© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0240000.2
GTACAATTGCAATGGGACTTTTCATTATGATCAGGCACGTTCATGTATCAAGAACCTCGAACTGAAAACCGAGGCCACAAAGTTGGATGAATAGTTACAACAGCTAAAATTACAAGTTAGACGAGGTGATGTCCTATGACATGGCCGAGAACCATCGCGACAAGTAGTATATCCAGAAAGCATAGAATGAGCTTACTATGGAAAACCCTATGTTGGTAAATATGGAGCCAAACAAAACTGATATAGCGTATGTCAGATTGTACCTATTGAAGTAAAGGTGCAGTGGCAAAATCCCCACAACCTCCCTTCCTATTGAGTAAAGGCTTAGCCAAAGTTGCAGATCTCAATGGTTTACCTCACTTTGCAAATCCGAGTTACCTTCAAAGTAACGGCGTTTTGTTTGATATTGCTGTGGTATTATGAGGGCAAGATACACTGATTTGTTCAGGCAAAGTTTGTATGGATTCTTCAAAATGAGAACATTTGATTTGTCATTTGCTTTCTTTGAATCCTTCAGAACAACACGAGCAATGGTAAAGGCATTGCCTTTTTCTAATGCAAACTGCCATTCCCTCAATGTAATGTAGAACCAATTTTTGTATGAATTTGTTGTTGCCTTCACCTCCACATATTCTGTGAAACCCGATTTGTGTGTGACAACAATGTCATAAGGCAACCCCGTTTCATTTTCTTGATTCACCCACCTGACATTATTGGATCCAAAATGATCAACAAAATGTTGGTGGGCTGCAGCTTCCCCTTGCTTGCCAATTCTCAATAATTTGTCTCTGTCTGGAGCCTTTATGCAGAGCCTATCCCTCTTCTCCGAAACATTTGCCAGTTTATCATTGAATTCTGTTAGCTCAATATCCACCACTGAGTTTGCTGAGCTTCCGGTTTCTAAATCCAAATAAGCCGGCAAATTGGCAGAGTTAATCGACATCACCATATGAGGCTCATCGCCAGTTGCCCCTATACGTTCTGCAAGTACTGTATTTTCTGATCCAAAATCATCTTCTGTAATCCAATCCCCTTCAAGATCAACAGGACCCACAATATCTTCTGAGTTTTCACACTGAGTCTTGGTTAAGTCTAACGAAGGTACAACATTGTTCAAGTTTGTCTCTTGATTGGGTGTAAACTGGCTATTGTGAGATGTTATGAAATCTGGGGCTGTTTTCCAGTCGTTTGGTGGCCAACTTGAAGCAACTCCAGACGTTCTCTGATGCTTGGAAATATTGAGTTCACATGTAGATCGGATTTCAGTTTTCTGACTGTCACATATAGATTGGAATTCAGTTCTTTGGCAATCAACATCTTGGTCTGCTATGATCAAGGAAGAAAAGGACCAAACAGCTTCATGCTCAGGCAAATCAGGCACATTCTGATTATTAACGATAAAAGACTCTATTTGTTCAGCTGTGGTGCCAGAATCTGCCATGGTTTTGACCATGTGCAGAAAGTTCGCAAAGTGCAGATCAGGGGATCCATCAAAGAAAAGTCTAGACAGTTCCAGAAACAGTGAATGTGAATCAGCTTCTTGCGTAGCATATAGATTATTTCCCTGCAATAGGCAATTGCATTTGAATCTTCTCTTACAAGAACTCTCACGTTCTTTCAGCTTATACTTGTGGAATAACTTCTCAACAACAATAACTTGGAGATTGCTAAGCTTCGTGATTTCATTTTGTTGAAAGTTTACATATGTATCTCTATGCATCTTATAGATGTAGCGTTGCATATATGGTAATAGCCAAGAAATTACTGTAACCTTTTCTCTGTTATCCACTGTACCGTAAAATATTGCTTCACGATAAATAACCTTAGAAAGTGCAGGGATGCCTAGGCTTTTTAGCAATGCAGCAATTCTTCCATACAGCAGTTGCTTGTCTTCATAAGAAAGTTCTCCAAATTGTATGAAGTTAACACCATTGTAGTCCTCAAAGTGTTGCATCAACTCATTATCATCTACCCAGCAAACAAGGCCAAAAGAAGGATGGAGAGAGACCCATTTATCACCCAAGGTTGGCAGTATTGTTGTCTCCAACTTTTGAAGAGATCCTTCCAAGAACAATATATCATTCATATTGTCATTTGCAGAATGGAGATCATTAGCCCACCTCGCAAACACATGAAAGACCTGATTGGCTACTTCTGAAGGTAATGCAGCATTCGACAGCCCTAAAAGTATATCAACATAGTCAGATGTCTTGGGAACCTTTGGTACACCACATGCCTCAGTAAAGAATTCGCAAAGGCTGGGATAGGCTGAAGATAGCATCTTTCTTGGGAACATACTAATCTTATTCTTCATTGAAATGACTTTCTCTGTTATTATTTCAGAACAGCCTGTTGGGTCATGCCAATACAGATCTTTTGGGGACAAGAATTTTCCAGGAACAAAATCATTAGATCGAGCACGGTTTAATGGTGTAAATATAGAGGAGCAAGACAAAAACTCCCGTTTAATGTCAATCGTTGCAGTGGCAAAACCTTCTGACACAAAGGTGTAGAATTTGCACATCTGGTCCATACTTGCACTAAAAGAAGTCTGTGAAGCAATCCAGGATTTGAGGATCATCAAAGCATCACTATGTGATACCTTTATTTTGAATCCAATATCTTTCCCAAGTGATCTGCTGCATACCTGAGGTACAGCATATGGTGCCACACTACCAAGAATGGAACGCACATCTTCAGTATTATAAAATAAATCTGTTGCATAATGAAGGTCCTCATCCATAGCTGATGCTATCCATTTGAAGGTACGAATAGAATTCATAAAGGACGATTCAACTGCTATGTTTTCACCAGAATGTGTCGCATCTGCATGGATTCTAGCTTTTGCACTATAGTGAGCATCCCAGAATTTGTCAAGCACCTCCAGAAGATACACACAATTTTCTCGACATTTTTTGGAAGAAAATGTTGACAAAATGCTAACCAATTCTGGCGACTCCCAGTCATACACAATGCAGGGTGTTCCAGAATGATGACCTTGAGAAAGTCTTCCTGCAAGAGAAGAATCAGCCTGGGAAATATTTTTCTCAACTTTCACTACCTGAACAAAGTCAGTCACGCCCATCTCCTCAAAAAATTGCCTCCATTTTTTAAGTTCAAATGGTGGTAATGAATCTGAACCACGATTCATCAAATAGCAACTATCAAGTTCAATCCATTTTATTTCTACATTCAGAAGTAACTTGCATAAGTCCACAGAATTTCCATATTCTTTACTGAAGTGAATTGGTTCATCATATGGGCACTTGTAGCCATGGTTCGTAAGTAAGATAGGCCTCCTCCGTAGTTCTGACATTATCTCTTCTTTTTCAAAGTTACAGCTTGCACAAGGAGACTGAAGATGAAGCATTATAAAGCTCACATACTCTATCATCATTGTATTGGCCACATTAGCTTCTGTACTGTTAGACAAAGACACCAGGATGTGATTTTTTATAATATCATGTCCAGACAACTTCCGCACTCCCATCTTCAGCAGAATGTCCATCAGGTCGTTTGCTCGCATTTCTTCTGTGAGATACTTGTTTTGACAAGACACAGATAGAAGGCGGGGTTTTATTGTCCGAAGGTTACTATATAGAACAGGAAAGTTCAGCATACTACTTCTGGAATCAGGTTTTGAATTGAGAACATCATAAGGCAACCATATGGGTCCATCTGCTATAGAGCTAAATGAACCATCTGAAAGTGGAATACATGGTATTTTTCTGAGAGCACACAAAAGATCTTCAGGGCTTGTGGTTAATGGAAGATTTTTGGAAGAATGGTGCATCAATGATAAATGAAGAGAAATGAACCAAGCACATAGCCATTCCAGCCCCAGTGACTCAATACAACCATCAACTCGACAAATAGATGATATGATGTCAATCAAAACTTTTGGTCCATACTCATGAATACCTAGGGCCCTTGATAATGTATCAGATATGATTATATCTTTTGATAGGTACCCAAGACCAAGATGCTCCAGAAGTAAGCTATCAGAAATTAATATTCTAGTCTGTTCATCCCAACCTCGAAGAGTGTTGCATGGGTAGACCCATCGCGAACTAGAGCCCTCTAAAACCATGCAACGGGTGAGACGTAACTTTGAAAGGATCAAGTGAGGTAGCTGACAAAAGAATCCATGAACTTCTCCCACTAGAGGAACAAAACTCATGAAGGTTGTAACAGCCTTTCCAGGGCAACCCTGGAAGCAAGGAAGAGCACAAAAGGATTCTTGTGCACTGACAAACAAAGAAGGAAATTCAGACAGCAACCACTGGTTCCATGCATTATCAGCATCCACCTCCTCTCTGGAAGAAGGTAAGACAAAATCCCCTTGAAGAATGAATTTAAGACCATAATTCCTTAGAGGTAGAAAAGCAAATACGGGTTGTTGCTTCAAGTAAGGCTCATACTCCCCCATCTGAGTCTCCTGCAAAGTAAATGCCACAGCTATCTCTGTAGAGCACACATCATTGCGTACAATTGTGCCCTGTAACTTCTTGCTAACTACCAACCAACTCATCATATCATTCCCATTTGAAATTCTCACAATGCCGTTACCAAGGGCCTTCCTTCTCATAACCAATAGCGTATCATTCATCATGTTCTTAAACTTGATGCATTTTAGCCGATGAAGGAACAGGAGCAGAGATGGGTGGAGATCTGAAAACATGGATGCAATGGAGTGCATGCCGGTACCCTCCTTGAATTTTGATCTGAATGGAAGCACAATGCAAGTATTCCAGAAGGAAGAAGAGTCCTTGACATCTTCAACAGATAACATTCTACTTACAGAATCAGTATTGTAAGGTGCAACTGCAGTTGGCAATACAAAACCAATTTGGCCTTCTGTAATATCAAATTTCACGTGGAAACCATTTGAATGGATCTCGGGAGCATCAGTTACCCGAAATACTGATTTGAATCCAATGCCCTTATTTCCAATATAACCCTGGTTGGATCCTTTCTTTGTTGAGCTACCAATATCACAAAGTGCTCGAATATTTTCAGCGGAGAAGCCACTCTCGTTGTTGAGAACAACAATACCATTGTCTTGAAGAATAAATGCTAATGTGGGTTCAACATCCTCAACATAAGTATTATCATCAGCATTCAGCTCAAGAAGTAGGTGAGAATCCTGGGAGTATAGTTCTTGTGAGAGACAATGAAGTGCTCTGCCAAGTCGAGCATGCTGCTTTTTCAACAAACTATTTTCAGTGCAACTTAAGGACTGATCCAAACCAAATTCTTCACGGCGTATGGTCTCAATAACTAGAGTTGCTTCCTCAGGATTCACTTCTCCCAAGGTGGGAGATTTGTTAGTAATGAATTCTGCAGTATCAAGCTTTGCTGTGACGATATTTAATACATTTTGGTTTTTACTTACAGCAACAATTTGATTATCCTTGCCAGGCAATGACTTGCTCCTCTTCATTATATCAACATCAGTAGCATTAAGCAAGTTAGAGTTTTCGCATATAGCAACTCCAGATGCAGTTGATGGATGCCTAGAAGAAGCATGCATTTCTATATTTGCATGAATTTCGTCAGTTAAACATAATCTGCGACAATCTTCAGCCCATTCTGCTACTCCAAGTGATAACCCAATATCATGAAGCATGCACAGCTGCCCGGTTTCAGTGGCTTCAAGCAAGATGGCTGAATAGCAATTCTTCGTGATAGTTCGAAGTCCTGCCAATAAAACATCTGCTGCAAGACTCCGGAATTCGGAAGGTAGATGACCAAGACAGTCAAGTACAAATTTGGCAACCAGATGAACTATGTCGTCAATGTCTTTTGACATATCAGACCAAATGTTCCTTGCACTAAAGGATTTGCCTTCAGATTTAGTGTTCAGCAAATCATTACCGTTGTCCATTATGATGCCTATTGCTCGTTGTGCATAACACTTCAACAAGGAAATTGGAGTGTTGGTAGAACCATTATAAACATGTAGCAAGGAAAGCAGCTTCACTGCCACTTGGAATGGTGAACATTGAATAATGCCTTCTAAAAATTGGTCAACAGTAGCAGATGGATCAACTCTAATAAACCTACCATCTGTGGTCACGATGCAAGCTAGATCTTGAACTGGGCCTGTATTCAGCAACCAGTGCATGAAGGAACCCAGAGAGGGAGCAAACAACAAATCCCAATGCGACCAAGTAAGTAGATCTGACAGCATTGGAGCCTTAAGCAAACATTTAATTGCTTCTTGTGAGGAGACTGTTACAGAACAAGATTGTTGAATATCATTCATTAGCCCATCAACGGTATCATGGTTACCTGGAACAATACCAGACCACCGTTTCTCCAACAAAGACATAGAAAACATGATATTATTTATTTCTATGTTTTTCCTTTGTCTCTCAATAGAATCAAGAAGTCCTTCTCCAGATTTATCTTGCACAATATCAAAGCTAATAGTTGGAAATTGCCTTTTGAGAAGCTTAGAGAAACTATCCTCCGAAAACTCACCATCTTCAAGCCAATTACCCCCAGCTTGGCAGAGTAAAACCTCAATCTGTTGCTGCAGTACAGAAACTTCCACTGAAGAATGTGTTAACTTTCCGACTTTCAAGAAACTGCTCAACTTAGGGGGTAAATGTTGCTCATGTTTCCCCAAGAACTCGAGGAAAGTACCATGGCCAAGAGCGCTAAATTGGTTGGCTGAAAATTTAGCAGTTATGCATGTTTCACAATCGAGAAGTGTTCTCAAGAATGTAGATTTTCTCACTTGCGAAGCATCGGTTCTGGACACTCCACGATTGGACTCAAAAAATTCAGTAATTCTCCTGATTACATCATCAGCTGTGACACCTGCAGGAATATATGATAAACGTGAAAAAGGTGGTATTTCTTTGACTTAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0240000.2 | 3 | 33530324 | C | T |
