© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0244000.1
GGCTGGGAAAAACTAGTTTTGATTAACACAAAATCGTCTTTGGTACACCATAAGTATGATATAAAGTAGTATATGCTGGCCAACCATAGTAGGTCAGAAACAAATGCATACAGCACAGTCTGACGGCATATATCCATGCTCCAGAGTTCTTCAGTAAAAGCTCAACAAACACAATATCTCGGAGGACCACAAGTATCATGTAGAAAAACCAGAATACTCCAAAATCAGCCATCATGGAGCACCAGATTCAGTATCTATCGTGGCGCCTGCGCTCCCTGGATCGAGAACGTTCCCTTCTCCTTGAATCATGGCCACGCGAACGGTCATAATCTCTATCCCGATCGCGATCATGGCGGCGGTCCCTATCGTGGCGCCTATCCCGATCACGATCATGGTCTCTTCTGCTTTCTCGAGGTTCAACTCTGTCCTTTCTTTCTGAATCTCTATCCCTGGATGCCTGACCATTGCGGTCCTTGCTGTATTCTCTTGATCGCCTGTCATCTTCAGGTGCCTTCCTTCTTTTACTTCTCTCCTCCTGGAAGGCGGCATAGAATATTTTATAATGATAAAATCATGATATCAAGGCTCCAATTTGCATAGGAGGGAAACAGATAAAGGAAAAAAAGTAACATATATATAAAAAAAAGGTGCAAGAGATACATTACGGTTAAATTGCTCCAGCAATTAATTTACAAACTTAGTACTTACAGTAAAAGATGGCAAAAGGAGTGCACTTTCAGAGTAACTTAACCGGTACTATTTATCACCATCTCTACAAAATATGGATCACCCAGCAGAAAACAATCTCCAGCTTCTGATCAACATAATACTAAGCAGATTATATGAGCAGCTTGACACAATTAAGTAAACATGATTGTCCATACCATGTTTTGCACACTCCTACGCTTACATTTGCAACTGTACATGACAGCTGTTGTTCCCATGGATAGGAGGGATGATTGGCACATGAGATTCCAATTATGCAACATTGACGAGATTCCAATTATGCAACATTGACTAGTTCCTGTAACGACTAATGTAGTAGCCACTGTGCCCTCCAATGTGAGAAATGAAATAATATATAGAGAAGGTGAGAACCTGAAGGTTCTTCCTTGAGATAAGAAAACTCACAGATGCCAAAAGGCCCAAAACAGAGTAACTCTTTAAAGCAGTAAAGGGTACATAACATTCAGCACCTGTAGTTCTTTCAGTTTCTCACGAATCAGCATGTATCCCAAATGTAGCTTTCCTCCAAAATGGTCAGCAAGGCGTCGATCATTGTCGTAGACACTTAGAAATGCTCCACATATGTCACAGAGACGCAACTTCTGATCAGTAATTCGAACATCAGCAGCAGTATATTTAGTAGGATCCGAAGTTGGTTCCCTCCGTGCTGCCAACTTTTTCAAAGCCTCTGCTTCTTCCATAACTTTCTGTGCTTCATCTACCATCCCTTGTTCACCAAGCTCTTCAGCTTTCTTTATCTTTTCGTTGATCATTTCTTGAGTGCGAGCATCAGGGGGAGCAGGTGCTGGTACTGATGCCATTTGAGGTGTTGGAGTAGGCTGAGGTAATGAAGCTCTGTCCTTGTTAAAGGCATCAAGCAGAAGGGTAGCCTGCATGTCAGCCCTTTTAGATCTTAATTCTTCCACCACTTCCATGGTCTTGATTTTATCATCAGTTTTCCCTTCAAAATCATAGGTATCAACTTCTTTCATTTTTTCCTTGATCTCCTTTGACAACTGCAACACCTCATCTGTCTGAGTAACCTCAGAAACAGATATTGCAATAGCAGCCTTGGCATCCTCATCAGCAAGACGCTTCAGCGCCCTCTGAATTTTCCTCTCGCACTCCACGATGAGCCTGTCTATCATTTCCTCGAGTTCCCTATCATAATTTTCTGTTCCTTTTGCCTTTACTTCTTCATAATCCTTCCGTAGCTGCAGCGAATGAACTTTGGGGCAAGGCCCGAGATCCATTTTCGTGAGCTGGAAGAGGTCGTGGGGGCAGAGGCCGGCGAGGAAGAGGCGGCAGACGTCGCGGTCGTAGTACTTGCGGCTGACCTCCCGCACGTCGCCGTTGCGGTTTGCCCCCATGAGCACGTCGAGTTGCTTCCTCATCGCATCCATGGCGCCAACCTACCTCCCCTCGACGCCCTCGGGGAGGAAATCGCGGGCGAGGTTGGGGTTTAGGGGCTCGCCTAGGGCTAGGGTTTCTGCCCAAATGAGCGAGCGGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0244000.1 | 3 | 35446449 | C | A |
| Osa03LNT0244000.1 | 3 | 35446716 | G | A |
| Osa03LNT0244000.1 | 3 | 35446741 | A | G |
| Osa03LNT0244000.1 | 3 | 35447035 | T | C |
