© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0239700.1
GCATCCTGAAGCGGCCAAGCCACACCAACAATGTTACTCATTTAGGCCTCGCGATTTCGCAAGCATATGTAGCCGGGGTGAAACAACAATGTGACAATGACTCAAAAAGAAGAAGAAAAATGGCAATCTAACACGCATACGCTAATACGCTATCAGTTGACGCGTGCCAGACATCAGTGCACACATCTCACCATGGTCTACAATCATCAGACTGGATCAGCTAATGGTAATTCTACAGCTGCACTTATGATGGACCATATCGTTTCTTCACTTGGTTCTTCCAAGTTGACAAAAGCACCTCCAATCAGGTTGACGCATGAATGATGTTGTATCGCTCTCTCATGGGTGCTCATTGGCCTCTGATGGATCAACAATGTTACTCAGTATCTAAACCCAAGGGCATGATCCTCAGTTGTTATCCAGGTGGTCGCCTTTCGCCGTTGCGACTCTGTGTTTCATCAAAACCGCCTACAGGCGCAACCTCGTTTAAGTCAAGAAATCTTCTCCCATCGCTTCCATTATTCCTGCTAGGAGAAAGCAGGGGTGGCCGCTCTTTATTTACTTCAGCACCTTCTTCCTCCTGGTCTTGACTAGTTGTCGAGAGCTCCATGTCATTTAGTGCATCAGAACCAGCATCTGGATCTGGTACCTTTATTTTACCTGGCTTTCCCAATTCTGTATCTGTGCCAGAAAGATCATACTGATGATACTTCATGTGTGGGCGGGTGGAACGCTTACTTCGTGTGATGCATGTTTGGAATCCATCGATAGTTCTCAAGTTGGTCCCTCGAGGATTGCAAGTAGCCAATCTTTTGTACCGTTGGGGCTCCTTTTCATCTTCACTGGTACTCGAAGGATATTCCACTTCATCATTACCATCATCGGCAACTTGTTCCAATTGGAACTCTTTATCGAGTTCTAAAAGTCTGGCCTTATATTGCTTTCGACTTCTAAGATATTCCTCATCATAGACTGCTTCACCAATGATATCATCATCACTGTCGAAGTTTGGGTCGACGTCCGAGATAGCCTCAACAAAATCTTGCGTGTACCTTCGAGATCTTTTTCTTTGCCTGCGATCGAGAGTCTCAGGTTTTTTCTCCCACTCACTTCCTTGGTAGCCATGTGACCTTAGTGGATATTCTCCATAGAATCCATTGCATAATGGCGAAGGACCAGCTAACCTACCATTGGTCGCTGTCTCTCGTTTTGGGTGTACTCTTCTGTTAGAAGTAGTAATGAACTCAGAAGAGTTCTCACTTTTCTTTGTTGGTTTTATGGCTTCATTTATTGAACGCTCATAATCATCAAAAGTATAGGTGACACGCTTTCTTTCACGACGAGAGCGGACAGAGGTGAACCCATTCACTGTCAAGCGGTTGTCAAGGAGGAGTGCTTCTCTTTGTTGCTTTTTGAGCAGCCTCTCCTTCTTCTTGTGAATCTTTTCCATCTCTGGAAGATAATTGTTCTTCAACTTCTTGCCAAGCGAGACCTCAGTCCTGTTCCTACTTGAAAAGAGTTTTTCTGCTGCTAATTCAAATTCAATAAAGTTGCATGCAACAGTCTCCCATTGATAGGATACAACTGGGGCATTTGAGATTCCCTTCCCTTTAGCTTTTTTGGTTGGGTCCTTCTCATACTCCACTTGCCTAATCTCACGATATAACCGATGTCCAAGGACGGGATCCTCGTCATACCAGTATGAGATTCCATATGAATCTCCTCCAATACGTTCTTTACGGAACACAGGAAGCTCATAACCACGCTTTAAAGAACTATCTATGAAGTTCCGAATATCCTCTTGCTCAACACGTATATCACATATTGCTTTAAGGATCACTAATCGTGTTGCTGGCTCAAGTGCCTTGTACATTTCAATTTCCGCACCGTGTGAGGCAACAATTGGAAGATCACCTTCTGCAACCCAATTCCACCAGTACTTCAATTTCCTGCATAACACTGTTATCCATGTTCCACGTCCCATAGCCATTCGAGTTACTGGAGGAATCGACTTCAGCAGAGGCATATGAACGTCATCCAATGTATTGTTGGGCGATAGGATCGCCTCCTCCAGCTCCTCCGCCGTGAACTCCACCGTAATGTTCAGCAATGGCCGGAACACGTGGAGGAAGTTGATGACGGAGGCGAGCTCCCACATGCCGCGCAGCCTCCACCGCGGCAGCTCCGCGGGCGCCTCGGGCTCCGCCACCAGCGGCGTCACCACGCGGCATTTCGGCGTCGTCTCCTCCTCCTCCCCCGCCGCCGCCCCCGCCGGCGGCCTCGCCCGCTCCTGCCGCGGCGGGGGCGGGGGAGGGGGAGGCACCTTGGGCCGGCTGTTGCACGCCCGCGGGAGCCGCGTCCTCCTCGGTGTCAGCTCCACCACCGCATCCTCCCCCTCCCCCTCCTCCCCCCGTCGCTGCTGCCGCCCCCGCGGCGGCGTTGCGGCCGCCATCGCCGCCGTTGCGGCCGCCATCGCCGCCGGGACACGTCGCCGGGTGCCGGATCGGCCGCCGCCGCGAGATCAGGGGTGGGTCAAGGGCTCGCCGCGGAATGGGCAGGTGGCGCCGTGGCCGCGGCAACCATTGGGGGCGAGGAGGGCAAGGAGAGAGGAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0239700.1 | 3 | 33496448 | G | T |
| Osa03LNT0239700.1 | 3 | 33496481 | C | G |
| Osa03LNT0239700.1 | 3 | 33494246 | A | G |
| Osa03LNT0239700.1 | 3 | 33494800 | T | C |
| Osa03LNT0239700.1 | 3 | 33496097 | A | G |
| Osa03LNT0239700.1 | 3 | 33496226 | C | T |
| Osa03LNT0239700.1 | 3 | 33496340 | A | G |
| Osa03LNT0239700.1 | 3 | 33496689 | T | C |
| Osa03LNT0239700.1 | 3 | 33497800 | G | A |
| Osa03LNT0239700.1 | 3 | 33498596 | G | A |
| Osa03LNT0239700.1 | 3 | 33498776 | G | A |
| Osa03LNT0239700.1 | 3 | 33497169 | C | T |
| Osa03LNT0239700.1 | 3 | 33499823 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0239700.1 | osa-miR5793 | Cleavage | 5.0 | 19.471 | 1 | 21 |
| Osa03LNT0239700.1 | osa-miR5806 | Cleavage | 5.0 | 13.841 | 1 | 21 |
| Osa03LNT0239700.1 | osa-miR5837.2 | Cleavage | 4.0 | 18.502 | 1 | 21 |
| Osa03LNT0239700.1 | osa-miR5837.2 | Translation | 5.0 | 14.921 | 1 | 21 |
| Osa03LNT0239700.1 | osa-miR156a | Cleavage | 4.5 | 23.28 | 1 | 20 |
| Osa03LNT0239700.1 | osa-miR156a | Cleavage | 5.0 | 22.748 | 1 | 20 |
| Osa03LNT0239700.1 | osa-miR156b-5p | Cleavage | 4.5 | 23.28 | 1 | 20 |
| Osa03LNT0239700.1 | osa-miR156b-5p | Cleavage | 5.0 | 22.748 | 1 | 20 |
| Osa03LNT0239700.1 | osa-miR156c-5p | Cleavage | 4.5 | 23.28 | 1 | 20 |
| Osa03LNT0239700.1 | osa-miR156c-5p | Cleavage | 5.0 | 22.748 | 1 | 20 |
| Osa03LNT0239700.1 | osa-miR156d | Cleavage | 4.5 | 23.28 | 1 | 20 |
| Osa03LNT0239700.1 | osa-miR156d | Cleavage | 5.0 | 22.748 | 1 | 20 |
| Osa03LNT0239700.1 | osa-miR156e | Cleavage | 4.5 | 23.28 | 1 | 20 |
| Osa03LNT0239700.1 | osa-miR156e | Cleavage | 5.0 | 22.748 | 1 | 20 |
