© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0240200.1
ACTCAATACCAATAGCATATATATCAGAGTTCCCACAAAAATTTCATGGGGTACCATGGTGGGATTGCGTTTATGGTGGGAAACAAAACTCAAAATGACTAATTGAAAAGAAGAATCTATGAGAACAGAACTTGTTGAATACTGAATTATTAATGAAGCTAGGTGATGTCTTTCTACAACAAGGCGGTTGAAAATTTACCCAAGAAAATGCAAGCTGAGAACCAAATTTGGAGTAATAACACCATCTACCAGGTATTGCCCTCAGGCCCTCGTCATATATGAATCATCTGCAGTACTAACAACAATTTTCTCACCGGCTTCTACAAAGGGTGGTACAAGCACTGTAAGACCATTATCCAGCAATACCCTTTTATATTGAGGCTGTGCAGTTATCCCTTTTGAATGAGGTTGTGCTTCAACAACCGTGCAAGTCACGCGTGGAGGCACTGATGCAGACATAGGTCGGCCATCAAAGTACTGCAGAGTCACCTTCATTTCATCTTTCAGATATGCTGCAGTTTTGCCAAACAGTTCCTTTGAGACCTCAAGTTGCTCAAACGTTTCAGGCTCCATAAGAGTCACATTGTCTCCTTCCTGATAAAGATATGTGAATGACTTCTCCTCAACAAAAACTCTCTCAAGAGCCTCATCGGTACGAAATCTTTCAGTTATTTTGTTGCCAGTGTCAACATCCCTCAATTCCACCTGTATAGTGGCTCCTCCTCTACCTTGATGTGAATGTTGTGCTTTTATCACCTGATAAATGCGACCTTGAAGGTTGACCAAAGGGATGGGATAAGTAGTAATCCACAATACTTGAAGGCAAAAATAAAACATAACTACATGTAAACACACACACCTCTTCTCTGTATTACGTTTCCAAGCTTCACTTCGGAGCCGAGCATCTTCGCGCCGCGGCGCTGGATGGCGGCCCACGGGGCGGCGGCGAGGGAGCCGGCGGTCTGGTCCCGCAGGACGGCGGCGAGGGTGGCGACGGCATGGGCGTGGCCGCGGTAGTGGGCGGTGGGCGCGGAGGGGAAGTAGAAGGGGAGGCGGCGGGAAGCTTCCAGAAGTTTCCGCCGGAGGATCTGCATCGCGGCGGCGGGCAGCCGGGAGTGGGGGAGTTCGCAGGTGGCGGGCTGGCGGCGAGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0240200.1 | 3 | 33689062 | T | C |
| Osa03LNT0240200.1 | 3 | 33689611 | A | G |
| Osa03LNT0240200.1 | 3 | 33689771 | A | G |
| Osa03LNT0240200.1 | 3 | 33689816 | T | C |
| Osa03LNT0240200.1 | 3 | 33690079 | A | C |
| Osa03LNT0240200.1 | 3 | 33691125 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0240200.1 | osa-miR6251 | Translation | 4.5 | 12.48 | 1 | 21 |
| Osa03LNT0240200.1 | osa-miR395b | Cleavage | 3.0 | 17.286 | 1 | 21 |
| Osa03LNT0240200.1 | osa-miR395d | Cleavage | 3.0 | 17.286 | 1 | 21 |
| Osa03LNT0240200.1 | osa-miR395e | Cleavage | 3.0 | 17.286 | 1 | 21 |
| Osa03LNT0240200.1 | osa-miR395g | Cleavage | 3.0 | 17.286 | 1 | 21 |
| Osa03LNT0240200.1 | osa-miR395h | Cleavage | 3.0 | 17.286 | 1 | 21 |
| Osa03LNT0240200.1 | osa-miR395i | Cleavage | 3.0 | 17.286 | 1 | 21 |
| Osa03LNT0240200.1 | osa-miR395j | Cleavage | 3.0 | 17.286 | 1 | 21 |
| Osa03LNT0240200.1 | osa-miR395k | Cleavage | 3.0 | 17.286 | 1 | 21 |
| Osa03LNT0240200.1 | osa-miR395l | Cleavage | 3.0 | 17.286 | 1 | 21 |
| Osa03LNT0240200.1 | osa-miR395s | Cleavage | 3.0 | 17.286 | 1 | 21 |
| Osa03LNT0240200.1 | osa-miR395t | Cleavage | 4.0 | 17.286 | 1 | 21 |
| Osa03LNT0240200.1 | osa-miR395c | Cleavage | 4.0 | 17.286 | 1 | 21 |
| Osa03LNT0240200.1 | osa-miR395c | Cleavage | 5.0 | 16.358 | 1 | 21 |
| Osa03LNT0240200.1 | osa-miR395a | Translation | 4.0 | 17.286 | 1 | 21 |
| Osa03LNT0240200.1 | osa-miR395f | Cleavage | 4.0 | 17.286 | 1 | 21 |
