© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0242800.1
GTATACAAGCTTTTTTACGACCTAATAAGAATTGAATGCGATACAAGGATGAGCTAACAATTTTCTATGAGAATATCAGATAACGCTTGCCAAAACGCCTTATTGTTTTGTCGCCAAATGAACACGAATGCCAGAAAACGATAAAAAGAAAAAGGAAAAGGAAAAGTGTAGAAGACATTCAAAAAGTTTATACATGTTACACGTATATGAATCTGCGCGATCCGTATGAGATTGTCGGGTAAAGATAGATAGGTGATCAAGACTCGGACTTATCAGGTGGGGTTCCCACCAGCCAGCCCCACATGCCACTGGAACTTTGCCTTTGCTTTGCCTCCAACGCTGCTTGCTCAGAGGCAGCCTTCTGTCTTCGAAGCAGCTCAACCTCCCTTTCCAATGCATCCATACTCTGGAGCTTCTGCCGTAGCTCCGCAACATCCACCTCAAGTTTGAAACATCTTGACTGTTCAGCAGCAAGTTGGCCACGGACAGTTTGAAGTTCCTTCGTCAGCTCTGCATTTCTAGCCTCTGCTTCAGCAATCTCTTCTTTAAGCTGTATAGTTTGCACTTGCTCCCTGTTAAGTGCTGCTTCTAGTTCCTCTTTCTCAGCTTTAAGAGCTACTAAAAGTTCGTTTGCGTCATCCTTCTTCAGGTCTGAATCAGCACTGTCCATGGCAATCTCACGGATCTTCCCATCATGAGAAAGTTCAACCTCGGGTTCCAGAACGCTGGATGTACCATCTGATGCATGCTCTTTTGTTTTTGACTGCAAATCTGATTTGAGGGTAAGTTTAAGAGCAAAGACCTCATTGCTGTATCGTCCATTGTATCCTCCAAAAGAAATGAGATAATCATCTCCATTGTAATTGCTATGCACTAAAGTCATGCCCTCACTGGCAAGGGGAACACGACCTTCTACAGAGCTAACAACTGACCATGTTAAAGTTGACATATTAAGCACAAGTGTTTCAGAGACACCACTTTTGTTATTGCCACCACCAACTATGTACCAGTTTTCCCCAACGGTTGCACCTGCATGGCCAGCTCGTGGGCTTGGAGCCAGACCCTGTTGTTTGGGTCTTGACCACTCCATTGTTTGCAAATCGAGGACATGCAAGTCATTGAAACATGTTGCATGAGACCCTCCACCAAAAATTAAAAGATAGCGATCAGCATGGCAAGCAGCAGCATGATCTGATCTTGGAGGAGGGGTGCCTATTGCATCCACATCATCCCATGTCATGGTCTCAAGATCAAGAATGTGCAAGTCATTTAAAAGACACCGTTTTGCATCTTCACCACCAAACAAGACTAGAGTTGTTCCAACTAAAGTCACAGACTGACCCCCACGAGAAACCGGTGGTTTTCCATAAGTCTTGACAATAGACCATGTACAAGTATGCGGATCAAATTCCTTCACTGTAATGTTCTCAGACGGATCTTTTGTGTGCCCAGCAACAGAGAAAAATTTGTTGCCCCAAGATATCAACGAATGTCCAGCACAAGAAGAGACTTGTGCTGATTTAGATGAATCAGTGGATCCTGCTTGAAATTTTGCATCAATCTTCGACCAAGTCAAACTCTTCAGATCCAAAGCCTGAAGGTCGCTAAGGTAACGCCCATTGTGGTTTCCCCCAAATATATACATCTTATCTTGCACCACAGTTGCGCCATGCTCGTAACGAGGTTTGGGCCGCTGCCCATTAACAGATAATGGAGTCCATTCTTCGTGAACACTGACAGCACTAAGACCTTCCAGAATAACAACTTTGTCCTGTGTCTCCACTGAACTTCCATTCTCAGATATGGTTTTAGGTTCTGGAACCGATGTTCCATTTGTTGAAGCCAGAATAACCTTGGGATCTTCCTTTGGTTTATGCATTTCAATATCTACAACAGGCTCAGGGTTGAACTCAGGAACCCTTGAGTACCATCCAGGATCTTCCTCCTCTAAGATTTTAACAAACAGCCGCATCGCCTCTGCCGATGGCATACTTCCAAGCCCATGCCAGCTTGTCCATTTGCTCTGCTCCACAGGGTTCCATGCCCTGGGTTTCGGCACATTGCAAGGCCCCACTGTTGCCTGCTGGTAGAGGCCGTAGAGGAGGAGGGCGACGTCGTTCTGGAAGCGGGAGATGGCGGACGAGGAGGTGGCCCCGCCGGCCCCGAATCCGGCGTAGGCCGCCGCGGCGTAGAAACGGTCGGGGTAGGCGAGTCCGGAGCTCGCCATGGCCGCGCGCCCGCAACGCAAGCCCTAGATCTCTCCCCGCCCACCCACTCGGATGAGATCTCGCGCCCACTGCCCGCGAGGCGGAGAGCACTAGCGTTCGCCCCTCCTCCTCCTCCTCCTCCTCGCCGCGGCGGAAATGGAAATCTGCAGCGATTGGAGACGAGAGAATTCGAGATCTGGGAGGCTTCGCTCGCTCGACCGACGCTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0242800.1 | 3 | 35105219 | G | A |
