© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0244900.1
CAGGGCGACCAAAAATGTGCAGCAACATGGCAAAGTGGTTTGTTACACAACTGCTTTGACTTCTTCCTGAGTTACAAAAAGGCATTTCTTCCTTGCTCATCTAAACAAACGACAGTTCCCTCGCTACTAGTACTACAAACGAACTCACTAGTCACTACCAAAGCAGCTCAACATTCACAAAAAATGCGAACAAGGCGCTACATATTTCCTGCCGGATCGCTCCACCATCCATGCACATCTATGAGCCAATTTCAAACATCAATAATGCACCAAGAGTCCCCACGCGTTTCATATTCAAAACATGAGCTGCTACAACCTTGTGCTTCTGCAATGTTGAGGCGTTTTCTATCGCATGATTGCCTCCTCTCAGACATCTCCAGGTGCCTGCTTCTGCAATGTTGTCCTCATAAAATCCGAGATCCGTGACGATGCAGCAAGGCCCCTCTCTATGCAGCTGAAATAATCTTCCTCGGACATCACTCCATGGGTAATGGAAGTTATCAATCCTCTCTCAGAATCCTCCTCTTTCTGGTTTGGTTCTTTTGAACTAGCAGACTTGCGTGAATTGGGGAACACCAAATGAGCAAATGATTTCAATTGCTGCTCTTCTGCTTTGTTTGTGTCCAAAATCACTTCACCATCCTCCAGTACTCCACAACCAATTGCAACTGCAAGATGTTTCAAGGGGATGCCAGCAAAAACAAGGGCTGCGCAGCAAGCATTAATTGCACATGGAAGAAGCTAGACTTAGTCAAGGATTGTGCTTGATTGAAATCTTGAAGACCGAAATACTAAGAATCTGTGAATATTACAAAGAACATACTACATGTTGATATCTGCTATAGCAGGCCATGCCCATTCATATAAAGCACGCTGTATACAGTATGTTGATTGGAAGACTACTCAGAAAAAGCATGGAACCAGGGACTTCCATCAATACTTGGCATTTTCTCATCACAAGTCAGTTATATTAGCCGGCCAAAACAAACATTTTGCGAGGCAAAGAATTCAGGAATAAAACAACGAACCACTTATCCTAACTGTAGACAACCAGCTGAAATTAGCAGTTAGCTTATGAGATTCACAGAGATACAGGAAATTAAATTCAAATGCCAATCTACTGCAGCTAGTAGCCAAAAATCTGAAATCATTCCTATATCAAGTACAATGTTCATAATCCAAAAGGCACCCAGAAACAATACTAAGTAGTACATTACGGCAAAAGGATACAGAACCATCATTGCCCACAACCTGAAGAATGACAGAGGTGGTGGTGTTTGGATGAACAGTGAGCAGGCAAATGCTCTGCAATGTCCTCTTGAGCGTCATCTCATACTCCTTCTCTTGCTTCCCAATCTGGCCGGTCATGGGCTTCCAGACGACCTCAATGGATGCCTTCTCGGGATTCTCCCCCTTCCTGGTTCCCGGCTTTGGCCCGTACACGGCGGCGAGCACGATGGTGTCCCCCTGAGCCCACCGCGCGGAGCCATGGGCGCGGTCGAGAGGGTTGCGTGTGCAGGAGAAGGGGCGGAGCTGGTTCGGGTTCCGCCCGTCCGCGCGGCTCTCCTCCATCCTCTCTCCTTCGGCGATGGGAACCAGCGTGACGGCGGCGGCGGTCGTCGAACTCCAGAAACC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0244900.1 | 3 | 35981125 | T | C |
| Osa03LNT0244900.1 | 3 | 35981909 | C | T |
| Osa03LNT0244900.1 | 3 | 35982080 | C | A |
| Osa03LNT0244900.1 | 3 | 35981109 | A | C |
| Osa03LNT0244900.1 | 3 | 35982117 | T | G |
| Osa03LNT0244900.1 | 3 | 35982384 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0244900.1 | osa-miR5818 | Cleavage | 4.5 | 12.889 | 1 | 21 |
| Osa03LNT0244900.1 | osa-miR1440b | Translation | 5.0 | 13.56 | 1 | 21 |
| Osa03LNT0244900.1 | osa-miR7695-3p | Cleavage | 5.0 | 12.653 | 1 | 21 |
| Osa03LNT0244900.1 | osa-miR1879 | Translation | 3.0 | 11.474 | 1 | 24 |
| Osa03LNT0244900.1 | osa-miR1882e-3p | Translation | 3.5 | 17.585 | 1 | 24 |
| Osa03LNT0244900.1 | osa-miR2098-5p | Cleavage | 4.5 | 20.889 | 1 | 20 |
| Osa03LNT0244900.1 | osa-miR416 | Translation | 4.0 | 24.498 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0244900.1 | 3 | qLT3-1 | Morphological trait | Shoot/Seedling | RM227 | R1925 |
| Osa03LNT0244900.1 | 3 | qPL3-1 | Morphological trait | Panicle/flower | R1925 | RM227 |
| Osa03LNT0244900.1 | 3 | spp3.1 | Morphological trait | Panicle/flower | RM130 | RG1356 |
| Osa03LNT0244900.1 | 3 | yld3.2 | Morphological trait | Seed | RM130 | RG1356 |
| Osa03LNT0244900.1 | 3 | QFll3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0244900.1 | 3 | QSn3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0244900.1 | 3 | qSV-3-2 | Physiological trait | Germination/dormancy | RM227 | RM85 |
| Osa03LNT0244900.1 | 3 | nan | Morphological trait | Panicle/flower | G249 | RG418 |
| Osa03LNT0244900.1 | 3 | Qbp1 | Resistance or Tolerance | Insect resistance | R1925 | R2443 |
| Osa03LNT0244900.1 | 3 | Qsbn3b | Morphological trait | Panicle/flower | RM227 | RM85 |
| Osa03LNT0244900.1 | 3 | Qsnp3b | Morphological trait | Panicle/flower | RM227 | RM85 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)