© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0241700.1
CAAGAACAGCTTTTTTGGATTTCTCTAGAATATTTTTAGTCCAAACAAGAATTTACATGTACAAAATACTACATGTACGACTATATTAATCACATAAATCGACTGAACAAATTTACACCGACACGTATCAACCTCATCTAATGAACACATAGCAACTTGCCCTCAAAAAAAACACACACACACATACAACTTGAGTACCAGTGAGCTTACTTCAGGAGCTTGGATTCGATCTCCTCCAATGTAAGTCCTTTAGTCTCTGGAACTTTTAGGATGACAAACACAAGGGAGAGCAACGATATGGCTCCAAATAGAAGGAAAATATTGGCTGGTCCAAGGAATTCCTGCAAGGGTGAAAAGGCAAATGTCACCAGTGCATTTGAGCCGAAATTTGTAAGTACTGCAAGGCTGATCCCACGTCCTCTTGTTCGGAGTGGGAAGATCTCAGAAACCATTAGCCAACTTATTGGACCAAACGATACCTGGTAAGAACCGACATACAGAAGTAAAGCACCAACAGCGACAAAAGGGAAGCTGTTCAGAATCTTGTAGTAAGCTGCTAATAAGAACAGTGAAACAGCTATTCCACCAATGCCTCCTATAAGTAGTGGACGCCTTCCAAGATCGTCAACTTTAAATACTGCAACACCTGTCATCAACAACTTGAACAACCCAATCAAAATTGATACTTTGGCAGCATCAGATGCAGCTGCAAACCCAGCAGTCTGAAGAATGGAAGTTGCATAGTATAGAACACTTGGCTGGCCTGTTATCTGCTGGAAGAGAACCAGTCCTCCTCCAATGATGAGTGCCTTCAAGCTAGCTCCCTCAAACATCTTCCAAATGTTCCCTTCAGATTCTTGTTCTGCATAAGCAGCCTTAATAGAGAGAAGGGTATCATCAATCTCATCTGCTAAGACCCTGTCACTCCTAAAGCGCCCCCTCAGTGATCTCAATGCCTGAATTGCCTTCTTTTTGTTATCTTCCACTGACGCCTTTCCTTGAACTGCCCTGAGAAGAAGCCATCTTGGTGAAGGCGGTAAATTCCACATACCAATAGCCATTATTACTGCCAGTGGAGCACCAAAACCAAACATATAACGCCATCCTCCTACCACATCAATTTCAAGACTCCCTACAAGGTATCCAGTCAGTATTCCTAATACAATAAACAACTCCTTTAAAGATATCAATGTCCCACGTATTCGCGAAGGAGAAGTCTCTGCAATATAAAGAGGTGCACCGTGCATCGCCAAACCAATACCGATACCATAGAGGAGACGGCCTATGATCAGAAGTACAAAATCAGGTGCAAATCCAGTGACCAGAGCACCAGAAATATATAAAGCTGCAGCTGTGACCAGTTCTATTCTTCTTCCTAGAAAATCGGCAACGCGATATGCAAGAAGCGAACCACCAAGAGCACCATAGAGTGAACCGCTTGCCACGAGCCCTAGCTGTATAGATGACAGGCTGAACCAAGTGGTTCCACTGAGTTCAGCAGATTGCAGAGATATGCATGCTCCAGAGGTTGCGCCAATGTCATAACCAAAAAGGAGTCCTCCCAATGCAGGGAACAAGAACGGAAGGATGATGGACGACCACGAGAACTCCTTCCCGGCCGCGCCATCTCCGGCGCCACCGCTGGAGGGCGCCTCGCCGCCCTGCGCATGTGTCCGCACGCGGAGCCTGGGGTTGGAGGTCGCCGTCGCCGCCGCCGCCGCGGCGGCGGCGGCGCCGGTGGTGCGGAGGAGCGGCTCGGCGGCCTGCGACGACACGTGGAAGGCGTCCATCGCCGCCGCGGATCGACCTGGAGACGCCAATCCACGAGCCCCGCGTGGGCGGGGAGCGTTGGTCGGCGCAGCCGCGATGGCGTGGGGGCTGGTGGTGAGTGACGACGAGGGGAACAACCCAACCTTCGCCGCCATGGCCGCGATTATAGTGAAAGTGAATCGAGCCTCACCTCGTGCTCGCGCGAGAAATAAAACAATTACTTTAATCGTTCATAATCTATTCATATCCACATTACAAAAACCACCACATATTTTTAGAAAACTTAATCTAAACACCACAATTTTTCTAAAAATTGAGCAAATTTTTCATAAATTTATTACTTCTAGTGAGTTCAAGAAGCGACAAAAAACGAAAGCAGGGACTGTTTAGTTTTCCAATTGCAAGCAAACGCTAGCAAAGGACCAAAATTTAATTTTGAAAATTGGCAAGGGCCGCGCGAACGCGTACCCCCTCCACCACAAATTATGACGTCCACTCTCCCACTTGGGGAGATGGTAAGCCAACGCGCCCACCAAGTGCAATGTGGGCCATTGGCCTAGGCCACGAGCCTTCCTGATCGCCCGTTGACCCCG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0241700.1 | 3 | 34555392 | G | A |