| Osa03LNT0240200.1 | osa-miR395f | Cleavage | 5.0 | 16.938 | 1 | 21 |
| Osa03LNT0240200.1 | osa-miR528-5p | Translation | 5.0 | 9.747 | 1 | 21 |
| Osa03LNT0240200.1 | osa-miR395m | Cleavage | 3.0 | 17.286 | 1 | 21 |
| Osa03LNT0240200.1 | osa-miR395n | Cleavage | 3.0 | 17.286 | 1 | 21 |
| Osa03LNT0240200.1 | osa-miR395o | Cleavage | 3.5 | 17.286 | 1 | 21 |
| Osa03LNT0240200.1 | osa-miR395o | Cleavage | 5.0 | 16.938 | 1 | 21 |
| Osa03LNT0240200.1 | osa-miR395o | Cleavage | 5.0 | 16.358 | 1 | 21 |
| Osa03LNT0240200.1 | osa-miR395p | Cleavage | 3.0 | 17.286 | 1 | 21 |
| Osa03LNT0240200.1 | osa-miR395q | Cleavage | 3.0 | 17.286 | 1 | 21 |
| Osa03LNT0240200.1 | osa-miR395v | Cleavage | 4.0 | 17.286 | 1 | 21 |
| Osa03LNT0240200.1 | osa-miR395w | Cleavage | 5.0 | 17.286 | 1 | 22 |
| Osa03LNT0240200.1 | osa-miR395w | Cleavage | 4.5 | 16.358 | 1 | 22 |
| Osa03LNT0240200.1 | osa-miR395r | Cleavage | 3.0 | 17.286 | 1 | 21 |
| Osa03LNT0240200.1 | osa-miR1857-5p | Translation | 3.5 | 14.16 | 1 | 21 |
| Osa03LNT0240200.1 | osa-miR2118a | Cleavage | 3.5 | 18.931 | 1 | 22 |
| Osa03LNT0240200.1 | osa-miR2118c | Cleavage | 3.5 | 18.931 | 1 | 22 |
| Osa03LNT0240200.1 | osa-miR2118d | Cleavage | 4.5 | 18.931 | 1 | 22 |
| Osa03LNT0240200.1 | osa-miR2118f | Cleavage | 3.5 | 18.931 | 1 | 22 |
| Osa03LNT0240200.1 | osa-miR2118g | Cleavage | 5.0 | 18.931 | 1 | 22 |
| Osa03LNT0240200.1 | osa-miR2118j | Cleavage | 3.5 | 18.931 | 1 | 22 |
| Osa03LNT0240200.1 | osa-miR2118m | Cleavage | 3.5 | 18.931 | 1 | 22 |
| Osa03LNT0240200.1 | osa-miR2118n | Cleavage | 3.0 | 18.931 | 1 | 22 |
| Osa03LNT0240200.1 | osa-miR2118p | Cleavage | 4.0 | 18.931 | 1 | 22 |
| Osa03LNT0240200.1 | osa-miR395y | Cleavage | 3.0 | 17.286 | 1 | 21 |
| Osa03LNT0240200.1 | osa-miR2118b | Cleavage | 3.0 | 18.931 | 1 | 22 |
| Osa03LNT0240200.1 | osa-miR2118h | Cleavage | 4.0 | 18.931 | 1 | 22 |
| Osa03LNT0240200.1 | osa-miR2118q | Cleavage | 3.5 | 18.931 | 1 | 22 |
| Osa03LNT0240200.1 | osa-miR2118k | Cleavage | 4.0 | 18.931 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0240200.1 | 3 | qSBR-3 | Resistance or Tolerance | Sheath blight resistance | G249 | G164 |
| Osa03LNT0240200.1 | 3 | qPES-3 | Morphological trait | Panicle/flower | G249 | G164 |
| Osa03LNT0240200.1 | 3 | QFll3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0240200.1 | 3 | QSn3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0240200.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | R1618 | G164 |
| Osa03LNT0240200.1 | 3 | Qbp1 | Resistance or Tolerance | Insect resistance | R1925 | R2443 |
| Osa03LNT0240200.1 | 3 | nan | Morphological trait | Panicle/flower | G249 | RG418 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)