© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0246400.1
CATCAAGCCCAGAAATTTCAACAGAAGAACAACTATCACTTTCCCACTTCAAAGTGATGGAATTCTTTGATAAGCCTGTCAGAATGTCAGCAGTAGCCAATTTAATGGCTTCCAACTTTGGAAAGCAAGCTCGTTTACTCTGTAGTAGCTGATGCCCTTCATTAAGACTGTAGCCAAGAATCCAGAACATATACGCCAATGTCACAGCAGGAGCTCTCCCAAGTCCAGCGGTACAGTGTATATATGTTACCCCACCATTATGGTTGACAAGCTTGTGCAGTTTGCTAATCACAGCAGGAAGCCTCAATCGCAAATCAAAAGCATCAAAATCCCTAATTTCGGCACGACAGTGCTCTATATCTTTACATTGTAGACAATATTCTTGAATGGCACAGATGTCAACTCCAAAATATCTGAACTGGTTAAGGATGGAATACAACTATTCACTGAAAGAACACATTGGGCAGCAATGGAAACAACAAGCAACTATGCTGTCAGTATAAAATAGAACTATTTTTATGAGATGTACAATATGCATTGTGCTGAATATCATAGCTGCAGAAGAAGTACAGTAGCAGGGAAGTGAGGAGCAAATGTAATTGTTCAATAGAATTATGGTTATTGTCCAATAGCACAGTAACATAATTAGGAAGAAGGCATGCTGACATAAAAGCACTCCCTATTCCAATAGTTATTTTGATAAAAAGCCATCACCAGAATTTTATAATTCTCTTCGATATAGTTGGTGTGATTCACAGTAAGTGACAGCATACATTTCAAGAATCAAGAGGCTCAAATTCTCTAAACCAGGAGAACTATGGAAAAATGATGTATTATCTATTTAATTATGAGAAATATATTAGTCCAAATCAACATATATGTAGAAAATAAAAAACAATATGAAAGAATTACGGAAATACGTACTAATGTAGTTATCATATATAATACAATGAGAAAAGAAGACCATAGTCAAATGCTTTATTATTGAGCAAAAATGATGGTATTATTTTTATCATCTTTTAGAGGAATCTATCTAAATATAGTTAATCAGCCCGTGTTAGTAGAAGCATGTATCGTCATGCATCAACATATCATGAGATTATTAGTTATAGCTAAGTACACCGGCGTAATCATACTTAGCATATCACGAGACTATCGGGTAATGGACAATTATCTTTAATTGTGCTAGAGAAAAAATATCATACTTAGCATATCACGAGACTATCAGGTAATGGACAATTATCTTTAATTGTGCTAGAAAAAAAAAAGTACTCCCTTCGTCCCATAAAAAACCAACTTAGGACTGGATGTGACACATCCTAGTAAAACGAATCTAGACATGCATATGTTCAGATTTGTTGTACTAGAATGTGCCACACTAGTTCTACATTCGTTTTTTTGGAACAAAAGGAGTAAATTACAATCCATACTATGTATTCTAAAAAATTCTTACAAATTTTCATATAATGTTATCCTTTAACCATTTTCATTTACACAATAGCTAACTTTACATTTTAATTTGGACCACCATATTTTATCCATCTCCAAGTCCGGTGACTCAGTAATCACGTCGCACATTAACTCTCTCTCTCTCTCTCTCTCTCTCCATTTTCTTCTTTCATCTGACAGTTGGATAACCGATAGATCTAGCAAGAAAGAGCCCGGATATAGCGCCTTCGCTCTTCGTCGGGTCAGCTCCTGCCTTCCAAAGTCCCTGCAAGCCCGACATCTCCGACCTCAATTGCAACCATAACAATAGTGTGCATCATGATAGGGGAGGAGAAAAAGACTTGTCGGTTACTAGAGGTTAAGGCTGTGCATGTAAGGCAAAGGGGAGGAACGATGGTGGCTCATGGAGAAAGAGCGGTGATGGCGGTGCGTAGAGTGACAGTTAGCAGTTGCAGGTGGTATGAGGAATTTGTCGTCGACACAATCTTTTAATTTTTTTCCTAAGTATTGATGATACGTGGGTCACCAGTTATATAAAGAAATAGCTTTTAAAATATTAGCTTGCCCTAAAATAAATGTCAAAACTTTTGACCGTCCGTCTTTGAAAAGTTTATGAAAAAATTAAAATAAATTAGTCACACGTAAAATATTATTCATGTTTTATCATCTAATAACAATAAAAATACTAATCATAAAAAATTTTAAATAAAAAAAAAGTTAAACGCCGGACGTAAACCGTAATAAAAAACTACACTTAATTAGGGACGGATGGAGCGGTAAATAAAAATATGGAGATAAGGTTGGAGTATCGCTACTTGAGATAAAGAAAA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0246400.1 | 4 | 1131824 | C | T |