| Osa03LNT0240000.2 | 3 | 33530876 | A | G |
| Osa03LNT0240000.2 | 3 | 33532207 | A | G |
| Osa03LNT0240000.2 | 3 | 33532974 | T | C |
| Osa03LNT0240000.2 | 3 | 33533311 | C | T |
| Osa03LNT0240000.2 | 3 | 33534523 | G | A |
| Osa03LNT0240000.2 | 3 | 33535098 | C | T |
| Osa03LNT0240000.2 | 3 | 33535334 | T | G |
| Osa03LNT0240000.2 | 3 | 33535804 | C | T |
| Osa03LNT0240000.2 | 3 | 33536689 | G | A |
| Osa03LNT0240000.2 | 3 | 33536695 | T | A |
| Osa03LNT0240000.2 | 3 | 33537447 | T | C |
| Osa03LNT0240000.2 | 3 | 33537511 | A | G |
| Osa03LNT0240000.2 | 3 | 33538711 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0240000.2 | osa-miR5543 | Cleavage | 2.5 | 11.869 | 1 | 21 |
| Osa03LNT0240000.2 | osa-miR5788 | Cleavage | 4.0 | 18.35 | 1 | 21 |
| Osa03LNT0240000.2 | osa-miR5813 | Cleavage | 5.0 | 16.774 | 1 | 22 |
| Osa03LNT0240000.2 | osa-miR1440b | Cleavage | 4.5 | 18.478 | 1 | 21 |
| Osa03LNT0240000.2 | osa-miR6254 | Translation | 4.5 | 18.364 | 1 | 21 |
| Osa03LNT0240000.2 | osa-miR5079b | Cleavage | 4.0 | 14.019 | 1 | 22 |
| Osa03LNT0240000.2 | osa-miR156a | Cleavage | 4.5 | 23.612 | 1 | 20 |
| Osa03LNT0240000.2 | osa-miR156b-5p | Cleavage | 4.5 | 23.612 | 1 | 20 |
| Osa03LNT0240000.2 | osa-miR156c-5p | Cleavage | 4.5 | 23.612 | 1 | 20 |
| Osa03LNT0240000.2 | osa-miR156d | Cleavage | 4.5 | 23.612 | 1 | 20 |
| Osa03LNT0240000.2 | osa-miR156e | Cleavage | 4.5 | 23.612 | 1 | 20 |
| Osa03LNT0240000.2 | osa-miR156f-5p | Cleavage | 4.5 | 23.612 | 1 | 20 |
| Osa03LNT0240000.2 | osa-miR156g-5p | Cleavage | 4.5 | 23.612 | 1 | 20 |
| Osa03LNT0240000.2 | osa-miR156h-5p | Cleavage | 4.5 | 23.612 | 1 | 20 |
| Osa03LNT0240000.2 | osa-miR156i | Cleavage | 4.5 | 23.612 | 1 | 20 |
| Osa03LNT0240000.2 | osa-miR156j-5p | Cleavage | 4.5 | 23.612 | 1 | 20 |
| Osa03LNT0240000.2 | osa-miR166a-5p | Cleavage | 4.0 | 11.486 | 1 | 21 |
| Osa03LNT0240000.2 | osa-miR166e-5p | Cleavage | 4.0 | 11.486 | 1 | 21 |
| Osa03LNT0240000.2 | osa-miR171c-5p | Translation | 4.5 | 17.543 | 1 | 21 |
| Osa03LNT0240000.2 | osa-miR171f-5p | Cleavage | 4.5 | 19.094 | 1 | 21 |
| Osa03LNT0240000.2 | osa-miR172c | Cleavage | 4.0 | 15.093 | 1 | 21 |
| Osa03LNT0240000.2 | osa-miR172c | Translation | 4.0 | 20.492 | 1 | 21 |
| Osa03LNT0240000.2 | osa-miR171i-5p | Cleavage | 4.5 | 19.359 | 1 | 21 |
| Osa03LNT0240000.2 | osa-miR419 | Cleavage | 5.0 | 10.932 | 1 | 21 |
| Osa03LNT0240000.2 | osa-miR419 | Translation | 4.5 | 13.469 | 1 | 21 |
| Osa03LNT0240000.2 | osa-miR437 | Cleavage | 5.0 | 12.214 | 1 | 21 |
| Osa03LNT0240000.2 | osa-miR1431 | Translation | 4.5 | 20.439 | 1 | 21 |
| Osa03LNT0240000.2 | osa-miR1852 | Cleavage | 5.0 | 11.629 | 1 | 21 |
| Osa03LNT0240000.2 | osa-miR1861g | Translation | 4.5 | 13.877 | 1 | 22 |
| Osa03LNT0240000.2 | osa-miR1877 | Cleavage | 4.5 | 14.932 | 1 | 24 |
| Osa03LNT0240000.2 | osa-miR2055 | Cleavage | 4.0 | 24.671 | 1 | 21 |
| Osa03LNT0240000.2 | osa-miR2090 | Cleavage | 4.5 | 13.983 | 1 | 22 |
| Osa03LNT0240000.2 | osa-miR2093-5p | Translation | 4.0 | 14.342 | 1 | 20 |
| Osa03LNT0240000.2 | osa-miR2095-3p | Translation | 4.5 | 19.292 | 1 | 20 |
| Osa03LNT0240000.2 | osa-miR2095-3p | Translation | 5.0 | 14.769 | 1 | 20 |
| Osa03LNT0240000.2 | osa-miR2923 | Translation | 5.0 | 15.06 | 1 | 22 |
| Osa03LNT0240000.2 | osa-miR2873b | Translation | 3.5 | 10.38 | 1 | 21 |
| Osa03LNT0240000.2 | osa-miR5076 | Cleavage | 4.0 | 13.995 | 1 | 22 |
| Osa03LNT0240000.2 | osa-miR5079a | Cleavage | 4.0 | 14.019 | 1 | 22 |
| Osa03LNT0240000.2 | osa-miR5157a-5p | Translation | 5.0 | 16.464 | 1 | 24 |
| Osa03LNT0240000.2 | osa-miR5157b-5p | Translation | 5.0 | 16.464 | 1 | 24 |
| Osa03LNT0240000.2 | osa-miR5488 | Translation | 5.0 | 10.969 | 1 | 21 |
| Osa03LNT0240000.2 | osa-miR5494 | Translation | 5.0 | 20.621 | 1 | 21 |
| Osa03LNT0240000.2 | osa-miR5498 | Cleavage | 4.5 | 12.771 | 1 | 21 |
| Osa03LNT0240000.2 | osa-miR5834 | Cleavage | 5.0 | 16.877 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0240000.2 | 3 | nan | Morphological trait | Panicle/flower | G249 | RG418 |
| Osa03LNT0240000.2 | 3 | qSBR-3 | Resistance or Tolerance | Sheath blight resistance | G249 | G164 |
| Osa03LNT0240000.2 | 3 | qPES-3 | Morphological trait | Panicle/flower | G249 | G164 |
| Osa03LNT0240000.2 | 3 | QFll3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0240000.2 | 3 | QSn3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0240000.2 | 3 | nan | Resistance or Tolerance | Drought tolerance | R1618 | G164 |
| Osa03LNT0240000.2 | 3 | Qbp1 | Resistance or Tolerance | Insect resistance | R1925 | R2443 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)