| Osa03LNT0241700.1 | 3 | 34555970 | C | A |
| Osa03LNT0241700.1 | 3 | 34556940 | G | T |
| Osa03LNT0241700.1 | 3 | 34557017 | G | T |
| Osa03LNT0241700.1 | 3 | 34557279 | G | C |
| Osa03LNT0241700.1 | 3 | 34557315 | C | T |
| Osa03LNT0241700.1 | 3 | 34558471 | A | G |
| Osa03LNT0241700.1 | 3 | 34560006 | T | C |
| Osa03LNT0241700.1 | 3 | 34560622 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0241700.1 | osa-miR5541 | Translation | 5.0 | 15.212 | 1 | 21 |
| Osa03LNT0241700.1 | osa-miR530-5p | Translation | 5.0 | 20.131 | 1 | 20 |
| Osa03LNT0241700.1 | osa-miR2099-3p | Cleavage | 5.0 | 12.375 | 1 | 20 |
| Osa03LNT0241700.1 | osa-miR2122 | Translation | 4.0 | 20.32 | 1 | 22 |
| Osa03LNT0241700.1 | osa-miR2878-3p | Translation | 3.5 | 13.29 | 1 | 24 |
| Osa03LNT0241700.1 | osa-miR5150-5p | Cleavage | 5.0 | 13.093 | 1 | 24 |
| Osa03LNT0241700.1 | osa-miR5160 | Cleavage | 5.0 | 19.076 | 1 | 22 |
| Osa03LNT0241700.1 | osa-miR5492 | Cleavage | 3.5 | 15.073 | 1 | 21 |
| Osa03LNT0241700.1 | osa-miR5494 | Cleavage | 3.5 | 17.25 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0241700.1 | 3 | nan | Morphological trait | Panicle/flower | G249 | RG418 |
| Osa03LNT0241700.1 | 3 | qSBR-3 | Resistance or Tolerance | Sheath blight resistance | G249 | G164 |
| Osa03LNT0241700.1 | 3 | spp3.1 | Morphological trait | Panicle/flower | RM130 | RG1356 |
| Osa03LNT0241700.1 | 3 | yld3.2 | Morphological trait | Seed | RM130 | RG1356 |
| Osa03LNT0241700.1 | 3 | qPES-3 | Morphological trait | Panicle/flower | G249 | G164 |
| Osa03LNT0241700.1 | 3 | QFll3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0241700.1 | 3 | QSn3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0241700.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | R1618 | G164 |
| Osa03LNT0241700.1 | 3 | Qbp1 | Resistance or Tolerance | Insect resistance | R1925 | R2443 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)