© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0241200.1
CACTCGTCAACTTTTCTTCCAGGAAGATAATATGAGAATACAGAACAATGAGGACAACTCGACGCAACAGTCAGTGGGGAGGAGCAAGCTTGGAGGAGTCAAATAGCTCAAACAGTCATGCACAATACTTGATATGGCCTGGTCTACCAAAGCAGTTTTTCTGGATGTCTCTCTTGGGAAGATACATCATTTTGTTCCCCCACGAAAGGCTACAACACCCTGATTAACACAAGCAAAAGTTTCACCCAAATACATCCTACAGAATCATTCCTCAACTCCCAGAGAGCAAAAGGTATAAAAGAACCGTTTCGGTATAGTCAAGCAAGCTATCTAAGCAGAATCAATGGAACAATGCGAAATTCCGAGCATCAGAACCAGCAGTGCGTATGGATGGCTGTCATCAGAACCTGCGGAGCCCACGATCAAACATCCTTGCAGATGGGCACTCATATGACATATGACCCCTCCCACCGCAGGTGCCACAGATCATGGTTGTCATGCAGTTGCGGCTGATGTGCCCTGGCTTGCCACACAAGCGGCAGGTAATGTCACGGAAAGGGCCGCCCTGTATCTCTGAAGAAATGGTCGTTTTTTGACAGTTCCGAGCAAGATGCCCAGAGACATTGCACAGGTTGCAAACAGGCTCGTTCGTGCACTCCCGAGCTATGTGCCCAGGCTGACGACAGTTGTTGCAAGCCCGCTCGTTGGTGCAGTCAACAGCAATGTGGCCTGGCTTAAAACATTTGTTGCATAGCTTACTAGATCCTGAACTTGGGCAATCACGTGCCAGATGACCTGTCTTGCTGCAGGTGTGACACAGGGCGTCATTCTTGCATTCGGTAGCAATGTGGCCAGACTGCTTGCAGTTCCAACAAACAGTTTCAGAAGTGCATTCTGCTGCGAAGTGTCCTGGAAGATTGCATCTGTTGCATGTAGCAGTAGATTGGCAATCCCTAGCAAAGTGACCAGGCCTCCTGCAATTCTTGCATATAAGATCCCTGTGGCCGCGATGTTCTCTTCTACGAATTGGGCTACGGCTACGGCTGCGGCTGCGGCTGCGACGTGATACACGCTCACTACGCAGCCTTTCTCGCCGAGGGCTTCGGCTTCGGCTCCTGCTCCTGCTGCGACTCCTGCTCTTGCTCTTGCTCTTGCTCTTGCTCCCGCTTCTGCTTCTGCTTCTGCTCCTGCTGTTGCTCCTGCTCCTTGATGGACTCATTGTAACAGCGGCAGACCTAAAGTGAGGCTTGGGGATTCAGCTGCTCCATTTCATACTGGTCGACGCAGCGAGGGTGCTGGGCGACATCGCCGGCGCGCCGTAGACCTTCCGGGCTGCTCCGCCGGCGGCCGGCCACCAGCAAATCAGGATCGAGGAACAGCGGCGGCCGGGGAAGAGGACAAGAGGCGGCGGCGGGGGCGGATGCGGATCTCGAAGAGGACGCGGTGTGGGGGCCCGGGGGTTGGAGGTCGACGCGGTGGGCGCTCGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGAGGCCGACGCGGTGGCGCCGGGGAGGAGGACGCCCGGCGGCGAGGCGGCGGCGCTATCGAGCCGCGGTCATGCGGCGGGTGACCGCGTGAGATTGCGAGGTGACTGGCGTCTGCTGCTGCTGCTGCTGGGGTGGGGAATGGCGTTAGGGTAGGGTTCGAGGAAATT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0241200.1 | 3 | 34435301 | T | C |
| Osa03LNT0241200.1 | 3 | 34435388 | T | C |
| Osa03LNT0241200.1 | 3 | 34435657 | A | G |
| Osa03LNT0241200.1 | 3 | 34437170 | G | A |
| Osa03LNT0241200.1 | 3 | 34437539 | A | G |
| Osa03LNT0241200.1 | 3 | 34437774 | C | T |
| Osa03LNT0241200.1 | 3 | 34437935 | G | A |
| Osa03LNT0241200.1 | 3 | 34438006 | T | A |
| Osa03LNT0241200.1 | 3 | 34437600 | A | G |
| Osa03LNT0241200.1 | 3 | 34436232 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0241200.1 | osa-miR5337b | Cleavage | 5.0 | 17.002 | 1 | 21 |
| Osa03LNT0241200.1 | osa-miR397b | Cleavage | 5.0 | 24.59 | 1 | 21 |
| Osa03LNT0241200.1 | osa-miR397b | Translation | 5.0 | 15.863 | 1 | 21 |
| Osa03LNT0241200.1 | osa-miR530-3p | Cleavage | 3.0 | 18.281 | 1 | 21 |
| Osa03LNT0241200.1 | osa-miR1861c | Translation | 4.5 | 19.59 | 1 | 22 |
| Osa03LNT0241200.1 | osa-miR2103 | Cleavage | 3.5 | 14.944 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0241200.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | R1618 | G164 |
| Osa03LNT0241200.1 | 3 | Qbp1 | Resistance or Tolerance | Insect resistance | R1925 | R2443 |
| Osa03LNT0241200.1 | 3 | nan | Morphological trait | Panicle/flower | G249 | RG418 |
| Osa03LNT0241200.1 | 3 | QFll3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0241200.1 | 3 | qSBR-3 | Resistance or Tolerance | Sheath blight resistance | G249 | G164 |
| Osa03LNT0241200.1 | 3 | yld3.2 | Morphological trait | Seed | RM130 | RG1356 |
| Osa03LNT0241200.1 | 3 | qPES-3 | Morphological trait | Panicle/flower | G249 | G164 |
| Osa03LNT0241200.1 | 3 | QSn3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0241200.1 | 3 | spp3.1 | Morphological trait | Panicle/flower | RM130 | RG1356 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)