© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0246300.1
CTTGATGCACAACACATCATATCTAAATTATACTAGTACGGAGTTCCAGGTCAACAAAAGGTAAAAGATTTTCAGTTCGACTACGAACCACCCATGAGTACCCATATCTAAATTATATATATAGTACGGAGAAGACAAGTTCTTGCTATCACTGCTAAAGATCTAGAGAGGCAGATGCAAACCCTTCAGCAACCAGCCAACCACCCTTGAGAAAACTCTGTCAATCATAAGCTCTTCTGTTGGCAAGTGGGGATCTTGATCGCCGGACAGGAGATCGGCTTCGATAGCGATCATTAACAGGACTCCTGTCATACGAACCGTACACAGGACTCCTTTGACGACCGTAGTCAGGACTTGGGCGTGACCTGTACACTGGACTAACTGATCGACGATATGGACTATCATCTCGCCTACCATAGCCACCTCTTGCACCATCATACCTGTCACCTCGTTCTGTATCATCCCTGAAGGCATACTCAACAGAAATCACCCTGTCCAACAACTTGGTAGAATGAGTAGCTTCAAGTGCTTTTGTGGCCTCTTCCTGTGTTTCAAACTGCACAAAAGCAAAGTTCCTCCTGATCCGAACATTCGAAAGCTTTCCAAATGGTTCGAAATGCCTTTCGATATCAGTGACTCTGGTGTTGATGGGGTCAAAGTTAATGACAAATAGTGTCTTCGTGGGTTTAGTATTCACAGGTGGTTTGCTATAGCCATCACGCCTGGAACCACGATCACCCCGTGACCACTCCACCGAAAGCCTGCGCCTCCCAGGGCCAAAAGGATAGCCATCAAGGGCTCGTATGGCCTCATCACCATCACGCTCATCCTCAAAGTAGACAAAAGCAAATCCTGCAAAATATCTGATGGTATGAAGAGCACTAGTGTGGTTATTGGTAGATTCCATTGATGGATCAGAGCTAAGCATGATGTTGTAATAACTTATATCCAAAGTAAGACGATACGACTCAGGAGATACTGAGAGTGCTTCACCAATAACAGAACAATCTCACAGGCATTGCTTATTGAGACAGCACGCACAGAACATTGTGATGTTGATGCCGGGAGGATGGCATGGTGATACTGCTAGTCATGGCATGGTATGGAATGATGGAACTGACGGCACGGCATGGATCACATGATGGTGCCAGTCCCCGCTAAACATGCTCGGGCAGTGGTAACAACAGTAAACAGCGCGCGTCATGTAATGGATGGTCAAGTGAAGGGGATGGCCGGATGAGTGCATGGAGGGTGTTTCAGGAGTTGAGTTTTGCCTCTGTAGTTCCTGACTTCATGTCGATGCGGTCGATCCTGCCGTAGCGGTAGAAGAGGCGGTCGAGCTCGGAGTGGCGGGTGTCGTAGTCGAGGTTCCCCACGAACACGGGCCTCATCTTCGCCTTCGCCTTCGCAGCAAATCAAAGATCCCAAGACAGCAAGAACCAGAAAACCCTGCGTCGTGGTCTCGTGGAGCGGAGGACGAAGGGGGAGGCGGCTAGGGCTTTT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0246300.1 | 4 | 1122070 | C | T |
| Osa04LNT0246300.1 | 4 | 1120705 | A | C |
| Osa04LNT0246300.1 | 4 | 1120853 | G | A |
| Osa04LNT0246300.1 | 4 | 1121684 | T | C |
| Osa04LNT0246300.1 | 4 | 1122138 | C | T |
| Osa04LNT0246300.1 | 4 | 1122578 | T | C |
| Osa04LNT0246300.1 | 4 | 1123059 | A | G |
| Osa04LNT0246300.1 | 4 | 1123456 | A | G |
| Osa04LNT0246300.1 | 4 | 1123662 | C | T |
| Osa04LNT0246300.1 | 4 | 1123674 | A | C |
| Osa04LNT0246300.1 | 4 | 1124456 | T | G |
| Osa04LNT0246300.1 | 4 | 1124495 | A | G |
| Osa04LNT0246300.1 | 4 | 1124593 | T | C |
| Osa04LNT0246300.1 | 4 | 1124615 | A | G |
| Osa04LNT0246300.1 | 4 | 1124820 | T | C |
| Osa04LNT0246300.1 | 4 | 1124958 | G | T |
| Osa04LNT0246300.1 | 4 | 1122384 | G | C |
| Osa04LNT0246300.1 | 4 | 1121130 | C | T |
| Osa04LNT0246300.1 | 4 | 1121932 | C | T |
| Osa04LNT0246300.1 | 4 | 1122237 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0246300.1 | osa-miR5795 | Cleavage | 5.0 | 21.455 | 1 | 22 |
| Osa04LNT0246300.1 | osa-miR5814 | Cleavage | 5.0 | 21.185 | 1 | 24 |
| Osa04LNT0246300.1 | osa-miR390-3p | Translation | 4.5 | 21.052 | 1 | 20 |
| Osa04LNT0246300.1 | osa-miR3981-5p | Cleavage | 4.0 | 16.173 | 1 | 21 |
| Osa04LNT0246300.1 | osa-miR408-5p | Translation | 4.0 | 13.801 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0246300.1 | 4 | qOVA-4 | Resistance or Tolerance | Insect resistance | R1854 | C946 |
| Osa04LNT0246300.1 | 4 | qCTS4-1 | Resistance or Tolerance | Cold tolerance | RM335 | RM261 |
| Osa04LNT0246300.1 | 4 | qSNP-4a | Morphological trait | Panicle/flower | RM401 | RM335 |
| Osa04LNT0246300.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | C946 | R1854 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)