© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0245100.1
GGAACGAAATATCCACAGGAGATATTGATGAATTCAAGCCGCAGCTACATTTGACGGCGAAAAAGAACAACACTACAGCCGGTAGTCGAGAATACCATGCATGGTTATACAACCAAACAACATGTTGTCAACAAGGAAGTTTAGACTAGTTTTGTTTGTCAAGAGCTAAAGTCTGTGCATTACGGCACAAACGTTTTACACACATTTCCTTGAGCTCTCTTTGCTCAACCCGACTCCTCCACAGCTTGTTATGTCGGCAAACTGTCATTTTTAATTACGGACTAGCACCTCCTCCCCTTCCAGGTGCTCTTGGCGCTTGTTCAGTTGCTGCCATGGGTGGCAACTTCTGCTGAAGTCTCACTACTGTAGAAACCAAAAGCTTGTCACCAACAATCTGTCTCAGCTGCTTCACTAGGTCAGGCCTGCTTATCTTTCTCCTCTTGAATTCTTCATAATATTTATGCACCAGATCCATGTCCGAACGGGGTACTTTAGCGGAAATAGCAGCAAAAAGCATTGAAAAGGGCATCCAAGGTGAACTAGGAGACCTTGGACTTGGAGCACGCCCAAGCATACATGCTTGTTGTTCATCACCTGAAGACGCAATGGTCTGTAGACTGTCATCCTTGGTTGGATTGTCTAGTGCACCAGAATTTCTTATCTCAGAGATATTGGATGCAGTATCTCCATTGTTCATGTAAGGTACTTTGATAATAACAGCATATTCAGCATAAATGTGCTTATGCACATTAGCATCCCATATGATGTAATGCTTTGGCCTTTGGAGATCATCCACACCACTGTCAAAACTTTCACTGGTTGGCTGGCATTGATTTGATCCAGGGAAAACCACCTCAACATTCCCCATTATAACACGGCACAACATCATCCTTATGATTCCATTTTCGTCAATATCAGATAAACCAACACAGATATTGGAGGAGTTTGCTGGAGCAAGATGAGCCCCAACACCATACATTGGACCCTGCAGAGGTTTTGCTATTTCCAAAGCACCATTCATCATCATCTCCTCCATAGTACCCTTAGTGCAAGCAAGCCATGCATAACGCTCATTTGCATTTCCCCGTTGATTTTTTGTGACTTGTACCTCCTTCTGGAAAAGACTATAACGGGACCTCCCAAGTTGATCTAGCATTGGGGTTCTATAAATACCGATGATGTCTTTTTCAGTAAATAGATGGCCTGATCCTTGAAACAACAAATTCCGAACAGCTGAATCAGCACGCTGGACACTTTGATTATTACGAGGAGCTTGCATGGCCCCATCAGCAGTTTCATTCATATGGCTTAAATGGCCCTTTTTATTTTCCCCAGAAACTTCACCACTTTCATTGAGTACCTTCTGTTTGTCCTCCACTACATTATTGACCTCCTGAACATCAGAAAGCACTGCATCAAAAGACGCTGAACTTGAGCTTTCAGCTGCAGACATCCCATCATGTTCATGAGCTTCATAACTACTGCTTAGATCATGAAAACTTTTCAAGAACTCATTTTTTCCATGCTGCAGAGGTTCAGATGGTATTACTCCAGCACATGAATCCGGAGAGAAGCATTTACCATGATCATCGATCCAAGCAATTGGCTTGCTTATGGCCATCACAGAATCTAAACAAACCATCTGCATGAAGTCCAACAGGATGTGCCTGTTCTGGAATACTGCACTAGTAATTGGCCTCTTCAACTGGAAGCTCTGCTGTACCGAATTGACAACATCCTCTGGGAAGTCTCTCCATCCACCATGTTGGTGAGACATCACACGAACAGGCATCCCGCTTATCTTGAAGTTATTGTACCTCTCCAGAATGTCATCGGCAGAGCACATCATCTTGGACTTCTTATGTCCAGTCGAATCAGGAAATAAAGCGAGATTCTGTTTTGGACCATTCTGAGAGAGGTTGGGGGCGTCATTGGCCTCAGCACATTGAGTAGCACCCACACGCTTCCTCTTGCGGATAGTAGAATCCAGCACATGTTCATCCAGTGCAATTGCATTCTTTGGTTCCATTTTTTTTTTTTACAAAAGACTCAACTAAGACTGGGTATTCATTTTCTTTACAGACTAACACCACTAAGTGAAAACAGTTAAGTTAATCTAGCTAATGAGACCTAGACAATGTTAGCATAGAGGTAGTTCCGATATAAGCCATGCTATCCAAAAGAGTAAGTGAAATACACCGGTAGGAGGTGGTCATCGCGTCGCGGGTAGAGATAGAATCGATTTCGATGTGGTTGAATCAAATCGAAAGGTAAAGGAAACCAGATAGAGATCGATAAGGGTGGTAGTAGAGAGGGCAGGATAGGCCTTGTAAAGAGGCGAATCCAATCCCGTGGGCCGGCGGGAGGGCGGCGGCGGTGGGGGAGATATTCCGGCGGGCGGCAATCCTAGCCTTGCCTTGCCTAGGGGCGGAGGAGGAGGATTCCGGTGGGCGAGAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0245100.1 | 3 | 36003355 | A | C |
| Osa03LNT0245100.1 | 3 | 36003646 | T | C |
| Osa03LNT0245100.1 | 3 | 36004608 | C | T |
| Osa03LNT0245100.1 | 3 | 36005441 | G | A |
| Osa03LNT0245100.1 | 3 | 36006352 | A | G |
| Osa03LNT0245100.1 | 3 | 36006754 | T | G |
| Osa03LNT0245100.1 | 3 | 36007038 | G | T |
| Osa03LNT0245100.1 | 3 | 36003635 | T | C |
| Osa03LNT0245100.1 | 3 | 36005191 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0245100.1 | osa-miR6255 | Cleavage | 4.0 | 15.558 | 1 | 22 |
| Osa03LNT0245100.1 | osa-miR395b | Cleavage | 3.0 | 9.375 | 1 | 21 |
