© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0241900.1
CCATCAGAAACGTATCGATGACTGATGTGTTCCACTGACTCATCAGCATGTTTTACTTGCATCGAGTGAATCCATATATTCCAGACAGGGTTCGTTCTTGCCGAATGGGGCAGGCACGAAATGTCATATAGAACAAGTGAGCAACTAACAACAACATGCATACTCTGATTCTCCCTACTAAGTGCTACATCCTGAAACACAACTGGAAGTCCAGCATTGTCTATCAAGTTAGCGCAAATCCAGTATCACGAACTCATGCTTATGTGCTGGGTTCTAGGCAAGATTGTGGATATTGGGAGTCACGTCCACTGCATATAGTGAAGCAAGAGAGCACTGCAAAGGCATAAGGCCATCTCATTGCACATTAGGACGATCTGATTGCCCAAACTTCAAAATTGTGAGACATTCTGTGTCTTATCTTCCCTTGTTCGGCCAGATAACATCGCATCTGCAAAAGGAAGGAGGCAGCAAGCTCCTGAAAACTCACAGTGCAAGGAGTTCTGATTCCTTTTCTTCTACCAAGGTTTCATCAGTCAAATGGGCAGAACCATTATCAGCTTGGGACTCCCTAGTGTACAATTTGGAACCAGGGGATGGCAAATGAGAGTTTGTCATGGGAACAAAACCAGAAATTGCAGCACCATTGGAAGAATCTATGGCTGCCTGGAGCTTTTTCAACTGGGACTTCAAACATATGATTCGTCCCTTGTTCCATTTTGGATAATGGAAGGATGATGATAGTGTATCATTCAGAAAAGAGTACACAACTTTTGCAATCGGCAATCCCCTTGTAACTGTGCTTTTCTCCATTTGTCCCCTCCTGGCAATCAGAGAAAATACAACAACTGAGGCTAACTGAGGAAGATCTTCATCGCCTTTTAGTCTATCATAAAGTTTATTGAGCCACACTGACACAGCCACTAATGATCCACCTACTGACATCCTATGCACATCTGCAGACCAGACCAGCTTGGTATCACGAAATAACTCAGGGAAGAGCCCATATTTTAATGCTTGATCCAAAACCCTTGCAGCTCGACCCTTCTGGCCAAACCACCAAAGGACATCAAGGAGTGCATTAAAGAATCGTAAACTGTAGTCACAGCCTTCCAAGTTACTGTTGTCAAGAACATATTCGACCATTTGCCAATTGGAGTCATCGTCATACTCCCCTTTGATCATGGAAGCAATCACTTGATGTGTACTACTAGCACGGTTTGTTTTCATTTCTTCCAACAGATCATAAGCATCTGTCCACCTGTCATTCCTGGCATAGAGTGACAACATCATGCAATAAGCAATAATGCTAGGAACAGTCACCATGGACTGAAGTTCTTCAAACTGCTCTTTGCTCTCATCTATAACACCTGCTATGCAGTAGGCATTGAGTACCCCCTCAAGGGAGCGTTCATCTGGATTAAACCTGGACTTCCGCATCTCCATGTATGCCTTAACTGCATCATCTAACTGTGCACCCTGGCAATACGCTTCAATGAGAGCATCGAATGAATCCTTGTCTTTCTGAATAGCAGCATTGTTGGTCATTCGAGAAAAGATGGCCTCAGCCTCCTGGAAAAGGCCACCCTTTGCAAATGCATTTGCAAGAGCATTGTAGGTCTCTATAGTTGGCAAGCTTCCAATTTCAGTCATCATGTTGAATGCAACATAAGCCTCCTCATACATAGCTGCATGGCCAAGCGCTTCAACTAGGCCAGTGTAGGCCTTTGCAGTAGGCACCATTCCTTCTGTTGTGATATAGTCAAGAACTTCCCTTGCATCCTCATGGAGTCCACCACGACCACACGCAACCATGACGTTTTCACATGTATCAATATCAGGCTCTACTTCAGAGTGAAGCATATCTTGGAAGAGCTCCACCACCTCCTTGAAGAAGCCACCGTCCCCAAAAACGCGGAACAGGACATTGTATGTGGCTGTGTCTGGAGGTACAGTTGTTCTCATCTCGCGGAAGAGCTCGCGCACGCCATCAAACCTCCCCTGTCTGCCATACAGATCAAGCAAGACACGGTATGTCGCAGCTGTCGGCGGACAGCCATCAGCCTGCATCTGCCGCAGCACAGCTACCGCTTCAGCAGTGGCACCAACCAGCGTGTGAGCTTCCATCAGCCCAAGATACGCAGATGGGTCTGGAGTGTGCCCCGTTGCTGACATCTCGGCAAACAGCTCGGCCACACGGGAGAGGTTACCAGCACCAGCGAAGGCATCAACAATGTGGCGGTAAGATGCGGTGTCCGGCAAGACACCGGCCTCGAGCATGGTGCGCAGCAGCATCTCGGACTGGTCGGAGAGAGCGCGTACAGCGGCAGCGGCGAGGAGGGTGTTGTAGGTGGTGAGGTCGGGACGAACGGAGGGGGAAGGGTCATGGCGCATTTCAGCGAAGAGGCCGAGCAGCATGTCGAACGGGACCGGCGGATCGGTGGCGCGAGCGCAGGCGGCGAGCACGGTGTTGTACGTGGCGGCGGTGGGCGCGACGCCGGAGGCCTTCATCTGGTCGAGCAGCTCGCGGGCCTCCTCGTGCAGCGCGTTGCGCGCGTAGGCGGCGATGAGGGAGGTGTAGGAGAGCGCGGTGCGCGACTCGGAGGGGAGGTCATGGAATACCTCGAGGCACTTGTCGAGCAGGGCGGGGCCCTGGCGCCCGAGCACGCCGATGACGATGGCGTGGATGTGCTCGTCGGGGCGGCACCACGACTGGCGCTGCATGTACTTGAACAGCCGGAGCGACCGCTGCCAGTCGCCGCGGCGGGAGAACTCGCGGTACACCGCGGCGAAGTCCTGCAGCGTGAGCCGGTGGCGCGCCGTCTCGAGGCACCGCGCGATGGACCCCCGCGGCGGCAGGTTGCTCAGCCGGTCGATCAGCGACTCCACCTCGTAAGAGTGCCCCCCATTCTCCACCACCACCGCCGCCGCCGCCGCCTCCCTCGGCGCCCTCGCGGCCACCACCGCGACCCGCCCCCCGCCCCCGCCGCGTCTCCTCGCCCTGCAACACCACCTCCTCGCGGGCGGGAACAGCAGGTCGCAGTAGTGGTAGGACGGCGACGCGACTGTGGCGGTGGTGGAGACGAGCGCCATGGGAGCATCCACCATCCGCCGCCGCCGACGACGACGAGGAGGAGGAAGAGGAGGGGTTTAGGATTCCACTCCCTTCGCGTAGTAGATTTTGGGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0241900.1 | 3 | 34614398 | C | G |
