© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0243500.1
GACAGAAAAAAAAATGACAGATATATCAAATGATGATGGAGCAATATATACATTACTACTCTGCAAGTAATCTACGAAACTAGGATTCAAGCAACAAATATTGAGATCCCTGTGTTGCTAAGCACTAGAATTATGGTTCTAAGTTTCAACTAAACTAGAAATAAGCAGCAAACCAAAAAAAAAAAAATACAGTTCTTCAGCCTTTGGAACTGTACTGCTTTCATCGCCATCTGGAGAATCCTGTCAGCAAAATTATTTTCGATGCAGAATATGGCCTTCCAGAGCCCAAAGGTCATAGCACCAGAATATAAATTTTCAAGAGGCCCATGATATTGATAGAATCATGAGGTCGTCAGTAATGTTCGCATGGTAATCACGTTAGTACCAATCAAAAACATCACCAAGATCATCATCATCATCATCATTTGTAGAAACGTGCTCCTTCTCTTCGACCTCAGATCTGTGCATGTCCAGCTCTTTATCTGACCAATCTAAACCATTTTCTTCCTCCTCATTAATTAATCCACCCGGTATATTCTTATTTCCAGGGTCCTCTTCATTTGATGTACCCTCCTGTTCATGTGTATTGTTGATATCTGGCTGGACATCTTCGATGTTGAGCTTTTTGATTACTTCTTTAAAATACAAATTATCTCTCGAGCGATGCATTATGGCATCATGAACTTGCATTGGATGTTTTTTCTCCTCAGCTTTAAATTTTTGTCGCACCTGATTACGGCTCTTATCAGGGAAGAGATGCTGTATCATTGCAAAATCGCTACCAAATTGTTGAAGACCCTCGTAAAACTTGTCCGTTTCAGATTTGGACCATTTGGCTCGTGTTTGTCTGTTCATGTATGAATGGTAATTAAGTTTGGTTGTATTTTCGACCACATGATTCTCAGTCCTGTCGTTGTCCCAGTTGTCTTGTTCGTTATACTCATCATCCATATCTCCAAATTGGGAGGTGCTATGATTAGAGGACGATGGTCCTGATGGAATTTCTTTGCCCTTAATACGTTCTTTCGCCTCCTGTAACAGTCTAAGATGTGTCACACTTAGCTTCATGCGATCTATCTCGTGATCAGGTGTTTCTAGTAAAGTCTTGACTTCTTCCATTCTCTTTCGACGAATTCGGTGTGTAAGCTTCTTCTCAGGTTGTTCCACCGATGAATCTTTTGATGTTTTCTTCTGACCCCCTGAAGATGCTTTACTTTTATTTTTCTGAAGCTTCTGCTTCTGTGATTCCTCTATAGTGGAATCCCCCGAGGTGCGCTTGGTACCTCTCGAAGGTTCTTTGTTAATATTTTTCTCCCTTGATTTTCTCCTGCCCTTCTGCTTGCCTCTAGCGGTGTACTCATCACCACTATCATTATCTTGTTCGTCAGATGGAGGTTCACCAAAGTCTTCATCCATGATATCATCAGCGGTATGCTCAGGTATCCCATCTTTTTGTAATTTTCTCCTGTTTCGTAATTTCATTGATGTTCCTGTTTCTCTGGCATCCCTTTCTGGCTCTTGTTCAATAACATGATCATATGGCTCCCCCTCATGGTATTGATTCTCTGGGTCATTACATTCTTGATCATCTGGATGATGTTCGCCACTAATACAGATCTTTTCAGATGCTTGCTGGGGCAAGTTGCTTAAACTTTCACCAGTTGCTATATCTTTACAGAAATGGCTAGAGTTGCTTGTCTCAAAATTGGTGTCTGTAGGAGCATGCGCATGAGAAACATTTGGTGGAACAAAAGATACTGATTTTCCTTTGCCTTTTTTCCTTCGAACATAAGGTTGAAATTTAACAGTAGTTCCCGCTGAGAGCTCTTCAATGATCAACGGACTACCATCAGGATGTGGATTTACCATTTCAGCATGCGAGTCTAAATCAACAGTATCATCCAAATCCTGTGGTGGCCCAGTGCCTGAAGTTGTAATAGCCTCTTCATCTATATATTTTTGGCATGAATCATCACTGAGGCCTTCTCTATGGCTATCTTCTTCCGTATCTTGGGAAACCACATCTACAGAGGAAACCCCAAACTCTGGAGTAGCTACACAAGCAGCATCAATAGTCTCAGCAACCCCAGGTGAAGCTCCACCAGCCTTTGGTCGCAGTCTAGGTTGGAATTTTGCAGCCATTTCCTCTTGAGCTGGTTCTTCCATAATACTATCAGAGTTAGCAACGTCATCGATTGTACTGTTATGAGTTCCCAGGTGTGCTTGAGAATATGAGATCTGTACACTTTCTTGATGTCTAGTAGGAGAGTGCAGCTGCTTGTCATTGCATCCTGCCTGATCTTTACCATCTTCTTTGTTTTGGGAGAGCACATCTACAGTGGAGACTCCTGCCTTTTGGTTAGTCCTCTGAGATTTCGATGCGGCCTTGCTGGTTTTCACCCGAAACTTCGGCTGGAATTTTGCAACTCTTTCTTCCTCAACATGAGTATCATCACACAATCCTTCAAAGTCAGCCAAATCATCAATTGTCCTGGCACTGCAACAGGTCGGTGGTGCTTGGGTATCTGAAACCACCATGTTTTCTTTGTGTGTAGCCACATGAGATACATCATCATTATTCTCTTCATTTTGGGAAACTTTATGTGCAGAAGAAGCGAAAACTGTTGAAGAATCCAATGCCACATCAGGATTATTCACAAGCCCCAGGGATACTGTCACCACATCTTCAGAAGGTGTGTCAAGTATACCGCCAGAAGCACAAGCATTACCATCTGTCTCACTACCATGGCATCCTAATGATGCTGCTTTTTTATCAACAGACTGTTCTTGTGAGGTGCTATCTTTATTTAATGTTTCCACATTTTCATCTGTTGATTCCACAGTAGGATGAGGTGCCAGGGATCTGGATGGCAAAGATGTCTTACGGGGCTTGGCCCGTGCCTTCGGACGGAACTTTGCAGCTGCCTGCCCTTCTGTGGCATCAGTGATGTTGCCAAAGTCAGCCTCATCATCAATCATTGCTATATGACCACTGTTATGAACTCCAAGAAACAGTTTTTAAGTGCCAATGTCACAAGAAGTATATTATACTGGAGAGGTAGATGGCATGATACTGAACTTGAACAACCTTAAGAGAGATTGAATTGAAGAAAATTAAGAGATGATCAAAGTGTAGCCTTGTTCGCTGGTAGGGTCGAGGAGTCCTGGGATCGGTGGCGGCGCGAGGGACTCGAAGCCGGTTCACCTTCGAGGTCGGGACGGCGATGGAGCGACGGCGCCGACGGGGCTGCGGGCAGCGGCGGCGTGGAGCGTCGGCCCGACCTCGCCTTCTCCAGCCGTCGCGCGGAGTCACGCCGTCGATGGAGCGCAGGCCGCTGCTGCGGCGTAGAGCGACGGCGTTGGAGGGGATGCGGCGGCGGTTGAGGCGGGGGAGCGACCGAGAGGGTATGCGGCGGCGTGAGGCGGATAGGGGGATCGGGGGGTTTGAGGGGGAGAGCGCGAGGAAAAGAAAAGAAAGGCTATCGAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0243500.1 | 3 | 35335285 | G | A |
| Osa03LNT0243500.1 | 3 | 35336220 | T | A |
| Osa03LNT0243500.1 | 3 | 35336548 | A | G |
| Osa03LNT0243500.1 | 3 | 35336649 | G | C |
| Osa03LNT0243500.1 | 3 | 35336833 | T | G |
| Osa03LNT0243500.1 | 3 | 35337917 | A | C |
| Osa03LNT0243500.1 | 3 | 35338384 | T | C |
| Osa03LNT0243500.1 | 3 | 35338463 | G | C |
| Osa03LNT0243500.1 | 3 | 35338510 | T | A |
| Osa03LNT0243500.1 | 3 | 35338795 | A | C |
| Osa03LNT0243500.1 | 3 | 35339248 | T | G |
| Osa03LNT0243500.1 | 3 | 35339864 | C | T |
| Osa03LNT0243500.1 | 3 | 35340181 | A | T |
| Osa03LNT0243500.1 | 3 | 35340813 | T | G |
| Osa03LNT0243500.1 | 3 | 35341105 | T | C |
| Osa03LNT0243500.1 | 3 | 35341322 | T | C |
| Osa03LNT0243500.1 | 3 | 35341394 | T | C |
| Osa03LNT0243500.1 | 3 | 35341416 | A | C |
| Osa03LNT0243500.1 | 3 | 35341490 | T | C |
| Osa03LNT0243500.1 | 3 | 35342770 | A | G |
| Osa03LNT0243500.1 | 3 | 35342811 | T | A |
| Osa03LNT0243500.1 | 3 | 35342862 | A | G |
| Osa03LNT0243500.1 | 3 | 35343296 | C | A |
| Osa03LNT0243500.1 | 3 | 35343347 | A | G |
