© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0245900.1
ACAAATAGTAAGTAGCACACCTTAACAAATATCTCAAAGTCCACAAGCGTTTCAATTTGGTTGATAAACAAACACAACATTGTTATGTAAGCTACATGGATTTGGTGTACATGCTCATTTCATTTTCTTCTAGAACTCGCACTAGTTATTCTCTATATGCGCACCAATTTCTACTAATCACATAAGTCGCTTCAGCATAAAAGTTGGCTTCTCTGGACTACAAAATTGTGTCTATTGTTTCAGGTTACCGTGTAAAATGGTGACCATATTTTAATTCCAAGGATAGAAGCACGCATTGACGGGCTTGGTCATTCACTTGCTTCCATTACATGCATCGCCATTGTGTATCCTAATGCCACTCAAAATATAACCACCAAATGCATTCATTTGCATGTGTGGATGAGTTCGTGATGGAAGGACCTGGTATTCACGAAGCCAGGGTTCAGAAATTTGTAATCCGAGAGCCATTTTTGATACTTGCAAGCTGTGCATGCATGTTGCGAGAGGCTGAAGGTATTGGTGATAGATAGCAAATGGAGCTGAATAAGACAAGAGGGGAAGCAGATCAGCAACAAAACTTTCAACATCATGCCCCGGAGCAGCAACAATCAAACTGCTAAATCCATGTTCACTCCAATATTTCATCCTCTCTGGTGATGGTGCCTTTCCTGCCTTGAGTGATTTGGGACCTATTGAACTTCCATCCTCATCTCCTTTACTATCTAAAGAAGAATTGCCATCCTGATTAATGTGCTCATCCAATAAGGGCTCAGGGATATCTATATCAATAGATTGTTCTTTAGGTGACTGTGTTTTCTCATCTGGTACTGCTGTGTCAGTTGGTTGTGGTACAGATGGCTGAGTATTCTCCACTGGTACTGCAGTGGGCTCTTGTGCCTCACCCTGAATGCTATCATTAAGACCAGAAGACACATCGACAGAGTTTTGCAAGGAGCAGAGGTCACTTAGTGGTGCCTGGTAGTCATGTCACTGCTCAAATTATACATCCTTATAATGTCTATGGAGCTAGCAGCAGATCCAAGATATGTGCTGCAAACATACCCAGTACCTCCTAAGCGTTCAGCTACAGCTCCAACTACTAAACCTCCAACCATATCAACCACAAGGACATCCGAATATGGACCAACATTTGCCATAGACAACAAGAGGGACAGTGCATCAACTCGCATAAACCCTGTTCGAGCTGGGCTTTTCTTGAAATATGTCTCACAAATGCTTCGGGTAGAGGGGCGCCGTAAAAGCACTTTGGGTGCATATTTCTTCTGTTTCTTTAGTTTGTATTTCTCTTGGGAAAAAAGGGTCTTCTTCCCAAATGTGGAGCTATTTGCTATCAAAGCTTCTACAATCTCATCACCACTTACACCATCTCTCTTCATTGCCTCTATGTCATCGCTAGATAAATTCTGTGCTGTATTATTATCGACAAGAGATCTATTGTCCCTAGTTTCATCCTGCGAGGGACCATCAGCAGCATCTTGCGTTGTATCATCGCGAGAAGATGGGGCGTCGGCGCAGGGGACGAGGCCGGAGGGGCCGACGCTGAAGAGGGAGCCGAAGGGGCGACCGACGAGCGGCTGCAGCGAGCAGGTCCTGTTCCCCACCTTGACCGTCCTGCACGACCGGAAGAGAGGGAAATCAGGTCTAGGGTTTTTGGGGGGGAAGGGAGGAGACGCGAGGTCGAGGAGGAAGGGAGGTGCGGACGCGGCGGGGGTGAGGCGGAAGAAGGCGAGGCGGTCGCCGTCGTTGATGTCGAGGAGGACGCTGCAGCCCTCCCATGCCTCCCGGGGAATCGCCGCCATTTTTTATTTTTGGAGGGGATGCAGCGGCGGAGAGGAGAGGAGAGAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0245900.1 | 4 | 715890 | A | G |
| Osa04LNT0245900.1 | 4 | 715981 | A | G |
| Osa04LNT0245900.1 | 4 | 716241 | T | C |
| Osa04LNT0245900.1 | 4 | 716411 | A | G |
| Osa04LNT0245900.1 | 4 | 716591 | G | A |
| Osa04LNT0245900.1 | 4 | 716766 | A | G |
| Osa04LNT0245900.1 | 4 | 717032 | A | T |
| Osa04LNT0245900.1 | 4 | 717389 | C | G |
| Osa04LNT0245900.1 | 4 | 717438 | T | C |
| Osa04LNT0245900.1 | 4 | 717465 | T | C |
| Osa04LNT0245900.1 | 4 | 717737 | T | G |
| Osa04LNT0245900.1 | 4 | 717873 | T | G |
| Osa04LNT0245900.1 | 4 | 718101 | A | T |
| Osa04LNT0245900.1 | 4 | 718421 | A | G |
| Osa04LNT0245900.1 | 4 | 718875 | A | G |
| Osa04LNT0245900.1 | 4 | 719700 | G | A |
| Osa04LNT0245900.1 | 4 | 719765 | A | G |
| Osa04LNT0245900.1 | 4 | 719862 | A | G |
| Osa04LNT0245900.1 | 4 | 719865 | C | T |
| Osa04LNT0245900.1 | 4 | 719985 | T | C |
| Osa04LNT0245900.1 | 4 | 720360 | C | A |
| Osa04LNT0245900.1 | 4 | 720449 | C | G |
| Osa04LNT0245900.1 | 4 | 720726 | T | C |
| Osa04LNT0245900.1 | 4 | 720729 | C | T |
| Osa04LNT0245900.1 | 4 | 721279 | A | G |
| Osa04LNT0245900.1 | 4 | 721331 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0245900.1 | osa-miR812r | Cleavage | 4.5 | 20.755 | 1 | 24 |
| Osa04LNT0245900.1 | osa-miR395u | Cleavage | 4.5 | 20.395 | 1 | 21 |
| Osa04LNT0245900.1 | osa-miR160f-5p | Translation | 5.0 | 18.471 | 1 | 21 |
| Osa04LNT0245900.1 | osa-miR3980a-3p | Translation | 4.5 | 16.82 | 1 | 21 |
| Osa04LNT0245900.1 | osa-miR3980b-3p | Translation | 4.5 | 16.82 | 1 | 21 |
| Osa04LNT0245900.1 | osa-miR5495 | Translation | 4.5 | 18.428 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0245900.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | C946 | R1854 |
| Osa04LNT0245900.1 | 4 | qOVA-4 | Resistance or Tolerance | Insect resistance | R1854 | C946 |
| Osa04LNT0245900.1 | 4 | qCTS4-1 | Resistance or Tolerance | Cold tolerance | RM335 | RM261 |
| Osa04LNT0245900.1 | 4 | qSNP-4a | Morphological trait | Panicle/flower | RM401 | RM335 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)