© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0243400.1
CTGAACTGGCCCAGCCATTCCTGTACTGAGAACAGTACATCAAGAACGGCGTTTCGTCATGCCATGTTACATTTACACCTGGAACTGCAAACCAGATCTTTGCTGTACAGTAGCTGACAAGATCAGTTACATCATATGTCTCAGTGAGAGAGAAACCTACTACTAATGGTGTGGCTGGCCAATTCACACATACAGTATGTGTAGTATGTTCTTCATCAAATGGTGGTGTTAGATGAGCATCTGAGACAGGCAGCCTGTCATGGCATGGCATCTGAGAGGAAAAGCAAAACAAAAGCAACTTGGAAAAGAATCAAATCTTGATGCACCATGAAGCCCATCAGTGATACATACTCCTACCAAGTAGGGCCAAAGGCCAGCAGGGTTAGATCTACCACAATTCCTAAGCTACTACATCTGCCATCCGAATGTGCATATCATCCACTTCCTTTCAATTTGCATTCACCATTCCAACCAATCGACACAACAGCAGCAGCAAAGTTATGAGAATTGAGAGACTCTATACACACAGCTCCCCATTCACATGGCTCAAAATCAGAACAAATGGTGGTTAAGAAAAAAGCAGGAGGTTAGTCGAAGCTCGATGACCGGCTCCAGTACCCGTCAGCTGAAGTGTCCATGGTCTGTTCAGTGCTGCAGTGCGAGAGGGTGTCATCCTCCACGCCCAGCAACGGGTTCTTGCCCAGTGGATCGTCTCGTCGTCTCCTTCAAGCAGTTTCAACATCTGTGACATTTCGGGTCGGGAATGAGAAGATGTCCTTGTGCACAGCGAAGCTGCGAGAGTCATCCTCTCCATTTCATCACAGTCATAATCATTTCCCAAGAATGGATCAACCAATTGTTTAATTTCCCCACTTGATAGTAATGGCTTTGCCCATCCAACTAGGCTTTCCTGACCCTTTGAACATCCTGTTCTAATAGGTCTTCTTCCTGAAATAATCTCCAGAATTACAACTCCAAATGCATAGACATCAATCTTCTCATTGACCTTCCCGTGCGAAAAATACTCGGGAGCCAAGTATCCAAACGTTCCCGTGATGTCAGTACATGTTAGGTGGGGGGTTGAAGCTGAGACTTGCTTTGCCAACCCAAAATCACAAAGCTGTGCCTGAAAATCCTCTGAGAGGAGGATATTCGAAGACTTAACATCTCCATGAATCACAGATTGGGTGACACTTCCATGATGTAGATATTCAAGTGCCTTTGCTATGCCAATTGCTATTTTGTTTCTCTTCTCCCAGCTAAGGCTATCCTTGCTGTCATGCTTGCCATGAAGTGCTTTGTCTAAGCTTCCCTGGAGCATGTAATCATATACCAACACAAGACTGTAGTTATCAGAACTGAATCCTCTTAGTGAAACAATATTGTCATGTTGCAAGCTGGTTGCAATCTCCACCTCTGTAACAAACTCTTGTATTGCATCAACTGAAGGTTTCAGAATCTTTACAGCTGATAATGTGCCATCAAATAGTTGTGCCTTGTAAACTTGGCTTGTTCCTCCCTTTCCAATTAACATATCTGGTGAGAAGTTTGACGTAGCAAGTTTCAGCTCTTCATAGGTAAACAGCCTACACGTTGAAGAGTACTTCTCTTGAAGCGATTCCACTTCATTTGGAGGCCATGATATATCATATAAAGAGAACGAAAACATAGATTCTGTGTCAACAGCTGAAGTGGATTCACATTCGGAATCACAATTCAACCTTGGACTTGCATCTGATTTAAATGATTTGTTGTCTGCAACTGAAGTATAACGGCTTGGAAGCCTCATTGCCCACTGAACCATGGAAATTTTGGCCCATTCAAAAGATGAGCTTCTTTGATGATTGAAGATCCTCCTTCGAAGTCGACAGCGGTCGGGCCTTCCCTCTATCATCCTTCTTAGAGACATTGGAGAGCTGGAGGGTGTATCGACATCACGTGCAGCGTTCTTTGGTGAATCCTCAGCTTCTGTAGATACCATGGACGAAGTCTGTTCAGTTGTAGTCGTGCAAACTGAGACATCCTTTTGAATATCACTGGAGAAACTACTGCTGCGCCTAATCAAACCTTTTGCACCGAAGGAACGCTTTGATCCCCCAGAACTTCTACCTGAATGGCCAGTCCTTGGCAATCGGCAGTACAGTTCACCATCTCCTTCAGCAGACAGACTGGCAGAATCATCGTGTTTCCGACTCGCAGTTGAACGGCTAGAATCACCGCTACTCCTGCCTGAATGATCATTTCTTGGGGGCAAAATACAGTACAGCTCCCCATTCCCTTCAGTCGGTGGCTCGGTCGAATCATTGGATTGCCGACTGGACGTGCTTGCAGCTGAATGGCCATTCCTCTCTGGTAACACACAGTACAAAACACTAGCACCCTCACCCGGAAGCTCAGAAATCTCATCTTTCTGGTCGGCAGTCGACTCTTCACCCTTGTCAGATGGATCAACATCACCCTGAACCTGATCCGGAGACAACTCAGCAGGATCCACACCGGAAGGCTGCTGTTCACCGGAGACGGCATTCACCGGCTCGGTCTCCTTTGTGCCAACATCGTGCTCTTCTTCTTCCTCGCCCGCACTACCACCACCATCTCTGGGTGGTTCATGTAAAGGTAAAGGTTCCTCTTTACACTGACGGGCTAGGAACGGCACCTCGCAATACAACTCATTATCACCACATCCAGGAATCTCCGCGGAGACCTTGCCTGAGTGGACATTGGATTCTCTCCTGAACACGATCTTGCCGCTGTCCACGGCGAGCACCGCGCACTTGGCCGGCAGCTTCTTGGAGCAGTATTTGGCGACGGAGTGCAGGGACGAAATCCCGCGCTTCTTCTTGGCGATGCCGACGATAACCTTGGATGCCCCAAACAGGTTGGCCTCACGAACTAGCGCCTTGCGGACCGAGGAGTCCTTGCAAATCTTGAGCTTTAGATTGATCTGCTTGAGATTGCAGAAGCCCTCGTAGACGGCGAGCATGGTGTCGAAGTCGACGGCGGTGGTGGCGGCGGCCACGGGCGCGGAGGCGAGCACGACGTGGACGGCGACGATGCGGTCGCCGGGGGCGGCGACATTGATGAACGTCCACGTGAGCAGCGTCCGGCTCGCGGCGTCCGCCCGCACGCCCACCACCAGCGTCCTCCCCTCCCGCTCCCCCTCGCCGCCGCCGCCGCCAACAGCGACGTCGGCGACTCCCTCCCTCTCCTCCCCGGAGCACCCTTCCTCCGCCACTCCTCCGCCAGCGCCGTCCATGGCGCCCTCCTCCATCGTCGTCGTCCCTCCTCCTTGCTGATGATGCTTCTTGGATACTACCTTCATCTCTCAACGGCAGCAAACACAGCGCGTCACGACTCCCAAGGCAAGCCCACCATGGCCGCGTCGTTTCTTGCCTCGAGCGCCGTTGGCTGCCTCCTCCTGGCAACCGTCGCGTCCTCTCTCTCTCTTCTTGGGGCGGTGGTGGTTTCTTTCTCTCTCTAGTTTGTCTCTCCCACCATTATAGTAGCCGCGGCTGCTGTGGCTGGCGATGGCAACCGCTCTTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0243400.1 | 3 | 35312849 | T | A |
| Osa03LNT0243400.1 | 3 | 35312945 | A | G |
| Osa03LNT0243400.1 | 3 | 35313293 | C | T |
| Osa03LNT0243400.1 | 3 | 35313569 | A | G |
| Osa03LNT0243400.1 | 3 | 35314920 | A | G |
| Osa03LNT0243400.1 | 3 | 35315295 | A | T |
| Osa03LNT0243400.1 | 3 | 35315380 | A | C |
| Osa03LNT0243400.1 | 3 | 35315718 | A | T |
| Osa03LNT0243400.1 | 3 | 35314709 | C | T |
| Osa03LNT0243400.1 | 3 | 35317152 | A | C |
| Osa03LNT0243400.1 | 3 | 35312979 | T | C |
| Osa03LNT0243400.1 | 3 | 35314343 | A | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0243400.1 | osa-miR5541 | Translation | 4.5 | 24.414 | 1 | 21 |
| Osa03LNT0243400.1 | osa-miR5815 | Translation | 5.0 | 16.286 | 1 | 24 |
| Osa03LNT0243400.1 | osa-miR5832 | Translation | 5.0 | 8.795 | 1 | 21 |
| Osa03LNT0243400.1 | osa-miR444a-3p.1 | Cleavage | 4.5 | 15.761 | 1 | 21 |
| Osa03LNT0243400.1 | osa-miR444d.1 | Cleavage | 4.5 | 15.761 | 1 | 21 |
| Osa03LNT0243400.1 | osa-miR1435 | Cleavage | 4.0 | 15.827 | 1 | 20 |
| Osa03LNT0243400.1 | osa-miR1861b | Cleavage | 5.0 | 24.116 | 1 | 22 |
| Osa03LNT0243400.1 | osa-miR1861f | Cleavage | 5.0 | 24.116 | 1 | 22 |
| Osa03LNT0243400.1 | osa-miR1861i | Cleavage | 5.0 | 24.116 | 1 | 22 |
| Osa03LNT0243400.1 | osa-miR1861l | Cleavage | 5.0 | 24.116 | 1 | 22 |
| Osa03LNT0243400.1 | osa-miR2094-5p | Translation | 4.0 | 19.303 | 1 | 21 |
| Osa03LNT0243400.1 | osa-miR2926 | Cleavage | 4.5 | 22.003 | 1 | 20 |
| Osa03LNT0243400.1 | osa-miR5150-5p | Translation | 4.5 | 17.635 | 1 | 24 |
| Osa03LNT0243400.1 | osa-miR5505 | Cleavage | 3.5 | 11.347 | 1 | 22 |
| Osa03LNT0243400.1 | osa-miR5505 | Translation | 5.0 | 18.241 | 1 | 22 |
| Osa03LNT0243400.1 | osa-miR5519 | Cleavage | 4.5 | 11.196 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0243400.1 | 3 | spp3.1 | Morphological trait | Panicle/flower | RM130 | RG1356 |
| Osa03LNT0243400.1 | 3 | yld3.2 | Morphological trait | Seed | RM130 | RG1356 |
| Osa03LNT0243400.1 | 3 | QFll3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0243400.1 | 3 | QSn3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0243400.1 | 3 | Qbp1 | Resistance or Tolerance | Insect resistance | R1925 | R2443 |
| Osa03LNT0243400.1 | 3 | nan | Morphological trait | Panicle/flower | G249 | RG418 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)