© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0022000.1
GTTATAGAAAATCCTGGTCGTCATTCTCATTGTTTTTTTGTTCCCCAAACACTGCAACCAAGCAATAAAACAATAGGGGCTACTACACACATGCCCTCATATGAACACGATGGAACCAGAAACAAATAAATCCCAGAACCGCCATATCGGTGCCAGGAAAAGTTACATCGGATTGTACTAGTCAAACCTGCAGAGAAGCACAACCCATATATTCATCATGATCAGTCCCTCTTTGAGCCGCTACCATTCTGGCCGGTGAGGATCCTGGAGATCTGCAGCCCCCGGCTGAAGGCCTGGTTGAAGAGCAGCCGAGTCTGAAACTCGGAGACGAAGGGGAACCACGACAGGACGGCGATGGGGAAGAAGATGAGGATCCCCATGGTGTACTCGTACATCCTCGCCATCTCCTGGATGGAGTCCCATGGCCCGATCTTGCGGAGCACATCCCGGCTCCTCAGCCTAAACCTGGCGCAGCAACGCCCCTTGCATGCGGTGCCCCCGGTGCAACATGAACAGAACAGGGCGCAGAGCGGCTCCGTCACCAATCTCCGGAACAATGGTCCACAGAGCTGTGCAATCTGAAGAATAAACCAGCCAGTAGGGATGAATGCCAAAATACTGGCACCAACATCAGAGACAGTCAGATTGAAAACAACAAATAATATGACCACCAAGCTGATGAGGACAATAAAGACAATGCCCTTGAGGATACGGAATACAAGTTGAAAATTGGTAATAAACTTCTCTCTCCCCATTGAGACGACCTTAAGTGATACAAGAACTATAGCTATAACCAGCCATGATAGTGCATACACCATGAAGCTTCTGTTCCCATGCACTATGTGTAAATGATAAACAATACCATATTGGTATATCAAGAAGCGAAGGGAGAGGACGAACTCCAACAGCAGGCTACGTATTGTACCATTCCTCAGGTGGTCATGTTCACTTATCCACCAAGCCTCCCAACTTTGCTCTGGTGCCAGGCCAATACCTCCTCTATTGCTCATCCAATGCCACCAGTCAGTCCAGTCATCAACAGTCTTGTGCCACTCAAAGCATGATGGATTGAAGACAAAAGGTGCAAACAGCCAACAGAAAACAAGGAACCATATTGAAATTGTGACATATAGATACAAACTTGAGCTCCTGTACGAAATGCCATAAGCTAGATAGACAACCAAAAGAATGAGTAGCTCCAGTGCTTTCACAAAGTGGCTCCGGGAATACATCCGGTAATTCTCAGCAAACTTTGCATGGCGCACAACAAACCCCCGGCCTGTACCTCTATATTTTGCACCACCATGAAGTATTGTTCTTCCATAGTAGTGAGTCTTCGTTCCAAGATGGAAAGTGAAGAAAACAGAAGCTAATTGAAGTTGCATTATTACAAACTCTCCCAAGGCTCTGCCAAATCCTTTCTCCAAGCCAACCTCTATCATCATAGGGAGGACGAGCAACATTCCAAGTTGGAAAATAGATTGAGTTGCAAGTGCATTTTCAAAGGGCTTGATGTTCTTAATTTGTGGATCCTGGAGAATTGACTTCTCTAGGCCACTCAAAACAAGATATAACCTCCCGTATAAAAATACATACACTGTAAGAACAGCCACCATACTATTGAAGTAGAAACCAACTGTAGTGAAGTATAGAGACAACATCCTGTAGAAATCAAATCTGTGCCCTAGTCGATAAATATCTCGACAGAGTGTTTGTTCACCATTTCCGTTTGCCACCTTGGCCTCAAAGTTGGATATTTGATTCATTCCAACATCACGTCCTTTACCCAGCTGTATATATTCATGATGAGTAACATTTCCTTGCCGCAGGGTTGAATTGAATCCTGCAAAGATATCCTCGCTAAGGTTGATAACCTTTGATGCCTTGCTTATGCCACCCCTTGTGAGGTGAAAGATTCTATCGAAAACATCAGGGTGACCATAATGGAATCGTACCTTGAGAGTGTTCGCAAGAACACGTTGTCCAATGGTAACGAAACTAGTCTCTTGGTTTGACATAAACCACGCAAGGGATGAAACACTCCCAGTAAAGATATGTTCGCGAACACCCAATATTGTTGGTTCAGACTTTCCGTGTTTAATAAGGAACTCTTCCAGTAGATTTCTCATTTTAAATGCTTCCTCAAGGTAATTATCCTGGTTCATGTCAATTGCTTGAAGCGCTTCTCCTCTAGTGAAGATTATAGCGTGATTTTGATTATTAGGCTTTCCCTCGCCAATATCTGTTGGTTTACCTGGGAGCCTTATCCGGTAAATTTCCTCATCATTGCCTTTCACAAGAACTGAGTAATATTGTTTCTCCATTTTACCATTTGGTAATGGCACTTCTTTCTCATCAATGTAAGCAATACGCAATGCTGGATACGTTAACATGAGATTTAAGATGTTTTCATAAAGACCTTTTTCACGGGAATCCTTTGATGCCTTATGCATGCCATAGAGTTGGCAGGAAACAACATAAGTGAATTTTATATCAGCAATGGCCTTGGACCTTGCAGATTCCTCTCCGTCTAAATCAGCTTGAGCATTTGTCATATCCTCATAGCATTGTAGTTCAAGAGCTCGTCTGTAGTACATCATTCCTCTCACAGTTCTGGCAAGTGTTTGACCACGGTAAGATGCCCAGATACGGACATCATCCATGTACCCTTTTACTGCCTCTTCATTTTCTGGGTCAACTCCAATGCGTTCTAGAAAGTTCTTCCATTCATCTGGATAAATCTTTTGTAGATAGAACAAAATTGAAATGCCATCTTCATTCTTCTTATTCAGTTCATGAGAAGAATAGAGCACTTCCTCATTATAATATGGAGTCAAAACACTAAATGAAATCATATCATGAACTTGAGGTGCTTTTGGCATTTTCATGAACAGTGAGTTTGCAAAGAAGGTGATCCTACGCCGAGCATCCAAATTTGTTGGTACATCCATTGCGGAATCCTTCATAGTCAACAATAAGTGCAACCGGACAAACTTCTCCTTCCAAAACGATTCCTTTATCATATCCATGTCTAAATGTGTGAACCTCTGCTTTCTCTCATTCTCATCTTTCAAAATACCCTGTCCATCTTTCATGAAATCCCGTGTAGTAATTTCCATAAAATCTTGCAGAGCATTAATGATTTTTCTCTCAGCAGTACCATCAGTAGATTCATTGCTCAGTAGATGCAATAATTTTGCCAGCGTGTTGCTGACTTTGCCAATCTCTGCCATATGAAAATCTTCCAAAAGTGTATTATTTTCCACACTATCAAGCACTGTTTTATCAATGGCATCGACGATTTTCTGATCATTATTGTCTAGCAGAAGATTCTTAAGAATAAGAACCAAGGACTCGTAGCATTCTATGACAGCATTGAATCTAGCTTGGTCTAGTCTGATTTTTTCAATCAACTCATGGTAATCCCCTTCTTTAGAAGTCATGGCCATGTGAAGAGCTGTGGGTACCTTACTGGCAACAAGGAAAGGAGGCCATGGAGTAACAGAAAAACTACTTGAAAATGACGGAGCCATCAGTATGTCCCTTTCTCTATCACTTATGAAGTCTTCCTCTCGTAAGGAATTGATGAATGAATTCCAAACACAAAAAAATCTCCCCTCACCACATGCTTGCTCTCTATGCGCTGTTGCATGGCTTTTATTGAAAGCTTCTGGCATTGATTTGAATCTGGCTCTTAACATGCCAAGGGTACGTATCTCACCAACATGACTAAGGGCACCTGAAACACCCCCAAATGCAGTTGAAAAAATAGCATACCATATTTGTATATCCATGAAGTACACCATGACGATTGGGGCCCATATAGTAATGACGACACCAAGGTTGTGTGGCAGGAAAGGGAAGATTTCATGCCACTCATAGTTCCCAACTCCTTGGTTAAGAAGGAACTTTGTCGGACCAATAATTGGGGATATCTCAACATAAAAACTAAATGCAAGCTTGCAGGTGAGCAAAACGACCCAAAAGAAGACATACTTAATAATGGACAATATATCTTCATGCATACCACGTGCAACATATAATCTTGGCTGAATCCACCACATAATAAGACCAATTACACGCCAGTTTGAGCGTTCCATGATATTCTGAAGTTGTGGCAACAAGAAAAGAAAGGCAGCCAAAATGTCCGGGACTATATATATGATGATTGCAACATTATATACTGACGGGTTATGCCAATTTCCTACCCAACTATTCAGGAGTTTTCCAGCACCAGATGGGTATCTGATGGAACTAGAATATGCTAATGGAAGAATTATTATCCAAGCAATGGCCACGAAGAATTTTAATAGATATCTGACTATTTGTATCCAGTCCATATTCCCCCATGCTTGGAAAGTAAGCACTATGTCCAGAGTTACTTTAATGAAGTTGAGTAGAGCAGCTGTTATAAAGACACTTAAAACACTTCTGAAAACAGTTGCATCAGCAAGCGCAGAAAGAGATCCAGACGAACTCCATGATACTATTAGCATTGCCTGAAAAGCTAGTATGAAAAACATCCACATTCGATTAAAACTTCTAAATATGTGTAGAAATGTGCGGACTTCAACAAAATTCGTTTTGGGCTTTGTTGATGTAGTGCGCCCTTGATAAAAGAAGTCCGCTGTAAGGTCCCATGGCCAGTTAAGCCTTGCAAAACATTTCTCTGACCAAAAGTGTTCGTTCAAATCGTCATAGTTTCTCCAAGTAGAGTGGCCAGCTGTACCACCTTTACTCTTATGTGCTTCTTTCTGCAAAACCTTGTAGATAGGTTCAATGGCAGTTTTCAGAAATGATCCCTCTTCTTCAAATCCTGGTGGTGATTGAAAATTATTTTCTTCGATCATTTTGTGCAACTGTCTTGCCATATGGTGAAATATGTAGCACAGGCACTCAGGCATAAAACGAACATTCGAGGCCTCACCCCAGATAAGAAGATACAACCCAATGTGAAGGAGCATTAATTGTTGTTTATTTTGTGTGACTGTCTCAACGTTCATGATACTTGAACTAACATGCAAATAGCTACACCATGATTGGTAGTTCTGAAGTATCTTTTTCCATAATTTATTCACAGTGTCAACCAGAGGATGGTCTTGCCCAGCAGTCCTTGTGCCAATATTTGCGAGCAGCAAAACCAAGTTTTCTCTTTGATTTTCCACATTTGATTTCTGAAATCCAAATGCTAGTGAAAGCCAGTCAAGTAAATCTCGTATGGATTTATTCCCATCCGTGTGCATAGTAGACATGTGTGGCATTGGAAGGCCATCGATGCTATTTAGCGCATCAATAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0022000.1 | 1 | 19303743 | C | G |
| Osa01LNT0022000.1 | 1 | 19303917 | A | G |
| Osa01LNT0022000.1 | 1 | 19304562 | T | C |
| Osa01LNT0022000.1 | 1 | 19305040 | C | T |
| Osa01LNT0022000.1 | 1 | 19306726 | G | C |
| Osa01LNT0022000.1 | 1 | 19306758 | G | A |
| Osa01LNT0022000.1 | 1 | 19307874 | G | A |
| Osa01LNT0022000.1 | 1 | 19308213 | C | A |
| Osa01LNT0022000.1 | 1 | 19308289 | G | A |
| Osa01LNT0022000.1 | 1 | 19308820 | T | C |
| Osa01LNT0022000.1 | 1 | 19309010 | G | T |
| Osa01LNT0022000.1 | 1 | 19309253 | G | A |
| Osa01LNT0022000.1 | 1 | 19309710 | G | A |
| Osa01LNT0022000.1 | 1 | 19309855 | T | A |
| Osa01LNT0022000.1 | 1 | 19311650 | T | C |
| Osa01LNT0022000.1 | 1 | 19311665 | A | G |
| Osa01LNT0022000.1 | 1 | 19311820 | A | G |
| Osa01LNT0022000.1 | 1 | 19312039 | C | T |
| Osa01LNT0022000.1 | 1 | 19312324 | T | A |
| Osa01LNT0022000.1 | 1 | 19312327 | A | T |
| Osa01LNT0022000.1 | 1 | 19313125 | T | C |
| Osa01LNT0022000.1 | 1 | 19313345 | C | A |
| Osa01LNT0022000.1 | 1 | 19313520 | C | A |
| Osa01LNT0022000.1 | 1 | 19314068 | C | T |
| Osa01LNT0022000.1 | 1 | 19314349 | C | G |
| Osa01LNT0022000.1 | 1 | 19314384 | G | A |
| Osa01LNT0022000.1 | 1 | 19315271 | A | G |
| Osa01LNT0022000.1 | 1 | 19316156 | A | G |
| Osa01LNT0022000.1 | 1 | 19316348 | C | T |
| Osa01LNT0022000.1 | 1 | 19316426 | G | T |
| Osa01LNT0022000.1 | 1 | 19316525 | C | T |
| Osa01LNT0022000.1 | 1 | 19316692 | A | G |
| Osa01LNT0022000.1 | 1 | 19316868 | G | T |
| Osa01LNT0022000.1 | 1 | 19317132 | A | C |
| Osa01LNT0022000.1 | 1 | 19318439 | C | G |
| Osa01LNT0022000.1 | 1 | 19318527 | A | T |
| Osa01LNT0022000.1 | 1 | 19318702 | A | C |
| Osa01LNT0022000.1 | 1 | 19318807 | C | A |
