© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0242700.1
GAAATTGTAGCTTGCGCTACCTGTCCAAACAATTCAATCATGTAGGCTCAACATATTTTGCGCTTTACATTCCAACAATCTTTGCCACATACATGGCCCTTTCTTCTCTTCTGATTTCTAATTCTCCATATGAAAAATCACAGCAAGATGAATCATGATTTTGAATGGCATCGCCTTAAAGCGAGTCAGGATGGTTGAGCATCTAGGACCCCTATTATTGGGGTGTTTTCCTGCATAACTATACCGAACAAACACCATATGTTTTACTTCTTTCTGCTCACAAAGAAGAATCGCCATTATCGGACCTTCTTCAGTTACCATTGCTTCTTGCCCTTCTTCTTTTTCTTACTACTGCTATTACTACCCTTGGCATTGCTTCCACTTCCAGGGGAAGGGGGCTCGTTTTGCGCGCCAAACGATTCAAACATGCCAGACTGCAGTGCATTCTGCAACCACTCGAAGAACTCCTCTTCATCGATTCCGCCATCCATGTTTACACCATTAGGGATCCCTCCACCCCTCTGCGCCGAGGTGCTCCCCTTGCCACTATTCTGCTTTAACAAGCTGGCATTGACATGGAAGCTCGGCTTGTGAGTGTTCGCGGGGCATCTCATTCCCTGACAGGTGAACCACTCGGTGACATCGAAAATGATGCTTTCAGCACAAACATATGCATGAGGCAATTCAGGCTTGTGCAGCAACCCAAATAGAACTGGTTGAAAAGACTGCTCAACCCATCCATCCCCATCTTTAGCTTGGTGAAAATCATTGCAGTCCTGACACCATCTAGCTTGCGATTTAGCTCTTCCTGTATAAATCCACAGGTGGAAGTCACCACATTTCTTGCAGGCTATTCTTCTTGATAAACCATAAGGTCCTTCATCAACACCTTCAGAAGGGCTAAACCCTTGTCGAAAAATACCACTTCCTCCTTTCTTTTGAGAAGCACTCTGAAACCGTCTGAAGTAGTTCAAAAGCTCCTCCCTCCTTAGCTCATCATCATATGTCTTCCGTTTCAAAGAATCAAGAAGAACCTCGTATGCATTTTGAAGTTTTTTAAATGCATCAGCAGCTTTATCATTGCCCATGTTCTTATCAGGGTGGACTAACATAGCCTTTTTCTTGTATTCTCTCTTGAGTAATGATACATCTATATTTTCATAACGATGGAAGCCTAATGCTGAATAGTGATCAGTGCAGTTCAGTAAACGAGACACTTCATCTTCAGAGGTCAACTCTTTCTCAGCTCCACTAGTTGAAGGATCGCCAGGGCCCCGATCTGATGGTTGAGCATACTCGGACTGTGAGGTATTATCTGCTGATGATTGTCGAAATTCTCCAAAGAAGCCTGATTTGCCTGAATTTTGCTCAGAGTTCCTTGAAGAGCCAGCAGATTTGTTATTGTCTACATTGTTCTTTAGGAGTTGCACAAGAACATCACTTGAAATGAAAGATAAGTTCAGGCTCAAAAGTAACCCAAGCCATCCAACATAGTTTTTTGCACAATACATTGAATATAGGCAGGTGACAAGCAATGCAAAACGTTCATGCTTCAGGAAAAAGGAAGCACCTCCGAGAATTATGATGCCGCTTGTTGTCCAAAAGCTTCCATACAGCCACAAAATCACCACTGCAGCCACTGCGATAACCAGAACAGCAAAACCAAGACCAACAAAGGCAACTACAGCAGCAGCAATTACCATTAATATTAGCATTTTCTTTAGTCCAATCATTGCAAAAACTGATAGTGTACTGCACCAAAGTACTGTAAGGAGTGAGTTTGTCCCTAGGCGTAGCAAAGAATCGAAGCCCCTTATGTTGCAGTTGAACCAAACTGCCAACAAGAGCAATATCAACTTTCCAGCACTAAACATCCATGCCCGACAAATAGGATAAGTATACTTAATTTTGCTGCGGACATAGTCATGCCCCTTGTGCACAATAGCCATGAAAGTTGTGATTGCTGGCCTATTTCTCTCAAGTAGCAATTTGCTTTCTTCTATTATATACATCACGGAAGCCCTAAAAATGGATGCAGCCATGCAAGCTATGCACCTGGTCTTCTCCAAAACTTTTTCTGCAAAAACTGGCATTGGGGTTTGTTCTATCGATGAGTTTTTACCACATCCACGCCGTGATGATCTCTTGCTATCTCTTCTTGCTTTGGAAGTGCTGGATGATAACTCATTGTCATTTTCTCCTGAATTACCTATATCATAATTGGTGTCCACTGACTGCTTTTTTGAGGCTCTGTCATCTGATTTGCCAGAGGATGAAATGCCATTGCTTCTGTTATTCTTCTTGATACCTTTTGTTTTCTGGCCATAGTTTACTCCAGAAACATTTGAACCACCTTGAACATGTGAACTTCGATTTTCACCATCCATCACATCACTTTCTGGTGTATTTAGTACCTCACAATTAGCTGCATTTTGTCGGTTAGGTGAAGCATGATTCAGAACACTTTTACTTTGACTTCCTTTTCGGGCCATGGTTTCAAAGTAGATTCAAAGCTTAGGCAATGTTATACAAATCTGTCCATATTTCCTTGGTAAAACAGTACCGGGATGCGATGCGGCGGAAGCAGCAGGGCGGACGGACGACGGCGCCGCTGCTCGCCCGCTCGCGGTGGCGGGACGGATGGGGATCGGCGGTGGCGCAGGCGGCGGCGGGCGAAGTCACTCACGAGGAGTCGACGCCGAGAGGGGACGGGGGAATTTAGGATTTCTGCGGGGAAAATATCCTCGACGCACCGCACTGCACGACG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0242700.1 | 3 | 34992038 | C | T |