| Osa03LNT0243500.1 | 3 | 35343627 | A | T |
| Osa03LNT0243500.1 | 3 | 35343784 | T | G |
| Osa03LNT0243500.1 | 3 | 35343786 | C | A |
| Osa03LNT0243500.1 | 3 | 35343806 | A | G |
| Osa03LNT0243500.1 | 3 | 35343872 | T | C |
| Osa03LNT0243500.1 | 3 | 35343919 | A | G |
| Osa03LNT0243500.1 | 3 | 35343968 | A | C |
| Osa03LNT0243500.1 | 3 | 35344016 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0243500.1 | osa-miR812p | Translation | 5.0 | 12.956 | 1 | 24 |
| Osa03LNT0243500.1 | osa-miR5833 | Cleavage | 4.5 | 9.657 | 1 | 21 |
| Osa03LNT0243500.1 | osa-miR5834 | Translation | 4.0 | 24.18 | 1 | 21 |
| Osa03LNT0243500.1 | osa-miR5834 | Cleavage | 4.5 | 17.863 | 1 | 21 |
| Osa03LNT0243500.1 | osa-miR2873c | Translation | 4.0 | 14.006 | 1 | 21 |
| Osa03LNT0243500.1 | osa-miR390-5p | Cleavage | 4.5 | 13.456 | 1 | 21 |
| Osa03LNT0243500.1 | osa-miR530-3p | Cleavage | 5.0 | 17.25 | 1 | 21 |
| Osa03LNT0243500.1 | osa-miR820a | Translation | 4.0 | 23.138 | 1 | 21 |
| Osa03LNT0243500.1 | osa-miR820b | Translation | 4.0 | 23.138 | 1 | 21 |
| Osa03LNT0243500.1 | osa-miR820c | Translation | 4.0 | 23.138 | 1 | 21 |
| Osa03LNT0243500.1 | osa-miR444d.3 | Cleavage | 5.0 | 15.063 | 1 | 21 |
| Osa03LNT0243500.1 | osa-miR1440a | Cleavage | 5.0 | 24.06 | 1 | 20 |
| Osa03LNT0243500.1 | osa-miR1854-3p | Cleavage | 5.0 | 15.163 | 1 | 22 |
| Osa03LNT0243500.1 | osa-miR1866-3p | Cleavage | 4.0 | 18.559 | 1 | 22 |
| Osa03LNT0243500.1 | osa-miR1320-5p | Translation | 3.5 | 11.718 | 1 | 21 |
| Osa03LNT0243500.1 | osa-miR2923 | Cleavage | 5.0 | 11.452 | 1 | 22 |
| Osa03LNT0243500.1 | osa-miR2928 | Translation | 4.5 | 12.099 | 1 | 20 |
| Osa03LNT0243500.1 | osa-miR2932 | Translation | 5.0 | 15.647 | 1 | 19 |
| Osa03LNT0243500.1 | osa-miR5522 | Translation | 5.0 | 14.62 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0243500.1 | 3 | QFll3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0243500.1 | 3 | QSn3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0243500.1 | 3 | yld3.2 | Morphological trait | Seed | RM130 | RG1356 |
| Osa03LNT0243500.1 | 3 | spp3.1 | Morphological trait | Panicle/flower | RM130 | RG1356 |
| Osa03LNT0243500.1 | 3 | Qbp1 | Resistance or Tolerance | Insect resistance | R1925 | R2443 |
| Osa03LNT0243500.1 | 3 | nan | Morphological trait | Panicle/flower | G249 | RG418 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)