| Osa03LNT0241900.1 | 3 | 34610234 | T | A |
| Osa03LNT0241900.1 | 3 | 34610436 | G | C |
| Osa03LNT0241900.1 | 3 | 34611659 | T | C |
| Osa03LNT0241900.1 | 3 | 34611671 | A | T |
| Osa03LNT0241900.1 | 3 | 34612264 | C | T |
| Osa03LNT0241900.1 | 3 | 34613059 | C | T |
| Osa03LNT0241900.1 | 3 | 34613338 | T | C |
| Osa03LNT0241900.1 | 3 | 34613467 | A | G |
| Osa03LNT0241900.1 | 3 | 34613758 | T | C |
| Osa03LNT0241900.1 | 3 | 34612897 | C | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0241900.1 | osa-miR166a-5p | Cleavage | 4.5 | 23.541 | 1 | 21 |
| Osa03LNT0241900.1 | osa-miR166c-5p | Cleavage | 5.0 | 23.541 | 1 | 20 |
| Osa03LNT0241900.1 | osa-miR166e-5p | Cleavage | 4.5 | 23.541 | 1 | 21 |
| Osa03LNT0241900.1 | osa-miR159a.1 | Translation | 4.0 | 22.102 | 1 | 21 |
| Osa03LNT0241900.1 | osa-miR159b | Translation | 4.0 | 22.102 | 1 | 21 |
| Osa03LNT0241900.1 | osa-miR159c | Translation | 4.5 | 22.102 | 1 | 21 |
| Osa03LNT0241900.1 | osa-miR159d | Translation | 4.5 | 22.102 | 1 | 21 |
| Osa03LNT0241900.1 | osa-miR159e | Translation | 4.5 | 22.102 | 1 | 21 |
| Osa03LNT0241900.1 | osa-miR159f | Translation | 3.5 | 22.102 | 1 | 21 |
| Osa03LNT0241900.1 | osa-miR408-3p | Cleavage | 4.0 | 19.234 | 1 | 21 |
| Osa03LNT0241900.1 | osa-miR529a | Translation | 4.5 | 22.914 | 1 | 20 |
| Osa03LNT0241900.1 | osa-miR1882a | Cleavage | 4.0 | 16.593 | 1 | 24 |
| Osa03LNT0241900.1 | osa-miR1882b | Cleavage | 4.0 | 16.593 | 1 | 24 |
| Osa03LNT0241900.1 | osa-miR1882c | Cleavage | 4.0 | 16.593 | 1 | 24 |
| Osa03LNT0241900.1 | osa-miR1882d | Cleavage | 4.0 | 16.593 | 1 | 24 |
| Osa03LNT0241900.1 | osa-miR1882e-5p | Cleavage | 4.0 | 16.593 | 1 | 24 |
| Osa03LNT0241900.1 | osa-miR1882f | Cleavage | 4.0 | 16.593 | 1 | 24 |
| Osa03LNT0241900.1 | osa-miR1882g | Cleavage | 4.0 | 16.593 | 1 | 24 |
| Osa03LNT0241900.1 | osa-miR1882h | Cleavage | 4.0 | 16.593 | 1 | 24 |
| Osa03LNT0241900.1 | osa-miR5500 | Cleavage | 4.0 | 23.005 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0241900.1 | 3 | Qbp1 | Resistance or Tolerance | Insect resistance | R1925 | R2443 |
| Osa03LNT0241900.1 | 3 | nan | Morphological trait | Panicle/flower | G249 | RG418 |
| Osa03LNT0241900.1 | 3 | qSBR-3 | Resistance or Tolerance | Sheath blight resistance | G249 | G164 |
| Osa03LNT0241900.1 | 3 | spp3.1 | Morphological trait | Panicle/flower | RM130 | RG1356 |
| Osa03LNT0241900.1 | 3 | yld3.2 | Morphological trait | Seed | RM130 | RG1356 |
| Osa03LNT0241900.1 | 3 | qPES-3 | Morphological trait | Panicle/flower | G249 | G164 |
| Osa03LNT0241900.1 | 3 | QFll3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0241900.1 | 3 | QSn3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0241900.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | R1618 | G164 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)