© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0240500.1
TATACCAACACAAACAATTATTTGTGTGAACTGATGCACTTTAAACAGAATGTAAACGTTATCTCCGAAGTCAAGACCATATGGAAAATCAGATATACAAATTTTACAGAGCACAAACAAGAACAGTTACTCTAAGAAGAAAGGCACTCAAGGAAAAAAAACGCAGTGATGGATTTCACTTTCTGGTAATAGCAGGTGAGAAAGGAAGCGAGGATGAGGGATCATATCAGTTTCTTGCTCCCACCCTGGAAAACCTCCTTGATAATTTGAATGCCGAGAACTGGTGCGCAGCCTGGCTTTCTGTGATAACAGCGCAGCTTTCCTGACGAGTATACTCTTGTTTGTCTGAAGTAGAGGATGATCTGCGCAGGACCTCAATCAGAGAAACACCTGAACTGTTATCTCCCTTGGAATTTGTTTTTGTTGCCGCTTGTTTTGACTGTGAACTACTGAACTTTGCTTTCTTTGGTTGGCTGGAATTCGTCTGATACGTATCTGCATTACTCTCGGAAGTAGACAAGCAACTCTTGTTGCTACTATTGCTGTCGTCACGACCAAATACATAGGTTCTATAGGCCGATCTGTGGGAAGATGCCAATGAACCACTGGCTGTTCGACCGAGAAAAGATGACTTTGAAGAAGCGCTGTTGTCTCTCCCAACCGTAAGCAATTCATGATTTGATGTGACTTGCTTTCCCCTCCTCTTGGGTTGAGGAGCAATATTGAGCTTCTTTATCAGACTAAATACTTCCCTTGAGCTGTCATTCTCCAGTGGAGATATGAATGAACTATTATGAACTTCTCGCTTTGAGATACGTTGGCGAGCCAAATGTTCTTCTATTTCCTCATCATCAGAGTGCTCATAAGTATCATTATCATCTGTGAACATTCTCGCAATCATTTGTTTTGCTTTTTCAGAATTCTGGCGCACGACATTAGTTGGAGTCAAATCATATGACATTTCATTTTCTGATTCATCTTCACAGTCTTCAGCATCATCCTCATCTTGATCCATTACTTTTTTTTGCTCCTGGTGACCAAATTTCAGCTTTTGCATAAATTTATTTGTTTCAGCAGCATCTTGCTGCTGAAGCCACTTTTGGTGGAGCGCATTGCGTTTCTCATGATCTATTTCTCCTTCTTCATACCCAGCTTCTATAAGATCATTGAATACTTCATTTTCATCACTTCCATCATCTTCTTCATTGTCCTTAAACCTCATCATGTCATCGTCACTGTCATCCTCTTCCTCAGCTTCAACATCCAGAAAATCTTTCAAGATAGCATCATCTGGGCATGAATCCCCTGCTAAAGCTCTTTGGAGTGGTTCATGAACATTCACATCATCTTTCGGAGTGCTAGGAGCAATGTTCTCCTTATCATTGTATTCTTCATCTTCTGATGAAATGTCATCGGTACTCTCAGTAGGGCTTGAAGAGGGGGGTGATTGAATTTCATCTGCAGCATTATTGGGATTGTCACTTGATTGGGCCTTGTCCTCAAGATTATCTTGAGAATTTTCCAAGAGTTCCTTATCTAGATCTTTGCTACCACAATTATCAAGATCCTTATCACAATTCAAAGCATCCTTGTTCTCAGGTACACTGTCACACTGGTTCACGTCACCGCTATTCATTCCACCCTCATTCTCGATATCGTCAATCTTCGGATCTTTGCCTTCTGCATCCACCTCCTTAACCTGAGGTGCACCTAAATCGCCAGCGGTACCACTCACAGGATCTGAAGAGACATCATCTTCTTCTTCGTCATCATCATCATTAGGAGTAGCTGACTTCTTTAGAATCTCTAGTTTCCGAAGGCGGATCTTCTCAAGGACTGATGAGATGGGCTTGTACACTGGCTGCGCACTCGGCTTAAATGATACGCTCCTCGTCTCTCGCAGCAGCCTCTGCGACTCGGCGTGGATCGAATCAAGCTGCACCCTCCTCTCCTTCTCCGAGCGTTTCTTCCCTCGGGCCGAGTCCTTGGGCGCCTCATCCTTCTTCCTCCTCTTGCTCCGCTTCCCCTTGACCTCGGCATCCATGGCGATTTCGCCGCCGCCTTCTTCGCCCTCGTCCATGTCGAGCCGCTTCTTCGCCGACTTCTCCCTGCGCAGCTCCTCGATGAGCCCTCCACCCAGCATCTCCTCCTCGTCGCCCTCCCCTTCCATCCTCGGCATCCCCAGCGGGTCCCACCCCGCGGCGCCGAAGGTCTCCGAGAACAGCGGGTCCAGCCCGTCATCCTCCTCCTCCTCCTCCTCCTCCTCGGTGGTATCTGTCGGTGGCAGCGGCGAGGAGCTCGGGTTGGGAGGAGGAGAGGTCAGTGCAGGGGAGGGAGCAGCTTCCGCAGCCGCATCCGCATCCAGCGGCGGCGGCGGAGGTGGGGAGGGGTTAGTGGGCGGGGAAGGGAACTGAGCTAGGGTTTCCTCGTCCAACGGCGGCGGCGGCGGCGGAGATGGTGGAGGTGGGGATCCGACGACGGGGTGGGCGGCGGTGGCGATCTGGGACGACTTCTTCAGCCGCTTGAGCCGGCGGGGAGGCGATGCGACGGGGGAAGCCGGGAGCGCGAGGAGCTCCGCCTCATCGAAGGGCTCCGTCTCCATGACGTCGTCGCCGCCGCCGCCGCCGCCGCCGCCTAGGGTTCTCTCTCTCTCTCTCTCTCTCTCCCCCTTCCACCAAACTCCGAATCGAGACGCCGCGAGCCGAGGAGCGGAGAGCGGAACACCGGATTCGAGAGCGCGCGATGGGGGAAGAGGAAGGAAGGAGATGAAGAAGATGAGGATGAAATCCAAGAGCAGCAGCGCGGGAGACGTTTCGAGTTTTCCCCTCGGTTTCGCGCTCCTACTGTACTGTACTGCTTTTCCCACCATTTTTTTTCCCGTGCTCGCTGCTCTCCCCGCGCTGCGCTGCGCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0240500.1 | 3 | 33850606 | G | T |
| Osa03LNT0240500.1 | 3 | 33850632 | G | A |
| Osa03LNT0240500.1 | 3 | 33851239 | A | G |