| Osa03LNT0242700.1 | 3 | 34992373 | A | T |
| Osa03LNT0242700.1 | 3 | 34993658 | A | G |
| Osa03LNT0242700.1 | 3 | 34993894 | G | T |
| Osa03LNT0242700.1 | 3 | 34995368 | A | G |
| Osa03LNT0242700.1 | 3 | 34995392 | A | C |
| Osa03LNT0242700.1 | 3 | 34995668 | C | G |
| Osa03LNT0242700.1 | 3 | 34995745 | G | A |
| Osa03LNT0242700.1 | 3 | 34995844 | A | G |
| Osa03LNT0242700.1 | 3 | 34995981 | A | G |
| Osa03LNT0242700.1 | 3 | 34997322 | A | C |
| Osa03LNT0242700.1 | 3 | 34997506 | G | A |
| Osa03LNT0242700.1 | 3 | 34997766 | A | G |
| Osa03LNT0242700.1 | 3 | 34991944 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0242700.1 | osa-miR5528 | Cleavage | 5.0 | 12.398 | 1 | 21 |
| Osa03LNT0242700.1 | osa-miR5820 | Cleavage | 4.0 | 12.571 | 1 | 21 |
| Osa03LNT0242700.1 | osa-miR169p | Cleavage | 4.5 | 17.139 | 1 | 22 |
| Osa03LNT0242700.1 | osa-miR166i-3p | Cleavage | 5.0 | 18.664 | 1 | 21 |
| Osa03LNT0242700.1 | osa-miR1425-3p | Translation | 5.0 | 16.824 | 1 | 21 |
| Osa03LNT0242700.1 | osa-miR1857-5p | Cleavage | 5.0 | 13.971 | 1 | 21 |
| Osa03LNT0242700.1 | osa-miR1857-5p | Translation | 5.0 | 10.011 | 1 | 21 |
| Osa03LNT0242700.1 | osa-miR827 | Translation | 4.5 | 17.977 | 1 | 21 |
| Osa03LNT0242700.1 | osa-miR2098-3p | Cleavage | 4.0 | 13.656 | 1 | 20 |
| Osa03LNT0242700.1 | osa-miR2105 | Translation | 4.0 | 13.665 | 1 | 20 |
| Osa03LNT0242700.1 | osa-miR5071 | Translation | 4.5 | 21.333 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0242700.1 | 3 | QFll3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0242700.1 | 3 | QSn3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0242700.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | R1618 | G164 |
| Osa03LNT0242700.1 | 3 | yld3.2 | Morphological trait | Seed | RM130 | RG1356 |
| Osa03LNT0242700.1 | 3 | spp3.1 | Morphological trait | Panicle/flower | RM130 | RG1356 |
| Osa03LNT0242700.1 | 3 | Qbp1 | Resistance or Tolerance | Insect resistance | R1925 | R2443 |
| Osa03LNT0242700.1 | 3 | nan | Morphological trait | Panicle/flower | G249 | RG418 |
| Osa03LNT0242700.1 | 3 | qSBR-3 | Resistance or Tolerance | Sheath blight resistance | G249 | G164 |
| Osa03LNT0242700.1 | 3 | qPES-3 | Morphological trait | Panicle/flower | G249 | G164 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)