| Osa03LNT0239700.1 | osa-miR156f-5p | Cleavage | 4.5 | 23.28 | 1 | 20 |
| Osa03LNT0239700.1 | osa-miR156f-5p | Cleavage | 5.0 | 22.748 | 1 | 20 |
| Osa03LNT0239700.1 | osa-miR156g-5p | Cleavage | 4.5 | 23.28 | 1 | 20 |
| Osa03LNT0239700.1 | osa-miR156g-5p | Cleavage | 5.0 | 22.748 | 1 | 20 |
| Osa03LNT0239700.1 | osa-miR156h-5p | Cleavage | 4.5 | 23.28 | 1 | 20 |
| Osa03LNT0239700.1 | osa-miR156h-5p | Cleavage | 5.0 | 22.748 | 1 | 20 |
| Osa03LNT0239700.1 | osa-miR156i | Cleavage | 4.5 | 23.28 | 1 | 20 |
| Osa03LNT0239700.1 | osa-miR156i | Cleavage | 5.0 | 22.748 | 1 | 20 |
| Osa03LNT0239700.1 | osa-miR156j-5p | Cleavage | 4.5 | 23.28 | 1 | 20 |
| Osa03LNT0239700.1 | osa-miR156j-5p | Cleavage | 5.0 | 22.748 | 1 | 20 |
| Osa03LNT0239700.1 | osa-miR156l-5p | Cleavage | 4.0 | 23.28 | 1 | 21 |
| Osa03LNT0239700.1 | osa-miR159c | Translation | 5.0 | 19.847 | 1 | 21 |
| Osa03LNT0239700.1 | osa-miR159d | Translation | 5.0 | 19.847 | 1 | 21 |
| Osa03LNT0239700.1 | osa-miR444b.2 | Cleavage | 4.0 | 17.684 | 1 | 21 |
| Osa03LNT0239700.1 | osa-miR444c.2 | Cleavage | 4.0 | 17.684 | 1 | 21 |
| Osa03LNT0239700.1 | osa-miR444f | Cleavage | 3.5 | 17.684 | 1 | 21 |
| Osa03LNT0239700.1 | osa-miR2121a | Translation | 4.5 | 18.039 | 1 | 24 |
| Osa03LNT0239700.1 | osa-miR2121b | Translation | 4.5 | 18.039 | 1 | 24 |
| Osa03LNT0239700.1 | osa-miR2863a | Translation | 5.0 | 12.687 | 1 | 21 |
| Osa03LNT0239700.1 | osa-miR5074 | Cleavage | 5.0 | 21.386 | 1 | 21 |
| Osa03LNT0239700.1 | osa-miR5522 | Cleavage | 4.5 | 16.339 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0239700.1 | 3 | nan | Morphological trait | Panicle/flower | G249 | RG418 |
| Osa03LNT0239700.1 | 3 | qSBR-3 | Resistance or Tolerance | Sheath blight resistance | G249 | G164 |
| Osa03LNT0239700.1 | 3 | qPES-3 | Morphological trait | Panicle/flower | G249 | G164 |
| Osa03LNT0239700.1 | 3 | QFll3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0239700.1 | 3 | QSn3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0239700.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | R1618 | G164 |
| Osa03LNT0239700.1 | 3 | Qbp1 | Resistance or Tolerance | Insect resistance | R1925 | R2443 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)