© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0239000.1
GTTTGGAATAATTGGTTTCGTGCTATCGATGTGTTTGGCTGGCTTTCAGTTGCGCAGGTCGTTCGCCTTTTGGAGTGCACTCGTCATGTCGTCATCGCGCTGCGTTGCGTTCATAATTATGTTGGCTTGCATGCTTGCAATGATGCTTACCCCTCCTGCAACCGGCAACTGGCAAGCCATCCCGCTAGCTGATCGTTTTCTCCGCATGATTTGTAGTAGTACTGACCGGTTTACATCTACTACACGGCTACACCTTCATAAATCAGTTCCAGAAAGTTACGAATCGATGTACAATCTCTGTATACACTACATTTCATTGCATGTACAAATAACTTGATAAGAGTTCAGAACATGGATACTACTTCTATCGGTTGGATGTGGCAGAATACACGGGAAACTCTTCTGCCGTTTTTCATGGTAAAGAACAAAAGGTCGTACCTGCACTAGTGTACACTGCGGCTTCCATGTCCATGCTCTGACGGCACACAATCCTGACCTAACCACCAGTTAACAACCGCGGCAAGTCCGCTAATCCATGAGGCGTATATCTCCATGGAACCAATCATCAACTGATCACCCTAAACATACTATTCGGTAGGGTGATCAACATTGCAACGGCCAAGGTCAGCTGCAGCCTGATTCCCAATTCCCCTGCGCCGCTGAGTTCACGTAGAGGCGATTGGATGTCCTGCATTCAAGTAGGACCGATGCTTGGAGATAATCTCAATCGACTTTTGTTTGCTCATTATCTACACCGGGTGATTCATCCGGGAGGAGGCCCAGAAGAGGTAGAGGCAGCAGGGAGCTGAGATTGCACACGACAATCAGAAGAGCAAGGTTTTGGAAGTTGTCTTTGGTGACTCCCAAGAACTGCGTCAGGCCTGCCCCCAACAGACCACCGGTGACGCCTCCAGCGTTGGAAATGGACATCAGAGTGGCGAACAAAGTTGCTTCCACTCCAGGAGGGCAGAGCTTTGCAGCCAGCACCAACACGGGCATAAAGGAAGCCTGACCAAGGACAGTGATAATCAAGGAATCACCAATGGAGAACCATTCATCACTGATTCCAAGAACTCGATTGAGCCCAGTGACAAGAAGAACCTGTGTCATTCCAAGGGCAGAACCAAATATTGTAGTCACAAAAAAGATTTTTCTCAATGGAACTTCCTTCAAAAATGAATTATATACTCCTATGCCGACCAAGGATGCAATAGATGTAACGAGCGTGACACGCCCTAGAAACTCTGGAGTGAATCCAAGCTTATTTGTGATGAAGAAAAACATGGCAGAATCTGATTGTGGTGTTGCTTGCCAAAGGAATATGAACAAGGTGGGTAGGAAGATATTGGGTTGCTTTACTGAACTCCAAATCTGCATAATGTGCTCCTTAGAGCTCTCAATTAACCCTGAATCTGAAGATGAGGTAGCATTTTCTCCCAAAGGCAAACGCTTTTCATTCACAAGAACTGCAACAGTAGATGTCATGAGGGGCAAAAATGCCGTAACACCAAAGACAAATCTTACGCCATAAGTATCAACTAGAGAACCACTGAAGTATGCACTCATAACTCCTCCAATGGCTGATGACCCCCAACACAATGACTGGAGAGATCCAGATGTACTCTGTGGTTCACCACGAGCTCTCTCAACAACCATAGAGTCAACCACAACATCAGCGATGGCAACTGCGAGAGATCCAAGAATAATAGAGAGTGCTGCACTGTATTTATCATCCACAATTGTTGCCATCAAACTCCACGAAAGAGCTCCGAGGAGTCCTGATAGAATAAGGTAAGACCTTCTTCGATATCCAAAGAGAGGGATGGAATCACTGATAAAACCGTAAAGCGGCTTGACCAACCATGGCAACGCTGATAAACCAGATATAACTGCAGTCTCTGCTGGATCAAGATGAAGATCATCTTTTAAGTAAAAGCTCACAGCAAGCCTCGCAAGACCCAAAACTCCTTGCACGAAATAAACGATAGCAACAGCCACATTATCGGCGGACAAATCTACCCCAAATGCTTTGATGTATCTTGGCTTGGACTTGCTCCTGGAAATATCATCTGTACTATGTTGTCTCGTTTGCCACCTCTCAGAATCTCCATTGCTAGATGTTTCCCCAGGTCGGTTGTCCGAGGACGCGGCAGCGCCGTCGAGGTCCAGGGAACCGATAGCAGAAGCCGCAGCGGATTCCCCCTCAGAGCCGAGCCCCCCGGAGCTTCCTCCGCCGCCGCTGGACGCCATCTCCTGCGAGCGGCAGCGAGGCTCCGGCGGGCGGCGGCGGCGTACCGCGACTAGGTACGACGCGGCGGAGGGTCTGGCCGGTAGCGGGAGGGACGGCGGCGGCGGCGGCGGCGGCGGCGGCGAGAGCAGCAGCGAGCCGAAGGCCATCATCTCGTCGTCCACGCGAGCGCGTGGCGAGAGCTTCGCCTCCTCTGCTCCTCTCCTCTCCTTGCGTTTCCTCCGGACTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0239000.1 | 3 | 33065531 | T | G |
| Osa03LNT0239000.1 | 3 | 33065744 | G | A |
| Osa03LNT0239000.1 | 3 | 33065958 | G | A |
| Osa03LNT0239000.1 | 3 | 33066501 | T | C |
| Osa03LNT0239000.1 | 3 | 33067217 | T | A |
| Osa03LNT0239000.1 | 3 | 33067759 | T | C |
| Osa03LNT0239000.1 | 3 | 33068094 | G | A |
| Osa03LNT0239000.1 | 3 | 33068543 | G | A |
| Osa03LNT0239000.1 | 3 | 33069528 | A | G |
| Osa03LNT0239000.1 | 3 | 33070058 | C | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0239000.1 | osa-miR5535 | Cleavage | 4.5 | 18.702 | 1 | 22 |
| Osa03LNT0239000.1 | osa-miR395u | Cleavage | 4.5 | 18.202 | 1 | 21 |
| Osa03LNT0239000.1 | osa-miR171h | Translation | 5.0 | 17.222 | 1 | 21 |
| Osa03LNT0239000.1 | osa-miR418 | Cleavage | 4.5 | 16.164 | 1 | 21 |
| Osa03LNT0239000.1 | osa-miR1849 | Cleavage | 4.0 | 12.292 | 1 | 21 |
| Osa03LNT0239000.1 | osa-miR1865-5p | Cleavage | 4.5 | 16.118 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0239000.1 | 3 | qPES-3 | Morphological trait | Panicle/flower | G249 | G164 |
| Osa03LNT0239000.1 | 3 | QFll3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0239000.1 | 3 | QSn3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0239000.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | R1618 | G164 |
| Osa03LNT0239000.1 | 3 | nan | Morphological trait | Panicle/flower | G249 | RG418 |
| Osa03LNT0239000.1 | 3 | Qbp1 | Resistance or Tolerance | Insect resistance | R1925 | R2443 |
| Osa03LNT0239000.1 | 3 | qSBR-3 | Resistance or Tolerance | Sheath blight resistance | G249 | G164 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)