© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0240300.1
TGCCATTGTTGCTCTTTGATGAGCCTTTGATGAGATCAAATATGGCCTCATGATGCTTTTGTAACACAATGTACTCTATTGCTATCTGAGGAGCAGCAAGCTCACAACATACAGTACAAAACTGCCACCCATTTTCATTTAGAAACTCAGTAGAGTGGTATTAGTAAAAACTCAATTAATCTTCAGACAGAAATATCATCTAAAGTTGCGCAAACAAAGGAAAGCAACCTCAGGCTTCTCGTACTCAGGATCAGGAATGATTCCTTGTCGTCCCAGGCTGTGTTTAGATCCAAAGTTTGGATCTAAACTTCAGTCCTTTCCCATCACATCAACCTTCTTGGCTTCAGGATCCTTCTTCTTCTTTGGAGGAAGATTATCACAATCACCATAGATGCTTCCAGTTCGCTTCTCAGTGTTATCAATCAGAATGCTGTATTTGGCGTCAGGACGGATGATCAAGGTGTAGACGTGTGTCAGTTGATCGGTCTCGCATGGCACGTCCTTCTTGATCAGATGGTTATTGCCGTTCTTAGGCTCGTTTTGCGTACCTTCCCAATCTTCTCTATCTCCTTCTCCTCAAACACACCCTTAGTAAGGATAGCGTGAACCTTCTTGGTGGCATACCCGCAGATATCTGGTCCAAACATGATGCTGTACGGTGTCTCGCCACCAAACTTCTTCTGGTCAACATCGCCGCCAAGCAATTTCACGTAGCCGCCGCCGCAGTCGAGCTTCTGCTCGTGCTTCACCGAGAACTGCAGCACGAGGGTCTTGTCCTTGTTGCTGAACTCAGGGTACTCGGCCGAAATGGCGTAGAATCTGTAGTCCTCTGATGTCTGGATACCCTTGTTGTTGGTGTCGCCGTTCCACTTGCCGGCCGTGTGGTTCCACTCGCCGACTGTGTTGTCCTCCTTCTTCCACTCAGATTTGACCCACCGATCCTCCCATCCATCTGTTTTCACACACAATTCAGAATTCAGAAACCAACCAATTCTAGTTTCTCTGAAAACCATATATGTGTACATCACATTTCAGACAAAGCTGAAAAGGAATGCCGGTACCAACAACAGGATCGAAGTTCTCAAAAAAAAAAAAAAAAGAGGATCGGATTCGATTAACAAAGAACGCACATACACACAAATTTGCAATTGCTTGCTTCCACAAAAAGAAAGAGATCTCCAAACAAGTACCAGAGTTCTCGTACCTTTAGCTAAACACTTTATCTCAACTATAGCTATACCAGTTCCAGACAGGAAATGTACAGGGGCAAAATGGTCAATTCTCAAAGTGAGCAAGTCACTATAATCCTCCTCATCGGCATAACATTGTTGGAAGCAATCGAGCAAAGTGAGTGGTACTATTAAATTCTTTTCGTCCTCTGTCTTCTCTGATCTTAGCATCTCTTCGTTCTCCTCTGTTCATCCCCTCCTTCCACATGATTAGCTGATAACCACGCTTTCCACGTGGTTTCCTTTGGTCAGAGGGGCAAACAAATCCAACAAATTGTGTCATCGAACGGGAGGCAAATGAAGCGTAATGTAATATGATGGTTCCGTATTAGATTGGACCTAATGAATGTGGACAATAGATTTTCTAGCCTCACTATCCCTAATGTTTATGGTGCTATTAAAATCTACTAAGATAATTCTTATTTGCTCCAGCAGTGTATAAATAGGAACCACTTGAAGAATTTCATTTTTTCCATTCAAGTCTATAACTCTCAAAGTTACATTGCCATGTTCATGCTTCTGAACTGTTTCTTGAATGATGGAATGGAGTAACCACCAGTACTGTCTCCCAAGCCGTTCAAAATAAACCTAAACTGAAGCTGGAATAGCATCAGAACAGTCTCCTTTTCTGATACCACATAGTACTGGATATTTTTGTCTGGGGGTTGAATTGATGGATAGGCTATCCTCCAAGTGTTTGAATTCTGTTCAAGAGGTTAGCAGCGTGTAATCCTGCAAAAGGACACTTGGCAAGATATTTTACCCAGTAGACATAAACTAGTTGTATTCATCATTCACCAATAATCTTCACAAGAGCATTTTCCATCCTCAAACTTATGCAAACACTTTGGATCCTTGATCAGTATATGGCGTCCATATTTCTCTGAAACTAGTTTGGCAAAGGTGTGGCAATGGTTACACATCCTTGCAGTTTTGATTATCCTTATGTTTTTGAACTGTGGGGAATTAGAAAGCCCAAATGCAATAGCTAGCTTCTCACAATGGACTCCAACAACTTCTTCCTTTTCTTCTTCAACATCTAGAGTTCCAATGCCAATGTCAAGCATAGAATGTCCCATCTTAAACATCATCGACTTTAATTCTGCTACTGTATCCTCCAAGCCAACATTATCACCATTTGAGAACACATACACCTTATTCCTGATTTCTATTGAACAGCTCTCGACCTCATCTAAATTTCTTCCTTTGTTGGGTGTCATCTCCTCTGGCACATCAACAGTTTTTCCAGTTAGATCTTGCAGACTAGAACCTAACCTTTGGACTCTGGGATCTCCAGGATCAATCGCAGACAGTTCTCTAGCTGCCAGGTGAGCCAGTCTTACATTTCCATGCATTACAGCTGCAGTAAGAAATGTGTCCCAGACTGTTGAATTGGGTATCAAAGGCATCTCGTCAATAAGCTCATATGCTTCTTTTAGTCTCCCTGACCGACCAAGAAGATCCACCATTGCTGCATAATGGTCTAATTCTGGAGTTATATTGTAATCATTGGCCATGTTGAAAAATGTCTGAGACCCTTCAGATACCTTTCCCGTGAGACCATAGGCCTTGATAACAGTGACCAAAGTTGTATGATCTGGCACAACACCTTCTTGCTTCATTTGACAGAAAAGATCCAAGGCTTCATTTGGAGAACCATGCAGCACATGAGCGAGAATGATACAGTTCCAAGAAATAATGTTCCTTGATGAATGCATATCAAACACAGCACACGCACTAGCAAGATTACCAGATTTTGAATATGCATTGATAAGTGCATTTGCAATTTTGCCATCCAGTTCTAAATTGTGGTGAAAAATACAGGCATGGATCTCCCGTACTTTCCAGGACGCAACTAGATTTGTGAATGCTGGAATAATGCTAAGGATGGTAATGTAGTCAGGCCTCCTCAGAAGTGCCTGCATCTGCCGGAATATTCTTATGGCTCTATCATAATAACCATTATGCACTGATCCAGCAATGAGTATGTTCCAGGTTGCTGTATCCCTTTTTACTCCATGACTTTCCATCATCTGGAATAGCTCAAAAGCTCTCTCATCATCCCCATTCCGTATGTACCCTGAGATCATTGTATTCCAGGTTATCACATTGCGCCGAACACCATAGTTTTCCATCTTACAGAAGAGCTCGTATGCTTTGCCACAATAACCTGCTTGTGCATACCCTGAAATCATTGAATTCCAGGAGAATATATCCTTGTCAGGTATCCCACTAAATATTCTCCAAGCTGCAACTATTTCTCCACATTTTGCATACATGTCAACCAAGGAGTTCCCTGAGAGCACGTTGTTAACACTGCCAACCTTAATAGCATGGCTATGGAGCTCCTTTGCCTGGTTTAGTAACTTCAAACTGGCACAAGCTGAGATAGCACATGCAATTGACATGCCGTTAGGTTCAACTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0240300.1 | 3 | 33744338 | T | C |
| Osa03LNT0240300.1 | 3 | 33747325 | C | G |
| Osa03LNT0240300.1 | 3 | 33744626 | T | C |
| Osa03LNT0240300.1 | 3 | 33744783 | A | G |
| Osa03LNT0240300.1 | 3 | 33744937 | G | A |
| Osa03LNT0240300.1 | 3 | 33745662 | C | T |
| Osa03LNT0240300.1 | 3 | 33746751 | T | C |
| Osa03LNT0240300.1 | 3 | 33746803 | T | A |
| Osa03LNT0240300.1 | 3 | 33746819 | T | C |
| Osa03LNT0240300.1 | 3 | 33747542 | A | G |
| Osa03LNT0240300.1 | 3 | 33748088 | T | C |
| Osa03LNT0240300.1 | 3 | 33749419 | C | G |
| Osa03LNT0240300.1 | 3 | 33745968 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0240300.1 | osa-miR5538 | Cleavage | 5.0 | 20.793 | 1 | 22 |
| Osa03LNT0240300.1 | osa-miR5542 | Cleavage | 4.5 | 14.094 | 1 | 21 |
| Osa03LNT0240300.1 | osa-miR396a-5p | Cleavage | 5.0 | 22.02 | 1 | 21 |
| Osa03LNT0240300.1 | osa-miR396b-5p | Cleavage | 5.0 | 22.02 | 1 | 21 |
