© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0240700.1
GGCAGCTTATAGTTTAGTATACTTTATAAAATGGGTGCAACCACAGATCGACTCATCATTTCATCAAGCATGTTCAGCTGAATATAATGCCAGCTCCACTTGACATGACGAAGGTTCAAGTCGAACAGACACACATATTCCCTGTTTAGAATATTAATCAACAGTTTAAGTGACAACTGATGTCACTGACGAAGTGAGGATGAACTTTCATCAGTGTATAGACAGACACTCATTCAAGGTGAATTGATACTTTGGTACAGCTATGTCTTATGGTGCTTCCAATGCTGGAGTAGTTTCATCCATGCAAAGTCTATTTCTACATCAGCAGCACCAAGAATAGTCACCCTCAAGGTACAAACTACATCTCACCACACTCGCTTATGACACATGCGAGCTTCGGTCGGTTGTTTGGTCCAGTTGCAACATTCTCGATCTTCCGCACAGCAAGCATACCATCCCCTAGCACCCTCCCAAAAACCACATGCTTGTTGTCCAGCCATTCACATTTTGCACAAGTTATAAAGAACTGAGATCCATTAGAGTTCACCCCACTATTTGCCTGAAAAAAGATAGGACAGTTTTTTACATCTAGAAAATAAAACCAAATATATCATCTAAAATAAATCAAATTACTGTCTTGCAGTGCAGGAAACATGCACATAAAAGTTCTAAAAAACAAAATGGATGTAGAAGTAGCTAGTTACACCGAAACAGATAAAAATATAGATTAATAACAGCATAAGGCGGTTGGTCACTTGGTCAGGCAAATGTTCTAAAAGTAAACAATACAATTGGGTCAGTCACCAATCACAATGACCTTTGATGATGCTTCAATGTCTTGTTCTAATTTGATGTAAATGTAATATGACCTAACCTATGCAAATTTCAACGTTGGGAAGAGTAGATTGGAAATACTGTGTGTAAAAACAATTTGCCACATTTAGATAGTTAACTTCAGATACCTCATTTTACGCACAATTGTGTATCAACTATCTGCAGGTTTCCAGAGCACAAGAGGCTCTGCTTACCCAATGACCAGAAGCCACACACCGAAGGCATTAACAGATGAAAACTAAGAATTTGTAACAGAGAGAGAGAGAGAGCAAGGAGTCCAAGGAAATTATCTGCAAACATAGCTAAACCACCAAACACTAGAAATAGTTGTCCTGCACAAGATTACATTAGAGAGGTAATATTTTCTAACAGTATTTCAATTGAAAATCAGGTGGAGAGGAATAATACCATAGAAAGTAGGCCAGGACCAGTATGCTTTGCAATGAAGTTTTCATCATCAAATTTGGTACCATAGATTGACGTGCATCCAGTACCATCCCCCTTCATATAGTCACCTCCCTGAATCATGAAATCTTTGATCACTCGATGGAACTGACAACCCTTATATCCCTGTGGTAAACCTGATTTCCTGTGCTCTCCAGTGCAGAACTGCCGGAAGTTCTCCGCCGTCTTGGGGACGATGTCGGCGAAGAGCTCCATCTTGATGCGGCCGGCGGGGATGGACCCGATGGTCACGTCGAAGAACACCACCGGGTTCTTCGGGTTCGGCGGCCGCAGGTGCCAGTCCACCGACGACGACGCCGCCGCCGCCGACGGCGGCGTGGGCCCCGCCGAGATCGCCGCTCCCCCCGAGGACGCCATGCCCGTGCTCGAACTCTCCAAGCTTCGCACGCGGCGGAGGCGGCGGCGACGGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0240700.1 | 3 | 33995830 | A | G |
| Osa03LNT0240700.1 | 3 | 33995882 | A | C |
| Osa03LNT0240700.1 | 3 | 33996315 | G | A |
| Osa03LNT0240700.1 | 3 | 33998076 | T | C |
| Osa03LNT0240700.1 | 3 | 33998237 | G | A |
| Osa03LNT0240700.1 | 3 | 33998275 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0240700.1 | osa-miR5531 | Cleavage | 5.0 | 12.709 | 1 | 22 |
| Osa03LNT0240700.1 | osa-miR5788 | Translation | 4.5 | 18.938 | 1 | 21 |
| Osa03LNT0240700.1 | osa-miR6247 | Cleavage | 5.0 | 12.978 | 1 | 21 |
| Osa03LNT0240700.1 | osa-miR156b-3p | Cleavage | 4.5 | 9.064 | 1 | 21 |
| Osa03LNT0240700.1 | osa-miR167h-3p | Translation | 4.5 | 11.4 | 1 | 21 |
| Osa03LNT0240700.1 | osa-miR416 | Translation | 4.5 | 19.666 | 1 | 21 |
| Osa03LNT0240700.1 | osa-miR5500 | Translation | 5.0 | 15.258 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0240700.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | R1618 | G164 |
| Osa03LNT0240700.1 | 3 | QSn3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0240700.1 | 3 | Qbp1 | Resistance or Tolerance | Insect resistance | R1925 | R2443 |
| Osa03LNT0240700.1 | 3 | nan | Morphological trait | Panicle/flower | G249 | RG418 |
| Osa03LNT0240700.1 | 3 | qSBR-3 | Resistance or Tolerance | Sheath blight resistance | G249 | G164 |
| Osa03LNT0240700.1 | 3 | qPES-3 | Morphological trait | Panicle/flower | G249 | G164 |
| Osa03LNT0240700.1 | 3 | QFll3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)