| Osa03LNT0245100.1 | osa-miR395d | Cleavage | 3.0 | 9.375 | 1 | 21 |
| Osa03LNT0245100.1 | osa-miR395e | Cleavage | 3.0 | 9.375 | 1 | 21 |
| Osa03LNT0245100.1 | osa-miR395g | Cleavage | 3.0 | 9.375 | 1 | 21 |
| Osa03LNT0245100.1 | osa-miR395h | Cleavage | 3.0 | 9.375 | 1 | 21 |
| Osa03LNT0245100.1 | osa-miR395i | Cleavage | 3.0 | 9.375 | 1 | 21 |
| Osa03LNT0245100.1 | osa-miR395j | Cleavage | 3.0 | 9.375 | 1 | 21 |
| Osa03LNT0245100.1 | osa-miR395k | Cleavage | 3.0 | 9.375 | 1 | 21 |
| Osa03LNT0245100.1 | osa-miR395l | Cleavage | 3.0 | 9.375 | 1 | 21 |
| Osa03LNT0245100.1 | osa-miR395s | Cleavage | 3.0 | 9.375 | 1 | 21 |
| Osa03LNT0245100.1 | osa-miR395t | Cleavage | 2.5 | 9.375 | 1 | 21 |
| Osa03LNT0245100.1 | osa-miR395a | Translation | 4.0 | 9.375 | 1 | 21 |
| Osa03LNT0245100.1 | osa-miR395f | Cleavage | 4.5 | 9.375 | 1 | 21 |
| Osa03LNT0245100.1 | osa-miR395u | Cleavage | 3.5 | 9.375 | 1 | 21 |
| Osa03LNT0245100.1 | osa-miR395u | Translation | 5.0 | 11.909 | 1 | 21 |
| Osa03LNT0245100.1 | osa-miR160f-3p | Translation | 5.0 | 14.136 | 1 | 21 |
| Osa03LNT0245100.1 | osa-miR440 | Cleavage | 4.5 | 13.368 | 1 | 24 |
| Osa03LNT0245100.1 | osa-miR395m | Cleavage | 3.0 | 9.375 | 1 | 21 |
| Osa03LNT0245100.1 | osa-miR395n | Cleavage | 3.0 | 9.375 | 1 | 21 |
| Osa03LNT0245100.1 | osa-miR395p | Cleavage | 3.0 | 9.375 | 1 | 21 |
| Osa03LNT0245100.1 | osa-miR395q | Cleavage | 3.0 | 9.375 | 1 | 21 |
| Osa03LNT0245100.1 | osa-miR395v | Cleavage | 4.0 | 9.375 | 1 | 21 |
| Osa03LNT0245100.1 | osa-miR395w | Cleavage | 4.0 | 9.375 | 1 | 22 |
| Osa03LNT0245100.1 | osa-miR395r | Cleavage | 3.0 | 9.375 | 1 | 21 |
| Osa03LNT0245100.1 | osa-miR1424 | Translation | 4.5 | 19.486 | 1 | 21 |
| Osa03LNT0245100.1 | osa-miR1853-3p | Cleavage | 4.5 | 12.427 | 1 | 22 |
| Osa03LNT0245100.1 | osa-miR1853-3p | Translation | 5.0 | 24.804 | 1 | 22 |
| Osa03LNT0245100.1 | osa-miR2880 | Cleavage | 4.5 | 12.57 | 1 | 24 |
| Osa03LNT0245100.1 | osa-miR395y | Cleavage | 3.0 | 9.375 | 1 | 21 |
| Osa03LNT0245100.1 | osa-miR5507 | Cleavage | 4.5 | 11.714 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0245100.1 | 3 | nan | Morphological trait | Panicle/flower | G249 | RG418 |
| Osa03LNT0245100.1 | 3 | Qsbn3b | Morphological trait | Panicle/flower | RM227 | RM85 |
| Osa03LNT0245100.1 | 3 | Qsnp3b | Morphological trait | Panicle/flower | RM227 | RM85 |
| Osa03LNT0245100.1 | 3 | nan | Morphological trait | Root | R1925 | RG1356 |
| Osa03LNT0245100.1 | 3 | qLT3-1 | Morphological trait | Shoot/Seedling | RM227 | R1925 |
| Osa03LNT0245100.1 | 3 | qPL3-1 | Morphological trait | Panicle/flower | R1925 | RM227 |
| Osa03LNT0245100.1 | 3 | QFll3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0245100.1 | 3 | QSn3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0245100.1 | 3 | qSV-3-2 | Physiological trait | Germination/dormancy | RM227 | RM85 |
| Osa03LNT0245100.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | R1925 | RG1356 |
| Osa03LNT0245100.1 | 3 | Qbp1 | Resistance or Tolerance | Insect resistance | R1925 | R2443 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)