© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0241800.1
CGATTATTTACAGGCAATGCTGAATGCTCTTGCTAAAAACAAAAATGTTGGATGTAGCTCGTAAACCAGCAAAGCGTACCAGCTCTGTGCCCAAAAAGATTACGAGACTGCCAAGCTCATAGTCATATGTACATGATTTCCCTTTTCCCCACTTATATACTACTCCCTCCTTTCCTAAATGTTTGACACCGTTGACTTTTTTAAACATGTTTGACCGTTCGTTTTATTCAAAAACTTTTGTGATATGTGTAAAACTATATGTATATATAAATGTATATTTAACAATAAATCAAATGATAGAAAAAGAATTAACAATTACTTAAATTTTTTGAATAAGACGAAAGGTCAAATATTTTTAAAAAAGTCAACGGCGTCAAACATTTTGGGATTTTTAAAAAAGTCAACAGCGTCAAACATTTTGAGATGGAGATAGTATATATTTCACAGTTTAACTAAACAACCACAGTCCACAGGGATAAACAAGTAGGAAAACCGTCATTTCCCAGGTTTCGTTCTTTTCAGAGCAACAATCCTATTGGTGTAGAATATCCACCCTAGAACATAAGACAATGTCCTCCATTCTCTACACCCGGCCTTGGGCTTAGATATCGTTGCAACGAAGCCTTTCAGTGCAGCTCAAGGTCTTTGTGTGTCAAAGGATACAGATGGATCTGCACAACGATAGTAATCTTCACTGAATGAGGGATGACTGGCGCAATCATCATAAACCAAATTAGAGAACTTTATCCATTGTCTGTGATACTACGGGTGGTCCATGGCCACCAAGTGGGGGTAAATCGGGCTGATATTGATTTTCATTGCTTTCTGCAGTTCCCAGTTGACAAGGATCCAATGTCAGCTGATGGTATGCTTGACTGGCTCAAACCAAAACCATCAGTAGAAACCTGTGTTGGGAATTGGTTATATTCATTTGCGAGCAATGATGGAGATCTCACATCGAGGAGCTGTGAATGATTTGATGGAAGTGCTGTTTCATTGTTATAGGTGAATATACATTCTTCCAATTTTCATACGCTTGCTTCACAGCTGCATGTGCTTCAGCCTTATCCTTTTCCATAAGATCATCAGCACAAACGAACTTCTCAGATATTAGCCCTCTCACTTCTCCAACAACATTGAACACGACAGCTGTTTTGATTAGGCTGTGTGGATAGTACAAATGCACCTTGTCAGTGAGAATACAAGTTTTTGAATGCTCAACTGTGACCTCCCACATCTTTGTTGACATACCACTGCCCAATATCTGCATGGTTTGAGAATAAGAGGGCCAATATATCCATATATTTTGCTGAATAGCACTATCATGGCTGCATGTCCAACTGGAATTATGTGTGAATGATAGTTCCCCCATTGTACTGATGCCGTTAGTAAGGCCAACAAAAATGTCCCCAGAAGCAAGGTTCATTTGCCTTCCCTTGCTCTAATAATGTTATTGTTAAACTCCTGAGCTGTCCAGTCATCGCCTTCTCCACCTTCAAAATCCCCCTCTAAAACTACTATTTCAACTTTCATCAGGGACTCATCGCCTGATGCTACAACTTCTCTGGTAACAGTGTCAACTAGAGCAATAGTTATGCTTAAGGAGCTCTCTCCTTCAATCTTGGAGCTAGTGAAAATTGGAAGTGAAAGCTTAGTCATGAACTGTAGCTGGAAATTTTTCGATGTAGGTGGAACAACGTCCATGACAGTTCTAATGGGAAAATAAGAAATCAAGTTGTTAAACTTAAAGAAAGCTGCATTAGCTTAATGAATCTATACAGTGGCTGATACTTGTCAAATAGTAGTTTAAGACAGTGTTACAATGTCGTACCTTGCCATCATAATGGCATGATTTGCAAACGCTGACTCGATTTCTTCTTTCACCATTCTTCGGATGAGGGGCTCAATAGCCATGAACAACTTTTCAATGCTGCTTTTCTGCATCACCTCCGTGATCATCTCGCGGAGGGCAGGGACCATCTGATGCTTGGGCTCCCCGTAGCGGTGGGGCGGCGACGAGCTCCCAGCCCCAGATTTGGCTGGGCCAGGGGCCCCCATGCCTCCGCTCTGCTACCGCTGCTCTCCTCCAGCTGCCGCTTCTGCGACATCTCCGGCCACCGCTGTGCACCTCG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0241800.1 | 3 | 34602925 | A | G |
| Osa03LNT0241800.1 | 3 | 34603026 | C | A |
| Osa03LNT0241800.1 | 3 | 34603077 | T | A |