| Osa03LNT0240500.1 | 3 | 33852478 | C | T |
| Osa03LNT0240500.1 | 3 | 33852516 | T | A |
| Osa03LNT0240500.1 | 3 | 33852817 | A | T |
| Osa03LNT0240500.1 | 3 | 33853484 | A | G |
| Osa03LNT0240500.1 | 3 | 33854054 | G | A |
| Osa03LNT0240500.1 | 3 | 33854800 | T | C |
| Osa03LNT0240500.1 | 3 | 33851757 | A | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0240500.1 | osa-miR5792 | Translation | 5.0 | 20.753 | 1 | 24 |
| Osa03LNT0240500.1 | osa-miR5824 | Cleavage | 4.0 | 19.941 | 1 | 24 |
| Osa03LNT0240500.1 | osa-miR6250 | Translation | 4.5 | 23.373 | 1 | 22 |
| Osa03LNT0240500.1 | osa-miR164a | Cleavage | 4.0 | 15.885 | 1 | 21 |
| Osa03LNT0240500.1 | osa-miR164b | Cleavage | 4.0 | 15.885 | 1 | 21 |
| Osa03LNT0240500.1 | osa-miR164c | Cleavage | 4.5 | 15.885 | 1 | 21 |
| Osa03LNT0240500.1 | osa-miR164d | Cleavage | 4.0 | 15.885 | 1 | 21 |
| Osa03LNT0240500.1 | osa-miR164e | Cleavage | 4.0 | 15.885 | 1 | 21 |
| Osa03LNT0240500.1 | osa-miR169f.2 | Translation | 4.5 | 20.229 | 1 | 21 |
| Osa03LNT0240500.1 | osa-miR172a | Cleavage | 3.5 | 17.027 | 1 | 21 |
| Osa03LNT0240500.1 | osa-miR172a | Cleavage | 5.0 | 7.495 | 1 | 21 |
| Osa03LNT0240500.1 | osa-miR172a | Cleavage | 5.0 | 20.59 | 1 | 21 |
| Osa03LNT0240500.1 | osa-miR172b | Cleavage | 4.5 | 17.027 | 1 | 21 |
| Osa03LNT0240500.1 | osa-miR172c | Cleavage | 4.5 | 17.027 | 1 | 21 |
| Osa03LNT0240500.1 | osa-miR172d-3p | Cleavage | 3.5 | 17.027 | 1 | 21 |
| Osa03LNT0240500.1 | osa-miR172d-3p | Cleavage | 5.0 | 7.495 | 1 | 21 |
| Osa03LNT0240500.1 | osa-miR172d-3p | Cleavage | 5.0 | 20.59 | 1 | 21 |
| Osa03LNT0240500.1 | osa-miR164f | Cleavage | 4.0 | 15.885 | 1 | 21 |
| Osa03LNT0240500.1 | osa-miR414 | Cleavage | 2.5 | 16.812 | 1 | 21 |
| Osa03LNT0240500.1 | osa-miR1856 | Cleavage | 5.0 | 12.776 | 1 | 21 |
| Osa03LNT0240500.1 | osa-miR1858a | Translation | 5.0 | 23.592 | 1 | 21 |
| Osa03LNT0240500.1 | osa-miR1858b | Translation | 5.0 | 23.592 | 1 | 21 |
| Osa03LNT0240500.1 | osa-miR1866-3p | Translation | 5.0 | 15.007 | 1 | 22 |
| Osa03LNT0240500.1 | osa-miR2105 | Cleavage | 5.0 | 16.939 | 1 | 20 |
| Osa03LNT0240500.1 | osa-miR3979-3p | Cleavage | 3.5 | 16.753 | 1 | 20 |
| Osa03LNT0240500.1 | osa-miR5148a | Translation | 5.0 | 13.438 | 1 | 24 |
| Osa03LNT0240500.1 | osa-miR5148b | Translation | 5.0 | 13.438 | 1 | 24 |
| Osa03LNT0240500.1 | osa-miR5148c | Translation | 5.0 | 13.438 | 1 | 24 |
| Osa03LNT0240500.1 | osa-miR5340 | Translation | 5.0 | 4.681 | 1 | 23 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0240500.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | R1618 | G164 |
| Osa03LNT0240500.1 | 3 | nan | Morphological trait | Panicle/flower | G249 | RG418 |
| Osa03LNT0240500.1 | 3 | qPES-3 | Morphological trait | Panicle/flower | G249 | G164 |
| Osa03LNT0240500.1 | 3 | QFll3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0240500.1 | 3 | QSn3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0240500.1 | 3 | Qbp1 | Resistance or Tolerance | Insect resistance | R1925 | R2443 |
| Osa03LNT0240500.1 | 3 | qSBR-3 | Resistance or Tolerance | Sheath blight resistance | G249 | G164 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)