© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0245600.1
ACTAAAAAGCAACAGAGCATTTGAATTCCAATTACTAGTCTGTCTTCTTCATCCAAACAAAGCCAGCCCAACACAACACAGGGCACCTCTCCAATAAAATACAACCAACCTCACATCTTGTTACTACCACTGCACAGTGCTGCAGCCACAAATTAAATACTACTATCTGTAATGCAATGCGATGCTCCTACAATCAACAAAGCCACATGCCAAATCAGAATATTATACACACCCTCTAAGCAAATATGCCCATGCCCAACACACGGAGGGGATGCAAATGATCCATTGCATCCCTCAAACAACACACAAATACAATTAGTCATGGACATTCATCTTGTCCAAGCCAACTCATCCTTGCGCCAAGCTACGCACTTGGGTTTGACGACGAGGGATGCCAATCTCGCACGAGTTCACCCGTGCTGCGAACCGTAGCGAGCAAATTGACTCCCCTGTAGACGACACCTCTGGAGACAGATTCACAAACATAAGTGTCTTCGAGTCTCCTCCAAGGCATGGCTGTAGCAGGTACGTTAATTTTGAGTTCCTGAATGGAACGTGCTCCTCTTTCTTTGCAATGGAGAAGATTACATCGCTCAAGCACGAGAGGCTTTTATTAATAGCCTGTGTCTCCTTTAGCCTATCTCCGGTGGCACCGCTCTTGTTAAGCCGCTCACTGCCGGCAAGATCGATTAGATTGAGCACTCCTTGCACCTGCTGGTCTGTTCCCTCATTGACACCAAAAAATCGAAGCGTGAACACACAATGACTTCTAGATGATTCTTCGTTCATCTGTGTTCTTCCAACAGATCTGCTCTGAGCAGCCCGCTTGAGGAGAGAAGAAACTTCATTGATACTCAACACATCGACGATTATGAGATCTGATACATGGGTATTACCATTGGCATCATGCTTGATACTGTACTTTGAAGCGCCACCATCTTGAATAGTTGTGTGATTAGTGGCTAGCAGATCACATATGGCTTCATTGTAGATTTCCAACATAGATGCCTGCATCTTATATTTCCATCCCTGTGAAATAAGAGCCTGGCTTGTTTGGAAAATTTGTTCAAGTGATCTCGGAATTAATCCTTTCTGGTCATGTAATTCTGGATTTCCCATCATTGTGTATGTTTTACCCGAGCCAGTTTGGCCATATGCAAATATGCACACCTTGTAGCCATCAAGGGCGCTCTGGACGAGATGGGAAATCTCAATGAACACATCTTCTTGTGATGTCGACTGCTCAAATACTTTGTCAAATGTGAAGAAATACATTTGACCATTATGTGTCAACTCAATGCCACGACCTAAGTTTTCTCCACTCTTTGGATAAGCAACAGCTCCTGATTCATTTGGCAATAAAGGTCGCACCCTACAGAAGACTCGAATGTTTCCTTTAAGCTCCTGCAATGCAAGAGTCTTAGCAACAACACTAGAAACATAAGTCTTCGATATTCCCGTCCGTGTCGCTCCCGTCCCTAGGCGACCCGGACGGCGCCTCCCCACAACCCACCGCCGCCACCCCCTCTCTCCTCCCTCCGCCTCATCGCCGCACGAGCGGCTGGCCGGCAAGCCGGGCGGCTGCAGGGACGGCGGTGGCGAGGCTCTCTCTCTCCCGAAGGCTGCTACGGCGGGGACACCGGCGCGCCTTGACGGCGGGGGTTGTCGCGCCGGCCAGATCTGGCCCCTCCGGCGAGAGGCCAGCGGGCGGTGACGGCGGCCGGGTGGCGACGACATGACCCAGCTGCTGCGGTGGACGGCGGGATGGAGCCTGGGCGGCAGCAGGAGATGGCAACGACGGCTGCTGGATCTGGCGCTCCATTGCTATATCCGGTGGTCTCGCGAGCGACTTCGGCGAGCAAGACCAGAGCGGCGACGGTGAGGTCGCGTCCGGTGACAGCCTGGTTGTGCCGGTGGCGCCCCAACGGGATCTGGCCGCAGCACAGACACGCAGTCGGGACGGCGACCGTGGTGGCGGCGACGGCTGAGGTAGCCACGACAGCGAGGTGGCGGTGGCGGTTGAGGCAGTCGCAGCTGTGGCGGCGGCTGCATGCGGTATCGACCGTGGCTGAGTGGGAGGAGGCACGGCGGCCTCGGATGGCTAGCCGAGCGCGTGGCAAACGGCTGCAACTAGACGGCGCGACAGCGTTTGGAGGAGGGGTCGGAGACCG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0245600.1 | 3 | 36405108 | C | T |
| Osa03LNT0245600.1 | 3 | 36405146 | A | T |
| Osa03LNT0245600.1 | 3 | 36405260 | T | C |
| Osa03LNT0245600.1 | 3 | 36405323 | T | C |
| Osa03LNT0245600.1 | 3 | 36402849 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0245600.1 | osa-miR5544 | Translation | 4.5 | 6.485 | 1 | 22 |
| Osa03LNT0245600.1 | osa-miR5794 | Translation | 4.0 | 16.623 | 1 | 21 |
| Osa03LNT0245600.1 | osa-miR1427 | Translation | 4.5 | 8.641 | 1 | 21 |
| Osa03LNT0245600.1 | osa-miR2093-5p | Translation | 5.0 | 18.339 | 1 | 20 |
| Osa03LNT0245600.1 | osa-miR5499 | Cleavage | 5.0 | 16.26 | 1 | 21 |
| Osa03LNT0245600.1 | osa-miR1862f | Cleavage | 3.5 | 7.133 | 1 | 20 |
| Osa03LNT0245600.1 | osa-miR1862g | Cleavage | 3.5 | 7.133 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0245600.1 | 3 | QFll3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0245600.1 | 3 | QSn3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0245600.1 | 3 | qSV-3-2 | Physiological trait | Germination/dormancy | RM227 | RM85 |
| Osa03LNT0245600.1 | 3 | nan | Morphological trait | Panicle/flower | G249 | RG418 |
| Osa03LNT0245600.1 | 3 | Qsbn3b | Morphological trait | Panicle/flower | RM227 | RM85 |
| Osa03LNT0245600.1 | 3 | Qsnp3b | Morphological trait | Panicle/flower | RM227 | RM85 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)