G249 | RG418 |
| Osa03LNT0237100.1 | 3 | qSBR-3 | Resistance or Tolerance | Sheath blight resistance | G249 | G164 |
| Osa03LNT0237100.1 | 3 | qPES-3 | Morphological trait | Panicle/flower | G249 | G164 |
| Osa03LNT0237100.1 | 3 | QFll3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0237100.1 | 3 | QSn3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0237100.1 | 3 | be1 | Others | Others | nan | nan |
| Osa03LNT0237100.1 | 3 | nan | Physiological trait | Flowering | R2404 | R2856 |
| Osa03LNT0237100.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | R1618 | G164 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)