| Osa04LNT0246400.1 | 4 | 1131825 | A | T |
| Osa04LNT0246400.1 | 4 | 1131856 | T | C |
| Osa04LNT0246400.1 | 4 | 1132887 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0246400.1 | osa-miR5541 | Translation | 4.5 | 8.966 | 1 | 21 |
| Osa04LNT0246400.1 | osa-miR812s | Translation | 3.0 | 12.847 | 1 | 24 |
| Osa04LNT0246400.1 | osa-miR169f.2 | Translation | 5.0 | 22.526 | 1 | 21 |
| Osa04LNT0246400.1 | osa-miR812a | Cleavage | 2.5 | 12.332 | 1 | 22 |
| Osa04LNT0246400.1 | osa-miR812b | Cleavage | 2.5 | 12.332 | 1 | 22 |
| Osa04LNT0246400.1 | osa-miR812c | Cleavage | 2.5 | 12.332 | 1 | 22 |
| Osa04LNT0246400.1 | osa-miR812d | Cleavage | 2.5 | 12.332 | 1 | 22 |
| Osa04LNT0246400.1 | osa-miR812e | Cleavage | 2.5 | 12.332 | 1 | 22 |
| Osa04LNT0246400.1 | osa-miR1436 | Cleavage | 4.5 | 9.514 | 1 | 21 |
| Osa04LNT0246400.1 | osa-miR1438 | Translation | 3.5 | 15.472 | 1 | 22 |
| Osa04LNT0246400.1 | osa-miR1438 | Translation | 5.0 | 6.149 | 1 | 22 |
| Osa04LNT0246400.1 | osa-miR1428e-3p | Cleavage | 4.0 | 15.549 | 1 | 21 |
| Osa04LNT0246400.1 | osa-miR1862b | Cleavage | 5.0 | 17.674 | 1 | 24 |
| Osa04LNT0246400.1 | osa-miR1862c | Cleavage | 5.0 | 17.674 | 1 | 24 |
| Osa04LNT0246400.1 | osa-miR1862e | Cleavage | 5.0 | 15.589 | 1 | 24 |
| Osa04LNT0246400.1 | osa-miR1862f | Cleavage | 5.0 | 8.697 | 1 | 20 |
| Osa04LNT0246400.1 | osa-miR1862g | Cleavage | 5.0 | 8.697 | 1 | 20 |
| Osa04LNT0246400.1 | osa-miR1439 | Cleavage | 4.5 | 11.486 | 1 | 21 |
| Osa04LNT0246400.1 | osa-miR1428b | Cleavage | 4.0 | 15.549 | 1 | 21 |
| Osa04LNT0246400.1 | osa-miR1428c | Cleavage | 4.0 | 15.549 | 1 | 21 |
| Osa04LNT0246400.1 | osa-miR1428d | Cleavage | 4.0 | 15.549 | 1 | 21 |
| Osa04LNT0246400.1 | osa-miR1862a | Cleavage | 5.0 | 17.674 | 1 | 24 |
| Osa04LNT0246400.1 | osa-miR1862d | Translation | 4.5 | 17.674 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0246400.1 | 4 | qSNP-4a | Morphological trait | Panicle/flower | RM401 | RM335 |
| Osa04LNT0246400.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | C946 | R1854 |
| Osa04LNT0246400.1 | 4 | qOVA-4 | Resistance or Tolerance | Insect resistance | R1854 | C946 |
| Osa04LNT0246400.1 | 4 | qCTS4-1 | Resistance or Tolerance | Cold tolerance | RM335 | RM261 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)