| Osa01LNT0022000.1 | 1 | 19311042 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0022000.1 | osa-miR5806 | Translation | 4.5 | 14.768 | 1 | 21 |
| Osa01LNT0022000.1 | osa-miR5820 | Translation | 5.0 | 21.842 | 1 | 21 |
| Osa01LNT0022000.1 | osa-miR5820 | Cleavage | 4.0 | 17.047 | 1 | 21 |
| Osa01LNT0022000.1 | osa-miR5179 | Cleavage | 4.0 | 18.581 | 1 | 21 |
| Osa01LNT0022000.1 | osa-miR6245 | Translation | 5.0 | 12.041 | 1 | 21 |
| Osa01LNT0022000.1 | osa-miR5512b | Translation | 5.0 | 13.49 | 1 | 21 |
| Osa01LNT0022000.1 | osa-miR156a | Cleavage | 5.0 | 8.416 | 1 | 20 |
| Osa01LNT0022000.1 | osa-miR156b-5p | Cleavage | 5.0 | 8.416 | 1 | 20 |
| Osa01LNT0022000.1 | osa-miR156c-5p | Cleavage | 5.0 | 8.416 | 1 | 20 |
| Osa01LNT0022000.1 | osa-miR156d | Cleavage | 5.0 | 8.416 | 1 | 20 |
| Osa01LNT0022000.1 | osa-miR156e | Cleavage | 5.0 | 8.416 | 1 | 20 |
| Osa01LNT0022000.1 | osa-miR156f-5p | Cleavage | 5.0 | 8.416 | 1 | 20 |
| Osa01LNT0022000.1 | osa-miR156g-5p | Cleavage | 5.0 | 8.416 | 1 | 20 |
| Osa01LNT0022000.1 | osa-miR156h-5p | Cleavage | 5.0 | 8.416 | 1 | 20 |
| Osa01LNT0022000.1 | osa-miR156i | Cleavage | 5.0 | 8.416 | 1 | 20 |
| Osa01LNT0022000.1 | osa-miR156j-5p | Cleavage | 5.0 | 8.416 | 1 | 20 |
| Osa01LNT0022000.1 | osa-miR395b | Cleavage | 5.0 | 12.356 | 1 | 21 |
| Osa01LNT0022000.1 | osa-miR395d | Cleavage | 5.0 | 12.356 | 1 | 21 |
| Osa01LNT0022000.1 | osa-miR395e | Cleavage | 5.0 | 12.356 | 1 | 21 |
| Osa01LNT0022000.1 | osa-miR395g | Cleavage | 5.0 | 12.356 | 1 | 21 |
| Osa01LNT0022000.1 | osa-miR395h | Cleavage | 5.0 | 12.356 | 1 | 21 |
| Osa01LNT0022000.1 | osa-miR395i | Cleavage | 5.0 | 12.356 | 1 | 21 |
| Osa01LNT0022000.1 | osa-miR395j | Cleavage | 5.0 | 12.356 | 1 | 21 |
| Osa01LNT0022000.1 | osa-miR395k | Cleavage | 5.0 | 12.356 | 1 | 21 |
| Osa01LNT0022000.1 | osa-miR395l | Cleavage | 5.0 | 12.356 | 1 | 21 |
| Osa01LNT0022000.1 | osa-miR395s | Cleavage | 5.0 | 12.356 | 1 | 21 |
| Osa01LNT0022000.1 | osa-miR395t | Cleavage | 4.5 | 12.356 | 1 | 21 |
| Osa01LNT0022000.1 | osa-miR396c-3p | Cleavage | 5.0 | 16.875 | 1 | 21 |
| Osa01LNT0022000.1 | osa-miR160f-3p | Translation | 4.5 | 16.873 | 1 | 21 |
| Osa01LNT0022000.1 | osa-miR167h-3p | Cleavage | 4.5 | 16.527 | 1 | 21 |
| Osa01LNT0022000.1 | osa-miR167h-3p | Translation | 4.5 | 21.54 | 1 | 21 |
| Osa01LNT0022000.1 | osa-miR166h-5p | Cleavage | 5.0 | 16.06 | 1 | 21 |
| Osa01LNT0022000.1 | osa-miR418 | Cleavage | 4.5 | 13.072 | 1 | 21 |