| Osa03LNT0240300.1 | osa-miR396c-5p | Cleavage | 5.0 | 22.02 | 1 | 21 |
| Osa03LNT0240300.1 | osa-miR398a | Cleavage | 4.0 | 19.121 | 1 | 21 |
| Osa03LNT0240300.1 | osa-miR398b | Cleavage | 4.5 | 19.121 | 1 | 21 |
| Osa03LNT0240300.1 | osa-miR171b | Cleavage | 4.5 | 19.245 | 1 | 21 |
| Osa03LNT0240300.1 | osa-miR171c-3p | Cleavage | 4.5 | 19.245 | 1 | 21 |
| Osa03LNT0240300.1 | osa-miR171d-3p | Cleavage | 4.5 | 19.245 | 1 | 21 |
| Osa03LNT0240300.1 | osa-miR171e-3p | Cleavage | 4.5 | 19.245 | 1 | 21 |
| Osa03LNT0240300.1 | osa-miR171f-3p | Cleavage | 4.5 | 19.245 | 1 | 21 |
| Osa03LNT0240300.1 | osa-miR815a | Translation | 2.0 | 6.021 | 1 | 21 |
| Osa03LNT0240300.1 | osa-miR815b | Translation | 2.0 | 6.021 | 1 | 21 |
| Osa03LNT0240300.1 | osa-miR815c | Translation | 2.0 | 6.021 | 1 | 21 |
| Osa03LNT0240300.1 | osa-miR1432-5p | Cleavage | 4.5 | 15.061 | 1 | 21 |
| Osa03LNT0240300.1 | osa-miR1442 | Translation | 4.5 | 18.617 | 1 | 20 |
| Osa03LNT0240300.1 | osa-miR1858a | Cleavage | 4.5 | 10.407 | 1 | 21 |
| Osa03LNT0240300.1 | osa-miR1858b | Cleavage | 4.5 | 10.407 | 1 | 21 |
| Osa03LNT0240300.1 | osa-miR1865-3p | Translation | 5.0 | 22.387 | 1 | 24 |
| Osa03LNT0240300.1 | osa-miR2876-3p | Translation | 3.0 | 14.846 | 1 | 21 |
| Osa03LNT0240300.1 | osa-miR2880 | Translation | 5.0 | 23.581 | 1 | 24 |
| Osa03LNT0240300.1 | osa-miR1862f | Translation | 3.5 | 12.268 | 1 | 20 |
| Osa03LNT0240300.1 | osa-miR1862g | Translation | 3.5 | 12.268 | 1 | 20 |
| Osa03LNT0240300.1 | osa-miR5486 | Cleavage | 4.0 | 17.168 | 1 | 21 |
| Osa03LNT0240300.1 | osa-miR2873a | Translation | 4.0 | 23.945 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0240300.1 | 3 | QFll3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0240300.1 | 3 | QSn3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0240300.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | R1618 | G164 |
| Osa03LNT0240300.1 | 3 | Qbp1 | Resistance or Tolerance | Insect resistance | R1925 | R2443 |
| Osa03LNT0240300.1 | 3 | qPES-3 | Morphological trait | Panicle/flower | G249 | G164 |
| Osa03LNT0240300.1 | 3 | nan | Morphological trait | Panicle/flower | G249 | RG418 |
| Osa03LNT0240300.1 | 3 | qSBR-3 | Resistance or Tolerance | Sheath blight resistance | G249 | G164 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)