© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0242100.1
CCGATAACAAGCAAAGGTATCCTAGAGAATCACATTTCTACACATGTTATGGTGTTGTGCATACATCTTCGGCCTTCAAAGAGTTATGAAATGTTATACTGAGCCTCTATCATGGACCAGAAAAAAGGCAACATATGTGCACTTGAAACGCTGTTACAGACACCACCCAATGTGGTTCAAGTTTCTTCAGGCAAAATCCTGGCTCGTCATTGCACTCGACTACTGTTACTAGTATTGATGAATAACACGAAGTACAAACTAATTTGATTAATTTTCCTCATGAAGCAACAAATCCTGAGAGGAATTCCAGTATGACATCATCCAAGAGATCACCATGTAACATCCTGGCTATATGCCATCCCACCATGTTGATGCCCTCACCGAATTCCAGCCATTCTGGATCAAGAATCTTGTCATCAGGATGTGCTACAGCAAGCTCTTCCTGCTGCCTGACCATTGTTTGCCATACAACCTCAACAGGTCCTTCAGGGCCCCAAACAGGGCAGCAATTTCTACTCAACTTTGCCCACGGATGCGTGTCGATGCATGGTGCGAGGATCTCAGAAAGAACAGAATTCGCAAGATCAAACAGAAGCCTCCTTTGTGGTCTTGGCCATGTAGCAACCTTGCTGTACTTCCCCTCAAGCTTGTCGAAGACATGAGGACCAACAAGGTAACCAGAAGATTGCCATGACTTGAACAAGAGCTGTGAGTCCGCGACTATCACACCGGAGCTTATAAGTATGTCAAGTAGATAAGAGAATTCCTTTTCCTCCTCAACTTCAAATGCTTCAAGAGACTGGTCAGAAGAATCATTGTCATTGTCGCTGGACAAGGATACTTCTTGCTCATATCGGAGCTCACAGCCATATATTTGTTTATCGATGCTAGGCATGACTTGCGAGTCATTTTTTAAGTATCCAGAACAACAACTGTCTTCATCAGTTGGAGGCTCAAGAATAGACACTGGGCTTGGTCGGTCAACCTCTTTCAAGCTTCTACGAGACTTTGCCGCACAAGTATGATCAGAAATAGTTATGGCTTCATATACACCGCAATGGAAAGGCGATGCTGAAACCTTTTGTTCCCCAGATAATCGTGATCCAAACGAAGAATGCACTGTTTCAGTAGGTTTTCTCAACAAGTCTTCATCTGTTGTGAAAAGTACTTTCTCATTTATGCAGGCAAAAGTTGAAAAGTCATCAGTTAAATGCCATGAGTTGTTTCTGGTATTATCATAAGAAGGGAAAGAAGATCTATGTTGCTCCAAGGTGTGATATCTTGCACAAGAAGCATTCCTCAAGTCATCTTGGGTGGGACTTGAAATTTGCTGCCGTGTTGGTTTATCCCAGAAAGAATCGAAGTGAAACTGACCACTGTTGTGACTAATTGATGTATTTGAGAAAAAAATATCGTGAGGGGACCTTTCACAGGAAGAATTCTTGTCCAACAAACTGTGAGGAGGCAATCGAGGTGCATGCTTTGGCAACACTATAAAGCATCCTTCCTTGTCATTGTTGTTGCCCCGGTTAAGTTTATTGTCTTGAATCTGCACATGTGAGTCTGAATCCCTCTTCAACCTCTCTGAATCAGATAAAGCAAACATCTCTGCAAGAGTTTTTGAACCAATGGCACCTTCCTCATACTTGCGGCGGATTTTCCAGGGTGAGCTATTTGATGATGACCTGTTGCTTTTTCTGGAGTTAACTTCACTGCTAACACACTTCTGAGATGATCCAGTGTTATCCGTATCCACTGTGTTATATTGATCAAGTGATGAATCTTGTCGCTTTAACAGTGAATCTACAGCATTGCTAGTCAAGTGTCTTTCTCCTTTTATTCTAGGCACATTAATATCTTTAGTGCCTAAAAGATTTTGCGAACCCCTGTTCGTAGTAGAAAACTCAGCCTGCTTCATCTTTCTCCTGAAATTCTTATTGACATCAGAGGGTTCTGGTGTAGAAAAGGCATTACCTGAATGTTGGACTTCCCCTAAGCCTAGCTCCAGAACAACAATTTCTTTAAGTGAAGAGTTACCTAAACCAACAGGGTACTTCCTGAAAGTACTTGAAGTACTATCTTTCTCATATCGATAATTTGGGGAACAATTCACATCATAGGGGTGCTTCTCAAACAAAGGATTATTTATCTCTAGCGAGTTCAAGCGATCAAAACCATCTTGGTTCACTACATTGTTATCAAATGTTTCATCGCCGTAGGGAGACTTTGATGGCATAAGCTTTCTTAGCTTTAATGCACTTCGCTTCAAGCTTGGCAACCCTTTAGGGAAATTATGTGATCTCTCTTTCGTGACGGCCTCTTGTGGTTCCTCTGACACTTCGAATACATCCTTGAATTCCTGGTGCTGATTGTGGGCTACATAAGCAGGTGGCAACACATCAAGTCCCATCAGTTTTGCAATCACACTAGGTGATGGTCTCCTGTGCTCCAATTCCTTCAACTGATCCTTCCCGACAAGTGTTTTGGTTGGACAGCTGTTATTTCTTCGTGGCCTGCACTCCTTGTACCGATGCTCAAGTGAAATCTGTTCCATCTTGGAGATTACTGTATGGAGGATCAGTTGAGATAAAATGTTGCTACATCATCCCACAGGTGAAGAGAACTTCTGCGCGTGGGTGCTCAATGCAGCGGCGGAAGAAGATGCCGCCGCCAGTCGTCGGAGGGAGATCGGCGCAGGCGGCGGCGGGCGAGTCAAAATCGCCAGCCGACGTGGGGACGGGAGGATCCTCGTCGAGTCGGGAGGGGAGGAGAGGGGAGTAGTGAGTGAGTGTTGTTGGCGGTCCCGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0242100.1 | 3 | 34702598 | T | C |