| Osa01LNT0022000.1 | osa-miR418 | Translation | 5.0 | 10.984 | 1 | 21 |
| Osa01LNT0022000.1 | osa-miR535-5p | Cleavage | 4.5 | 6.5 | 1 | 21 |
| Osa01LNT0022000.1 | osa-miR395m | Cleavage | 5.0 | 12.356 | 1 | 21 |
| Osa01LNT0022000.1 | osa-miR395n | Cleavage | 5.0 | 12.356 | 1 | 21 |
| Osa01LNT0022000.1 | osa-miR395p | Cleavage | 5.0 | 12.356 | 1 | 21 |
| Osa01LNT0022000.1 | osa-miR395q | Cleavage | 5.0 | 12.356 | 1 | 21 |
| Osa01LNT0022000.1 | osa-miR395v | Cleavage | 4.5 | 14.88 | 1 | 21 |
| Osa01LNT0022000.1 | osa-miR395w | Cleavage | 4.5 | 12.356 | 1 | 22 |
| Osa01LNT0022000.1 | osa-miR395r | Cleavage | 5.0 | 12.356 | 1 | 21 |
| Osa01LNT0022000.1 | osa-miR816 | Cleavage | 5.0 | 21.007 | 1 | 20 |
| Osa01LNT0022000.1 | osa-miR1428a-5p | Translation | 4.5 | 11.945 | 1 | 21 |
| Osa01LNT0022000.1 | osa-miR1854-3p | Cleavage | 3.5 | 20.635 | 1 | 22 |
| Osa01LNT0022000.1 | osa-miR1861g | Cleavage | 5.0 | 18.97 | 1 | 22 |
| Osa01LNT0022000.1 | osa-miR2101-5p | Translation | 3.5 | 10.613 | 1 | 22 |
| Osa01LNT0022000.1 | osa-miR2118e | Cleavage | 5.0 | 19.93 | 1 | 22 |
| Osa01LNT0022000.1 | osa-miR2118r | Cleavage | 5.0 | 19.93 | 1 | 22 |
| Osa01LNT0022000.1 | osa-miR395y | Cleavage | 5.0 | 12.356 | 1 | 21 |
| Osa01LNT0022000.1 | osa-miR5149 | Cleavage | 1.5 | 12.323 | 1 | 22 |
| Osa01LNT0022000.1 | osa-miR5491 | Cleavage | 5.0 | 16.534 | 1 | 21 |
| Osa01LNT0022000.1 | osa-miR5491 | Cleavage | 5.0 | 10.788 | 1 | 21 |
| Osa01LNT0022000.1 | osa-miR5497 | Translation | 4.5 | 15.532 | 1 | 21 |
| Osa01LNT0022000.1 | osa-miR5499 | Cleavage | 5.0 | 9.161 | 1 | 21 |
| Osa01LNT0022000.1 | osa-miR5507 | Cleavage | 1.5 | 14.768 | 1 | 21 |
| Osa01LNT0022000.1 | osa-miR5512a | Translation | 5.0 | 13.49 | 1 | 21 |
| Osa01LNT0022000.1 | osa-miR5524 | Translation | 4.5 | 13.646 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0022000.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0022000.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0022000.1 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Osa01LNT0022000.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0022000.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0022000.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0022000.1 | 1 | qNVB-1-1 | Morphological trait | Culm/leaf | R2159 | C178 |
| Osa01LNT0022000.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)