© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0001300.1
GCCATGGAATGCCTAATTGCCATTCTGGCTCTACTGTTATAGACGAAAATGATTGCGATTGTAAAATGAAAAATGCAAGTGGATGGATCCAGAAAACGACGTGTATTTCCTTCCATTTGCAAGTAATCTGAATAATAACAACCTTTTCAATACTTATAGTGGGTAGCTGAACTTGCTTGCAGTACTAGAGAAGCTCAAGTTACAGCATCTTGGGTTAGTTAGCGATCTGTTCCTTTCTCATATGTACAGAGCCACTACATTCTTGCAAGGGCACCTTGAAGCGAGTGGCTTCAAACTATCTTCATTTACTATGTCACATATGGTCACCTTCCTCTTCTTTTTTTCTTCTTTTTTTGAATTTTTTTGGCATCGTTCTTGATCGTGTCAGTAGATTGGTACCAGGCGTGTCTGAGAATGAATTGGCTGTGCAGGATCGGTATCTGAATAATCCTCCTCCTCTTCGCTGTCTGACGAAGTCATATACATTTCCCGTCTTTCCTGCTGGCGACGACGACGATGGAAGGTTGCCAATGCTCTCACCATGACCAAGATTGGAAATAGGATTCCGGCGGTCCTCAAGACAAGAAGCGAGAATAAGGCCAACGAGTACTCCCCATCCCCACCAATCATAAGAGGAAGAGTGTGGCGAAGAACCAGGAGTGACATGAAAATTATGGCGACTGTTCGGCAACACAGGGTGCTGCTTCTCGTCCTAATGGGTAAGTAGTCCTCATAACCATCCATGAAGTCGCGCTCCGATGGCACCATTGTTATTATCTGGGAATCATGGAGATCTTGCCTAGCAATCTCCCAATTTCCTCTGAAGTTCATCGGTATACTTCCATAGTGAAACAGTTGCTGTGGGGCAGTATAACCAGGCTTGAATTGCTGCAAACATATTTCGCAAACGGTGTCGCCTTTCTCATTGCACCAACGCTGAATGCATTTCCGGTGCGCATACTTGAGGCTGCCACAGCAAGCACAGGGTGCCTCCATGCTGGTATCCCAATCCTCCTCTTGGCAAATCCTGCACTCCACCATCTTCCTCGCCGAGCCGCCATCGCCGTCGCCGTCGCAGCAGTAGTCGATCGCCACCGTCTCCGCCTGCAGATCGGCCACCTGCTTCCTGATTGCCGCGTCCAGCGTCGACTCCGTCAGCAGCCGATCCACAAGCAATGCCAGATGGTCGCCCATTAATCCTTGTCCAGGTATCAACAGCAAAGCTCCAGAGAAGGTTGAAGCTTGGAAGGATGGATTTGGGGTTGGGGTTAAGGCAAGGGGGGGGGGGGGGGATTTTTGGGGGAGGGGTTAAGGGAAGCAAGAGATGGAGTGGAGGGGGATGTAACAATGGAGGCCAAGCCAAGGAAGAACACTCTAGCTCACCTCACCTTCAACTCCTCCTCCTTCTTCCCTCAAATTTAAATTAGAAGAGAGGCAAAGAAAGAGAGAGGGGAATAAGTATCACCAAACAACAACTTCACTGATACTGCTCTTTTGCATGTTTCTTTCTTTCTTTGGAATAGCCTCCTCTCCCTGATTCCTTCTCACTTTCCCAAAGGCTCTCTCCATTTTCTGGAGCTTTGTAGTAAAGGCTCTCCTTTTCTTTTCTAGTACATGGTGCTCAGAAATCAGTGGAGTTACTGTTTACTAACTATTACTATTAACTGCTTTGAGCTAGGAATTGAGTAGAGAAAAGATAATCTCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0001300.1 | 1 | 1187103 | A | T |
| Osa01LNT0001300.1 | 1 | 1187249 | T | G |
| Osa01LNT0001300.1 | 1 | 1187266 | T | C |
| Osa01LNT0001300.1 | 1 | 1188610 | T | C |
| Osa01LNT0001300.1 | 1 | 1189099 | C | A |
| Osa01LNT0001300.1 | 1 | 1189441 | T | A |
| Osa01LNT0001300.1 | 1 | 1189706 | T | C |
| Osa01LNT0001300.1 | 1 | 1189820 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0001300.1 | osa-miR5337b | Cleavage | 3.5 | 19.867 | 1 | 21 |
| Osa01LNT0001300.1 | osa-miR166l-5p | Translation | 5.0 | 14.089 | 1 | 21 |
| Osa01LNT0001300.1 | osa-miR528-5p | Cleavage | 4.0 | 18.064 | 1 | 21 |
| Osa01LNT0001300.1 | osa-miR1850.1 | Cleavage | 4.5 | 19.297 | 1 | 21 |
| Osa01LNT0001300.1 | osa-miR2098-3p | Cleavage | 5.0 | 12.393 | 1 | 20 |
| Osa01LNT0001300.1 | osa-miR2106 | Cleavage | 5.0 | 16.692 | 1 | 21 |
| Osa01LNT0001300.1 | osa-miR3979-3p | Cleavage | 5.0 | 15.219 | 1 | 20 |
| Osa01LNT0001300.1 | osa-miR2863c | Translation | 4.5 | 12.553 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0001300.1 | 1 | yd1a | Morphological trait | Seed | R753 | C161 |
| Osa01LNT0001300.1 | 1 | nan | Physiological trait | Eating quality | C161 | R753 |
| Osa01LNT0001300.1 | 1 | nan | Physiological trait | Eating quality | C161 | R753 |
| Osa01LNT0001300.1 | 1 | nan | Physiological trait | Source activity | RG532 | RG472 |
| Osa01LNT0001300.1 | 1 | n+p1a | Resistance or Tolerance | Other soil stress tolerance | C161 | R753 |
| Osa01LNT0001300.1 | 1 | n+s1a | Resistance or Tolerance | Other soil stress tolerance | C161 | R753 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)