| Osa03LNT0242800.1 | 3 | 35105351 | C | A |
| Osa03LNT0242800.1 | 3 | 35105731 | G | A |
| Osa03LNT0242800.1 | 3 | 35105828 | A | G |
| Osa03LNT0242800.1 | 3 | 35106317 | C | G |
| Osa03LNT0242800.1 | 3 | 35106387 | G | A |
| Osa03LNT0242800.1 | 3 | 35106388 | A | T |
| Osa03LNT0242800.1 | 3 | 35106479 | C | T |
| Osa03LNT0242800.1 | 3 | 35106537 | A | G |
| Osa03LNT0242800.1 | 3 | 35107330 | A | C |
| Osa03LNT0242800.1 | 3 | 35107717 | A | G |
| Osa03LNT0242800.1 | 3 | 35109228 | A | G |
| Osa03LNT0242800.1 | 3 | 35109503 | C | T |
| Osa03LNT0242800.1 | 3 | 35109824 | G | C |
| Osa03LNT0242800.1 | 3 | 35109976 | T | G |
| Osa03LNT0242800.1 | 3 | 35111562 | G | A |
| Osa03LNT0242800.1 | 3 | 35112055 | C | T |
| Osa03LNT0242800.1 | 3 | 35109022 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0242800.1 | osa-miR5835 | Cleavage | 5.0 | 16.27 | 1 | 24 |
| Osa03LNT0242800.1 | osa-miR6248 | Cleavage | 3.5 | 15.282 | 1 | 21 |
| Osa03LNT0242800.1 | osa-miR167e-3p | Cleavage | 3.5 | 21.755 | 1 | 21 |
| Osa03LNT0242800.1 | osa-miR167h-3p | Cleavage | 4.5 | 21.755 | 1 | 21 |
| Osa03LNT0242800.1 | osa-miR167i-3p | Cleavage | 3.5 | 21.755 | 1 | 21 |
| Osa03LNT0242800.1 | osa-miR171i-5p | Translation | 4.5 | 16.21 | 1 | 21 |
| Osa03LNT0242800.1 | osa-miR1855 | Cleavage | 4.0 | 20.326 | 1 | 21 |
| Osa03LNT0242800.1 | osa-miR2091-5p | Translation | 5.0 | 20.962 | 1 | 21 |
| Osa03LNT0242800.1 | osa-miR5340 | Cleavage | 3.5 | 14.668 | 1 | 23 |
| Osa03LNT0242800.1 | osa-miR5486 | Cleavage | 5.0 | 17.892 | 1 | 21 |
| Osa03LNT0242800.1 | osa-miR5508 | Cleavage | 5.0 | 20.708 | 1 | 21 |
| Osa03LNT0242800.1 | osa-miR5508 | Translation | 5.0 | 16.783 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0242800.1 | 3 | spp3.1 | Morphological trait | Panicle/flower | RM130 | RG1356 |
| Osa03LNT0242800.1 | 3 | yld3.2 | Morphological trait | Seed | RM130 | RG1356 |
| Osa03LNT0242800.1 | 3 | QFll3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0242800.1 | 3 | QSn3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0242800.1 | 3 | Qbp1 | Resistance or Tolerance | Insect resistance | R1925 | R2443 |
| Osa03LNT0242800.1 | 3 | nan | Morphological trait | Panicle/flower | G249 | RG418 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)