| Osa03LNT0241800.1 | 3 | 34603089 | G | A |
| Osa03LNT0241800.1 | 3 | 34603692 | C | A |
| Osa03LNT0241800.1 | 3 | 34604832 | C | T |
| Osa03LNT0241800.1 | 3 | 34602856 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0241800.1 | osa-miR812s | Translation | 3.5 | 9.557 | 1 | 24 |
| Osa03LNT0241800.1 | osa-miR5799 | Translation | 3.5 | 9.557 | 1 | 24 |
| Osa03LNT0241800.1 | osa-miR396a-3p | Cleavage | 4.0 | 13.692 | 1 | 20 |
| Osa03LNT0241800.1 | osa-miR396b-3p | Cleavage | 4.0 | 13.692 | 1 | 20 |
| Osa03LNT0241800.1 | osa-miR396c-3p | Cleavage | 3.5 | 13.692 | 1 | 21 |
| Osa03LNT0241800.1 | osa-miR812a | Cleavage | 4.0 | 8.987 | 1 | 22 |
| Osa03LNT0241800.1 | osa-miR812b | Cleavage | 4.0 | 8.987 | 1 | 22 |
| Osa03LNT0241800.1 | osa-miR812c | Cleavage | 4.0 | 8.987 | 1 | 22 |
| Osa03LNT0241800.1 | osa-miR812d | Cleavage | 4.0 | 8.987 | 1 | 22 |
| Osa03LNT0241800.1 | osa-miR812e | Cleavage | 4.0 | 8.987 | 1 | 22 |
| Osa03LNT0241800.1 | osa-miR1436 | Cleavage | 4.0 | 14.387 | 1 | 21 |
| Osa03LNT0241800.1 | osa-miR812f | Translation | 4.5 | 18.191 | 1 | 24 |
| Osa03LNT0241800.1 | osa-miR812g | Translation | 5.0 | 9.557 | 1 | 24 |
| Osa03LNT0241800.1 | osa-miR812h | Translation | 5.0 | 9.557 | 1 | 24 |
| Osa03LNT0241800.1 | osa-miR812i | Translation | 5.0 | 9.557 | 1 | 24 |
| Osa03LNT0241800.1 | osa-miR812j | Translation | 5.0 | 9.557 | 1 | 24 |
| Osa03LNT0241800.1 | osa-miR2874 | Translation | 4.0 | 6.547 | 1 | 24 |
| Osa03LNT0241800.1 | osa-miR1436 | Cleavage | 4.5 | 5.055 | 1 | 21 |
| Osa03LNT0241800.1 | osa-miR1439 | Translation | 3.5 | 4.714 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0241800.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | R1618 | G164 |
| Osa03LNT0241800.1 | 3 | nan | Morphological trait | Panicle/flower | G249 | RG418 |
| Osa03LNT0241800.1 | 3 | Qbp1 | Resistance or Tolerance | Insect resistance | R1925 | R2443 |
| Osa03LNT0241800.1 | 3 | qSBR-3 | Resistance or Tolerance | Sheath blight resistance | G249 | G164 |
| Osa03LNT0241800.1 | 3 | yld3.2 | Morphological trait | Seed | RM130 | RG1356 |
| Osa03LNT0241800.1 | 3 | spp3.1 | Morphological trait | Panicle/flower | RM130 | RG1356 |
| Osa03LNT0241800.1 | 3 | qPES-3 | Morphological trait | Panicle/flower | G249 | G164 |
| Osa03LNT0241800.1 | 3 | QSn3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0241800.1 | 3 | QFll3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)