| Osa03LNT0242100.1 | 3 | 34702905 | C | G |
| Osa03LNT0242100.1 | 3 | 34702682 | A | G |
| Osa03LNT0242100.1 | 3 | 34702790 | A | G |
| Osa03LNT0242100.1 | 3 | 34702791 | T | C |
| Osa03LNT0242100.1 | 3 | 34702991 | A | C |
| Osa03LNT0242100.1 | 3 | 34703762 | A | C |
| Osa03LNT0242100.1 | 3 | 34704265 | C | T |
| Osa03LNT0242100.1 | 3 | 34704456 | G | C |
| Osa03LNT0242100.1 | 3 | 34705306 | C | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0242100.1 | osa-miR5527 | Translation | 5.0 | 14.381 | 1 | 21 |
| Osa03LNT0242100.1 | osa-miR5794 | Cleavage | 5.0 | 13.678 | 1 | 21 |
| Osa03LNT0242100.1 | osa-miR5516b | Cleavage | 4.5 | 20.87 | 1 | 21 |
| Osa03LNT0242100.1 | osa-miR6250 | Cleavage | 4.0 | 15.905 | 1 | 22 |
| Osa03LNT0242100.1 | osa-miR167h-3p | Cleavage | 5.0 | 12.972 | 1 | 21 |
| Osa03LNT0242100.1 | osa-miR1847.2 | Translation | 4.5 | 21.348 | 1 | 24 |
| Osa03LNT0242100.1 | osa-miR1428b | Cleavage | 5.0 | 15.3 | 1 | 21 |
| Osa03LNT0242100.1 | osa-miR1428c | Cleavage | 5.0 | 15.3 | 1 | 21 |
| Osa03LNT0242100.1 | osa-miR1428d | Cleavage | 5.0 | 15.3 | 1 | 21 |
| Osa03LNT0242100.1 | osa-miR1865-5p | Cleavage | 4.5 | 18.685 | 1 | 24 |
| Osa03LNT0242100.1 | osa-miR2920 | Translation | 5.0 | 16.865 | 1 | 23 |
| Osa03LNT0242100.1 | osa-miR395x | Cleavage | 4.5 | 15.296 | 1 | 21 |
| Osa03LNT0242100.1 | osa-miR5145 | Translation | 4.5 | 20.259 | 1 | 24 |
| Osa03LNT0242100.1 | osa-miR5504 | Translation | 5.0 | 14.42 | 1 | 21 |
| Osa03LNT0242100.1 | osa-miR5516a | Cleavage | 4.5 | 20.87 | 1 | 21 |
| Osa03LNT0242100.1 | osa-miR5518 | Cleavage | 4.5 | 18.603 | 1 | 21 |
| Osa03LNT0242100.1 | osa-miR167h-3p | Cleavage | 4.5 | 13.88 | 1 | 21 |
| Osa03LNT0242100.1 | osa-miR2105 | Cleavage | 4.0 | 13.777 | 1 | 20 |
| Osa03LNT0242100.1 | osa-miR5502 | Translation | 4.5 | 21.113 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0242100.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | R1618 | G164 |
| Osa03LNT0242100.1 | 3 | nan | Morphological trait | Panicle/flower | G249 | RG418 |
| Osa03LNT0242100.1 | 3 | Qbp1 | Resistance or Tolerance | Insect resistance | R1925 | R2443 |
| Osa03LNT0242100.1 | 3 | qSBR-3 | Resistance or Tolerance | Sheath blight resistance | G249 | G164 |
| Osa03LNT0242100.1 | 3 | spp3.1 | Morphological trait | Panicle/flower | RM130 | RG1356 |
| Osa03LNT0242100.1 | 3 | QFll3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0242100.1 | 3 | qPES-3 | Morphological trait | Panicle/flower | G249 | G164 |
| Osa03LNT0242100.1 | 3 | yld3.2 | Morphological trait | Seed | RM130 | RG1356 |
| Osa03LNT0242100.1 | 3 | QSn3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)