© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0022600.1
AAACATTTAAAGTTGGACCATCGACAATTCCACAAAATTTTATTGAGATAAGTATTGAATAAATATGTTTTGTTCTTTTGGCCTGGAAGGTGCACAAATGAGATGAATCAGAGTTGCATAAACATTGACCAATGAAAGAATGCTATATCTCCTATCAGAAAGATTAATCATCTTTCTGCCCTAGACAGGGTAATCAGCAAATCCAATTTGTGTACAAGAACGAATCGGTGGCTTCTTTCCTTTACAGTGGTGATAATAGTATCTAAAAATTCTGACAAATGATGAAGTTACCAACAAGGCTTTGTGGTTAGTATATTCGCTCAGCAGTGGAGACGGGGCGAAGGAACACAACGATGACAGTGATGTTGTCCTTGCTGCCACGCGCTGCCGCCTCCGTGGCCAGCCGCTTGGAGCACATTCCAGGCTCTTTTACTGTGTCCTTGATGATGGACAGGACATCCTCGTTGCTCATCACGTCCCACAATCCATCACTTGCCATCACCAGGAACTCATCATCAGGTGATAAAATGGTTTCTATAACCTCAGGTTGTGCTGTGACTGCTGGCTTAAGATCATCATCGCCAATGGACCGTGTGACCTGAAGAGCAGCTGCACCAACACGCCATGTATCTATTTGCCATTTGACTTCAGTTCCTTCCTTTACAATCCGTTCTCTTTCCTTTGGACAACTAGCAACATGATCCCTGGTCATAGGAAATGGTTCACCAGCACGGTTCAGAATTGCCCGGCAATCACCAGCATTCGCTACAAAAAGCTTGTTTCTCACTATCAGTGCTGTCACTGCCGTGCAACCAGGATGCCAATTTTTCTGGGTTATCCTTTTTGACTTCTGGTGAAGAATTAATTCCTCTCGAAATGCTATGTCAGTCCTTACAAATGCTTCTGTAAGGGCATCAGTTGGGCTTGTATTGGAATTAAACTGTTTGAGAAAACCAGGGACTGCTCGAACTGAGAACTCAGCAGCTGCTGAACCTCTGTGACCATCAAAAATGCCAAATGCATGCAGATCCTTTTCTTCGCTCATGTGGGGAAGCATAAAATGGGTATCTTCCATTGTTTCTCTTCGACCACATGTTGCAAAAGATCCCCAACTTAATGTTGGACAGTACTTAGAGGACTGATCGAAAATATCAGACCAATGGTCAACTGTACTGTCCAATTTGTTTCCTTTTGCAAACAACTCCCCTTGGTTCAACCAGCTCAATGCTTCTTGATAGTGGTGAACTTCTGTGTTGCCATTTTGACTCTTGTTTGCAGGAGATGCTAGTGAGCAAGAATTTACAGCTATATGCTTTTCAATTATTTTTAACTCTTCAGTTATATCTTTAAATGATGGTCTCTGTTGAGGATCAGAGTCCCAGCATCGCTGGATAAGTGACAAGAGGCTAGGTGGAGCACCAGACTCAGGAAGGGCAAGAGCTGGGCGCAATCCTTGAGAAACAATTGCTGCTGTAAGTTGTTGTTCGGTGTAAGTCATTTCAAGAACGGTGTGTGCCTGTGCTTCTGCTCGTAGGTCTGTATAAGGCACCACACCCGTAAGTAGCTCATTGATAGATATTGCAAAGCTATATACATCTGATTTCTCTGTATGTATGTCCTTTCTCAAAATTTCTGGTGCCATGTATATTAATGTCCCAACCATGTTCTTTTTATGGAAACCACCAGTAGGCTTGCCAGATGATCTCCAGTTTTCAACTGAAACATGCTTGATGTCCTTCTGGTACATGGCTAAGCCAAAATCTGCTAAATGTGGATGGAAGTCCTTATCTATCAAAATGTTTGCAGGCTTTATATCTCTGTGTACTATGCCAAGGATGTTTAGGTATTGGAGAGCCTTTGCTAGATCAGTGGCAATGGTGACCACTTGCTGCACAGAAGGGTTCCACTCCTCAACATGTATCTTGTCCGCAAGGTTTGGAGGTTCAAAGAAATCAAAGAACATCAAGTAATTCGGAGGACGTGCATGTGCTGCGACCAGTCTCGCCAACCCTGGGTGATCCAGTTCACAGAGCAGCTGCAGCTGGTAGTGGAACTTGTCGAGGTCGTCGGAGGTGGACAGCACGGGCTTCTTGGCCGCGACGCGCTCGCCGCCCAGCCGCGCCTCGTACACCGTGCTCTCCGACCCTTTGGCGATGGGGGAGAGGAGGGAGAAGGAGGAGGGCGGGAGGTGGAGCGGGATGGCGGCGCTCCGGCAGCACCCGCGCACGCACCGGTTGGACTCCTCCGGCGGCACCTCCACCCCCATCTTCCTCGCCGCCGCCGCCGCCGCCGCCGCCGCGGGAAGACGAATCGAACACGGCGGTGGCGGAGGAGGCGATCAGGCGGATTCAGAAGGGAAATCGTATGGGCTGTGCCTGTGGACGGGGCAGGGGCGGCGTGGCGAGGAGGCGGCCAAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0022600.1 | 1 | 19966914 | T | C |
| Osa01LNT0022600.1 | 1 | 19963230 | C | T |
| Osa01LNT0022600.1 | 1 | 19963843 | G | T |
| Osa01LNT0022600.1 | 1 | 19963909 | A | T |
| Osa01LNT0022600.1 | 1 | 19964378 | A | G |
| Osa01LNT0022600.1 | 1 | 19964616 | T | A |
| Osa01LNT0022600.1 | 1 | 19966149 | T | C |
| Osa01LNT0022600.1 | 1 | 19966308 | A | G |
| Osa01LNT0022600.1 | 1 | 19967170 | C | T |
| Osa01LNT0022600.1 | 1 | 19967363 | A | G |
| Osa01LNT0022600.1 | 1 | 19967911 | A | T |
| Osa01LNT0022600.1 | 1 | 19968100 | A | T |
| Osa01LNT0022600.1 | 1 | 19968296 | T | C |
| Osa01LNT0022600.1 | 1 | 19968456 | C | A |
| Osa01LNT0022600.1 | 1 | 19968701 | A | G |
| Osa01LNT0022600.1 | 1 | 19968892 | A | T |
| Osa01LNT0022600.1 | 1 | 19963429 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0022600.1 | osa-miR1430 | Cleavage | 5.0 | 16.816 | 1 | 21 |
| Osa01LNT0022600.1 | osa-miR1438 | Cleavage | 4.5 | 14.185 | 1 | 22 |
| Osa01LNT0022600.1 | osa-miR1441 | Cleavage | 4.5 | 16.837 | 1 | 21 |
| Osa01LNT0022600.1 | osa-miR2872 | Translation | 5.0 | 17.051 | 1 | 21 |
| Osa01LNT0022600.1 | osa-miR5523 | Translation | 3.5 | 18.604 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0022600.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0022600.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0022600.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0022600.1 | 1 | qNVB-1-1 | Morphological trait | Culm/leaf | R2159 | C178 |
| Osa01LNT0022600.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0022600.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0022600.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0022600.1 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)