© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0241100.1
CTCAACCAAAACTCAGAAGTACACACTTCATTTATTCTCCAATGAACAATACAAATGTTGGCAGGGTACTATTTCCCCGATTTACAGACTTAAATGCCTTCAACTGAGAAAATCCAACAAATAGAGAGCCACTATACTCCTTATACATTCCGCCAAAGACTTACAACCTATGGGATGCCCTTTCTCGTTCTAAAAGAATTTAATCTACGGACCTGATCTAAACTAACAAAATTTACAACTTGCTCTATACCTCAAGCACGGCGACTCAACTAAAAAACTCGTCAACCACTGCTTCAACAAACCAAAAAAAAAAAAAACTTTTGACCTTATGAACCAACGAAGAAACATTACAAGCTGAGAAGTACCTAAGAAAAATCAAAAACTAAATAAGGGGGAAGCAAGTGTATTGTGCCATGGAAACCTGAAACTCTGAAAGCAGCCAACAGCCTAACTGAACAGATCCAAAAGCATCTCTTCCAAAAGATCATCTTTTATCATGTTCTCCACATCCCTCCCTACCCTGTCAATGCAATCCGATAAATCTGGCCACTTCCGATCTAACGCTTTCTTCTCAGGCTTAGTCTTACTTAGCCCAAGTTCTTCCCGTCTCTGAACCAACATCTGCAAAATCTTCTCCAGGAGACCCTCTGAACCCCATACTGGTGCCATTTTTCTAGCAGATTTCACCCACGGGTGCATGTCCAAACATGGTGCAAGAATTTCTGATAATATGGTGTTAACCATATCAAAGATAAGCTTCCTGTCTGATCTTGACCATTCAGCAACTTTCATGTACTTCTTTTCAAGCTTCTCAAACACATCATAGCCTGCGGGACAATCAAGAGATTGGCATACCTTGTACAGCTGATCCTCCGCGGTGCCATGAATGCCAGAAACAATCAGTATATCCAGCACGTAAGAAAATTCTCTTTCCTCTTCATCTCCAAATTCTTCAAAGATATCTTCAACAAGCTGTATTGCTTCACCGTTCAGACTAGCATCTAGTCCATCCACCCCCAAAGCATAATCACTGATTCCAATTTCTCCTACCTCAGCTGTACTCTCAACAGATGGACATCTAACAAGTTCACTTTCTGGATGGAGATCTAGCTTGATGCTTTTAGTGACAGAGAAATCCTCATCTGGAATTTCAAGAACAGATACTGGACTTGGCTGCTCTAGCTCCTTGTGGTTAGTGACATACATAGAGTCTAAATTTGCAGCAAGGGCACAGTGTACCTTCTTAAAAGTCATCTTCCATCGATCATTTACTGATAGGCACGAAGATGACATAGAGTGGTCACTTGAGTCACTGGTGTCAGTTGAAACCGATGCATGCAAATCAGCAATGCTGCCACTGGAGGAAAAGCACACAGCCTTCTCAGACTCACTGTCTGTAGAGCTCCATGATTGTTCAGTTGATTCTTCATTGCGTGGCTCTGAACAGTACAATTTATTCTGTCGGATTAATGAGTTATCCAATAAAGTCTGCCAATGTCTTCCCTCTGATGGGGTGGCCTTCTTATGAACCTCATTTTTCAAAAGCTTGTTGATTGCTCCTCCAAAATGTGCAATATTATGACGCCTCTTTAAAGCACCAACAGTGAAGTTTCCATTCTGATGACTGCTACTATTAGGTGGTTTTAGTAAGTGTGACATTTTCTCTGATAGGGAATATTTTGCATTCTTTGGACTTTCAGCACTTCTAACCAATTGATAACTGAAATTACTCATCCGTGCGGAGTTCTTTAATGGTGGAGGTGGCTTCGGATTAGTACTGTGTTTGCTGAGGTTGAACATAGGATGACAGGGTGATCCATAACTTGAGGTAGTACTACTTCCATGAAGCGATTTCCAATTGTAAGAGAATTTGCTCCGTCTTGAACTCGAAAAGGAAGTTTCTGCCTTTGCTGTATCAAGATGCATTAATTCTGCCAACACAGAAGGCTGTGAATGACAACTTCCCATTCCATTTTTCAGTTGTTCACCGGCAGAACATCTTGTAGAAGTGCCACTAGAATTTCTGTAATTGAATACCCTAGAGTCTGAACAAATATAATCATTTTCGGTTGTGGATCCAGTGTTGCTTCTGAAATTTGATACTCCACGGATACATCGTTGTTTGCCCACAAGCGAAAGTCCTGTTCCTTCCGCACGCCGCGGGACTGCGGCCGCGGCCGTGGCCCCTTGCTCCTTCGCCAGCGCCGCGCGGCAGCGGCCGCGTGGGA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0241100.1 | 3 | 34397496 | C | T |
| Osa03LNT0241100.1 | 3 | 34398648 | A | C |
| Osa03LNT0241100.1 | 3 | 34398957 | C | A |
| Osa03LNT0241100.1 | 3 | 34398986 | A | G |
| Osa03LNT0241100.1 | 3 | 34399071 | A | G |
| Osa03LNT0241100.1 | 3 | 34399165 | A | G |
| Osa03LNT0241100.1 | 3 | 34399238 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0241100.1 | osa-miR5827 | Cleavage | 4.5 | 19.589 | 1 | 21 |
| Osa03LNT0241100.1 | osa-miR5836 | Translation | 5.0 | 18.794 | 1 | 21 |
| Osa03LNT0241100.1 | osa-miR5516b | Cleavage | 4.5 | 14.088 | 1 | 21 |
| Osa03LNT0241100.1 | osa-miR444d.3 | Translation | 4.5 | 13.418 | 1 | 21 |
| Osa03LNT0241100.1 | osa-miR1862e | Translation | 5.0 | 10.915 | 1 | 24 |
| Osa03LNT0241100.1 | osa-miR1862e | Translation | 5.0 | 5.994 | 1 | 24 |
| Osa03LNT0241100.1 | osa-miR2099-5p | Cleavage | 4.5 | 13.311 | 1 | 22 |
| Osa03LNT0241100.1 | osa-miR2872 | Cleavage | 5.0 | 18.515 | 1 | 21 |
| Osa03LNT0241100.1 | osa-miR5490 | Cleavage | 5.0 | 18.207 | 1 | 21 |
| Osa03LNT0241100.1 | osa-miR5516a | Cleavage | 4.5 | 14.088 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0241100.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | R1618 | G164 |
| Osa03LNT0241100.1 | 3 | Qbp1 | Resistance or Tolerance | Insect resistance | R1925 | R2443 |
| Osa03LNT0241100.1 | 3 | nan | Morphological trait | Panicle/flower | G249 | RG418 |
| Osa03LNT0241100.1 | 3 | qSBR-3 | Resistance or Tolerance | Sheath blight resistance | G249 | G164 |
| Osa03LNT0241100.1 | 3 | yld3.2 | Morphological trait | Seed | RM130 | RG1356 |
| Osa03LNT0241100.1 | 3 | spp3.1 | Morphological trait | Panicle/flower | RM130 | RG1356 |
| Osa03LNT0241100.1 | 3 | qPES-3 | Morphological trait | Panicle/flower | G249 | G164 |
| Osa03LNT0241100.1 | 3 | QFll3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0241100.1 | 3 | QSn3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)