© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0240400.1
AATGTCAGCAATGTCTAGAACGGATGATTATCTTTGTAAAGTTCAGGTTTACAAGAAAATTCCCTAGCCAAGTAAGCAGAAAGATTAAAAGCTTTCCGTTTATCTACAAAAAAGTTAGAAGAAAATGACAGACAATGTTTTGCTTCCCTCTTGACTCTTGATATAATAATTATACAACAATTCATCGTGTGTTTCTGTGGTTTTCTTATCTGCCTGAAGAAAGTGGAAACTGTATTACTCAACTGCAACATTTCAACTCTGAACATAAATTTTCAGTTGGTGCCGAAAATCAGATACTTGTAGTAACTGTTGGTCACTAAACCCCTATCACCCCTTACGAGCAAGCATTTGATAATCATATTAGCTCCTGCTCCTTGACACTAGGCAATCTTCTAACATTTTCTCGATCGCGCTTGAACACAAAGTACAGTGGGCTGTAGAACAAGAAGCACAGGCCAAAAGGAACAATCATCATTGTCAATAGCCCCCTCGAGAGTGCATACGCCCCTGCTACCGATCCATTTTCCAGATTGACGGTCTTTGCGTTGTAGCCATAGATCTTCTCAGTGACCATGCCAACAGCAGGAGCAGCCAGGGAGGCAAATGAACCCTCGAACGCGCGGTCGAAGGCATAGATCATCGTGCGGTGCTTGGGAGGGACTACCTCCGCAAACATGGGGTTGTTTGCGCAAGTAGCGCACCAGCTGATGGTAATCCCCATCAAGAAGAGAGTGACAGCAAAAGCAGACCAGTAGTCGACTGACTGAGGAATGACTGTAAGGAGGATCCAAGAGAAAGGGATACCCATGAAGGCGCTAAACTGAGCACACATGATGCGAGCTGAATCAGGATAGTATTTTGACAGACGGTCTGCAATTACTCCGCCTAGAAATGATCCACTGGCACAACCGATAGCAAACATGCTGTTTAGCGCTGCTGAACTGCTATTGTCAAAACCAATGAGCTCAAACCACATTGTGAAGAAAACTACAGCAGTCCATGGCAATGAGCCAACTATGCCCTGCAAGACAATGATTTGAAATGTTCGCACTTTCATGACAGATCTTGCTGCTATCCAGGAATCCTTCCAGATGGACTGTGGAGGAAAAATACCATTACCGATCAAATGCGACCTCTCATGGTGGTCCTCGTCATCACCAAAATGGCTTGGAGACACTTTTCTAGGATCAACCGTGTAAAAGTAGACAAGAAGCCCAATTAACAAGCTAAGAAATGCAACCATTAGAAATGCAAACCTCCATCCTGGCAATCCCCAGTAATCCCTACCAGCCATGATTGTTGCTAAAATACTTCCACCTATACCACCTATTGAACCAATGAGGCTTAACAAGCCAAACCCTGCTCCGCGTGTACCATCTTTGTAGCTATCAGCAATGAAGGATTGAAGTGCCGGTATTACAATGGCTAGTCCAAGACCATTCACAGCTCTCCAGAATGCAACCTGCTGAAAATACTGGCTGACACCAACAGCCCCTGTTGATACAGCCCAGAAGACTGTCCCTATAGCAAGAACTGCAGGGCGATCATATTGAAGTGCAAGGACACTTCCTTGTAAACTGCCGGAAGGAGATTCTCATCAGCCCGCTCCATTATGGAAGCTAGGTTGATGAGGATAAGAGAAACGGAAAAACCAAAAAACATCTTCTTTGCCCTCATATTGGGACAGTGGGGGATGAGCTCCTCCTCGCAGAGCCGAGCCCGCGCGAGATCCGCAAGAACCGCACGCTTGCAGCTGCGGTTACCTTGCTCGGATCGAGCGAGCGAGCGAGAGAGAGAAGAGCTGCGACTATGCGAGGCAAGGACGAGGAAACTGAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0240400.1 | 3 | 33838432 | A | C |
| Osa03LNT0240400.1 | 3 | 33839174 | T | C |
| Osa03LNT0240400.1 | 3 | 33839490 | T | C |
| Osa03LNT0240400.1 | 3 | 33840336 | A | G |
| Osa03LNT0240400.1 | 3 | 33841368 | G | A |
| Osa03LNT0240400.1 | 3 | 33841468 | A | G |
| Osa03LNT0240400.1 | 3 | 33841005 | G | T |
| Osa03LNT0240400.1 | 3 | 33840589 | A | G |
| Osa03LNT0240400.1 | 3 | 33839275 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0240400.1 | osa-miR418 | Translation | 3.5 | 13.813 | 1 | 21 |
| Osa03LNT0240400.1 | osa-miR396f-5p | Translation | 4.0 | 19.742 | 1 | 22 |
| Osa03LNT0240400.1 | osa-miR396g | Translation | 4.5 | 20.507 | 1 | 21 |
| Osa03LNT0240400.1 | osa-miR396h | Translation | 4.5 | 20.507 | 1 | 21 |
| Osa03LNT0240400.1 | osa-miR396d | Translation | 4.5 | 20.507 | 1 | 21 |
| Osa03LNT0240400.1 | osa-miR5083 | Translation | 4.5 | 16.422 | 1 | 20 |
| Osa03LNT0240400.1 | osa-miR5156 | Translation | 5.0 | 19.744 | 1 | 24 |
| Osa03LNT0240400.1 | osa-miR5516b | Cleavage | 4.0 | 10.012 | 1 | 21 |
| Osa03LNT0240400.1 | osa-miR5516a | Cleavage | 4.0 | 10.012 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0240400.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | R1618 | G164 |
| Osa03LNT0240400.1 | 3 | qPES-3 | Morphological trait | Panicle/flower | G249 | G164 |
| Osa03LNT0240400.1 | 3 | nan | Morphological trait | Panicle/flower | G249 | RG418 |
| Osa03LNT0240400.1 | 3 | qSBR-3 | Resistance or Tolerance | Sheath blight resistance | G249 | G164 |
| Osa03LNT0240400.1 | 3 | Qbp1 | Resistance or Tolerance | Insect resistance | R1925 | R2443 |
| Osa03LNT0240400.1 | 3 | QFll3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0240400.1 | 3 | QSn3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)