© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0237600.1
TATATATGGGAGTTCGATTTTACGTTCCTTGAGGAGTTATCATGAGATACAAGAATTTAGTATCTTATAGCACCTAGAAATCGATAGATACCAAATTTACGATACCAAATTTACAATAGAAAAAGTGATACCTGATGGTATCTCCTCAAAAACCGTAAAATTGCTAATATATGGGGACATGGCTAAGATAGTAAGATGACAAAAAGATAAGGTGTTGCCGTGTTGGTTTTGCAAATTAATTAAGTTATTTCCTATGTTTCTTATTGCTATTAATCTGTCTAGCATTTAAATTTTGTGCCAAAATATTTTCTCATATTCCAAAGCACTTTAGACGTGATCTTTCCTCTCTACCCTTCATCAATGCAGGTATATATTAATAGAGTCACAATTTCCGTTGGATCATATGGTTTGAAAAAAAATAACTGGGATGTATTTAACGAGGATAACAATGTAGGTTTATGTGAAGTTTACTAGAATAATAAGTAATTCAAAACACAGGGACTATATTTGTTTTCACGTGATCTTGACATACGTATGTCAAATTTACGAACACTTTCATGTCTTCTAGTTACAACGAATTGATGCCATGGTGATCATATCGCAAAAGGCGTTTAAGGGGATATATGTGATGAACATGTCTGTGCATTAATCGTCGATTGGACCAATGCAACCACAGTGACTCAGTGAGTGGTGATGCTCTACATCGAATCGCTACATTAATTCAGGATTTGGGATTTTCAGAGAAGTTCTCGAGCAGGAAGTTGTATCAACGATACATGCCTTGCCTCCTGCTGGCGTCAGTCTTGAGCTGAGAGGAGGTCTATCACATTTGCTAGGATCATCTACACACCAGCCAATGCAGTCCATGTCAGCATTATTCAGATATACTGTTGTTGCTCCATCAAGCGAAAAGCTACCTGAAATTCTTCTCAAACAAGAAAATTCTCAAGAAATTCCCGTGAGGCTGATCCAGAATATCGTGGTAGAATTTCTCCTGGTTCCTTCCATTCCCAATATATGCCAAAAGAATTAAGCCCCTTGATACATCAATCATTTTCTCTTACACCTTACTTGATCAACCACTTGATTTGTTGTATTATTAGAGCAACGCTTCGATCACAGGAGTATCCGACTCAGGTGCAAGTTGTGTGCACATATATATAGAGACTGAAGCTGCGTCTAACTGGGCGCACGAAACGTTTGATGTTATCAGAGAAAGTGGGCAATTCTTTTTACTATCAGTAAAGCTAATATAGACTATTTATCTCTTTTTAATCCAATAAATTTTATTTTTTATTTATATTACCACATCTGCATCAACTACTACTAATAGTGGAGTCGTAAATCAATGGTCAAGATTACTTCTACTGATGATAACACTGGTGGTATTTTCCTAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0237600.1 | 3 | 32495549 | T | G |
| Osa03LNT0237600.1 | 3 | 32495320 | T | C |
| Osa03LNT0237600.1 | 3 | 32495323 | C | T |
| Transcript ID | Transposon ID | Chromosome | Strand | Start | End | Counts |
|---|---|---|---|---|---|---|
| Osa03LNT0237600.1 | DTM_#DNAt_MULE_japo_Os0067 | Chr3 | . | 32495308 | 32495458 | 150 |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0237600.1 | osa-miR5542 | Cleavage | 3.5 | 13.603 | 1 | 21 |
| Osa03LNT0237600.1 | osa-miR5790 | Cleavage | 5.0 | 14.942 | 1 | 24 |
| Osa03LNT0237600.1 | osa-miR5830 | Translation | 3.5 | 8.708 | 1 | 24 |
| Osa03LNT0237600.1 | osa-miR396c-3p | Cleavage | 3.5 | 11.661 | 1 | 21 |
| Osa03LNT0237600.1 | osa-miR159a.1 | Cleavage | 4.5 | 8.816 | 1 | 21 |
| Osa03LNT0237600.1 | osa-miR159b | Cleavage | 4.5 | 8.816 | 1 | 21 |
| Osa03LNT0237600.1 | osa-miR159c | Cleavage | 3.5 | 8.816 | 1 | 21 |
| Osa03LNT0237600.1 | osa-miR159d | Cleavage | 3.5 | 8.816 | 1 | 21 |
| Osa03LNT0237600.1 | osa-miR159e | Cleavage | 3.5 | 8.816 | 1 | 21 |
| Osa03LNT0237600.1 | osa-miR159f | Cleavage | 4.5 | 8.816 | 1 | 21 |
| Osa03LNT0237600.1 | osa-miR5337a | Cleavage | 3.0 | 14.897 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0237600.1 | 3 | nan | Morphological trait | Panicle/flower | G249 | RG418 |
| Osa03LNT0237600.1 | 3 | qSBR-3 | Resistance or Tolerance | Sheath blight resistance | G249 | G164 |
| Osa03LNT0237600.1 | 3 | qPES-3 | Morphological trait | Panicle/flower | G249 | G164 |
| Osa03LNT0237600.1 | 3 | QFll3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0237600.1 | 3 | QSn3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0237600.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | R1618 | G164 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)