| Osa03LNT0244000.1 | 3 | 35447327 | A | T |
| Osa03LNT0244000.1 | 3 | 35448501 | G | A |
| Osa03LNT0244000.1 | 3 | 35448576 | C | T |
| Osa03LNT0244000.1 | 3 | 35448727 | T | G |
| Osa03LNT0244000.1 | 3 | 35448989 | A | C |
| Osa03LNT0244000.1 | 3 | 35449717 | A | G |
| Osa03LNT0244000.1 | 3 | 35450479 | A | G |
| Osa03LNT0244000.1 | 3 | 35450737 | T | G |
| Osa03LNT0244000.1 | 3 | 35451397 | A | G |
| Osa03LNT0244000.1 | 3 | 35452027 | G | C |
| Osa03LNT0244000.1 | 3 | 35452111 | T | A |
| Osa03LNT0244000.1 | 3 | 35452302 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0244000.1 | osa-miR1861o | Cleavage | 4.5 | 10.88 | 1 | 22 |
| Osa03LNT0244000.1 | osa-miR1861o | Cleavage | 4.5 | 17.783 | 1 | 22 |
| Osa03LNT0244000.1 | osa-miR164e | Translation | 4.5 | 15.789 | 1 | 21 |
| Osa03LNT0244000.1 | osa-miR172a | Translation | 4.5 | 9.782 | 1 | 21 |
| Osa03LNT0244000.1 | osa-miR172b | Translation | 3.5 | 9.782 | 1 | 21 |
| Osa03LNT0244000.1 | osa-miR172c | Translation | 4.5 | 9.782 | 1 | 21 |
| Osa03LNT0244000.1 | osa-miR172d-3p | Translation | 4.5 | 9.782 | 1 | 21 |
| Osa03LNT0244000.1 | osa-miR1852 | Cleavage | 4.5 | 16.012 | 1 | 21 |
| Osa03LNT0244000.1 | osa-miR1846a-5p | Translation | 4.5 | 18.175 | 1 | 21 |
| Osa03LNT0244000.1 | osa-miR1846b-5p | Translation | 4.5 | 18.175 | 1 | 21 |
| Osa03LNT0244000.1 | osa-miR1861a | Cleavage | 4.5 | 10.88 | 1 | 22 |
| Osa03LNT0244000.1 | osa-miR1861a | Cleavage | 4.5 | 17.783 | 1 | 22 |
| Osa03LNT0244000.1 | osa-miR1846c-5p | Translation | 4.5 | 18.175 | 1 | 21 |
| Osa03LNT0244000.1 | osa-miR2275a | Translation | 4.5 | 23.181 | 1 | 22 |
| Osa03LNT0244000.1 | osa-miR2275b | Translation | 4.5 | 23.181 | 1 | 22 |
| Osa03LNT0244000.1 | osa-miR2922 | Cleavage | 4.5 | 14.334 | 1 | 20 |
| Osa03LNT0244000.1 | osa-miR5157a-3p | Translation | 5.0 | 14.339 | 1 | 24 |
| Osa03LNT0244000.1 | osa-miR5157b-3p | Translation | 5.0 | 14.339 | 1 | 24 |
| Osa03LNT0244000.1 | osa-miR5503 | Translation | 4.5 | 17.697 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0244000.1 | 3 | Qbp1 | Resistance or Tolerance | Insect resistance | R1925 | R2443 |
| Osa03LNT0244000.1 | 3 | nan | Morphological trait | Panicle/flower | G249 | RG418 |
| Osa03LNT0244000.1 | 3 | spp3.1 | Morphological trait | Panicle/flower | RM130 | RG1356 |
| Osa03LNT0244000.1 | 3 | yld3.2 | Morphological trait | Seed | RM130 | RG1356 |
| Osa03LNT0244000.1 | 3 | QFll3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0244000.1 | 3 | QSn3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)