© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0247500.1
TTTGGACGAAATTTGATTCTAAAATTCCCATTGAACAAAGATATCAAAGTAGAACAGCAGCAACACGAACAAATTCGGTACAATGTATTTGCAGATACTCTATACAACAAATGGCCAAACTGCTCACGAGGCAGCCCTGCTTATGATGCATCTCCACAACACCAACAGAGCTTAAGAGCATTTTTGGTTGAGCAAGTGTCAAGCCCTAAGCATGCCAATTTCAGCTATTCTCTACATCATATTACAGAAGGCTTTGTGAACACAACACGGATGGAATGCACCTAGATAATCCAATTAACCCATTTGCCTCGGGTCTTCTACTGCAGGGATGAACACAATATGTTGCCATTCAAAGCAGCAGACCACCTGCAACTCCACTAGTCCACTGACATTTTTTTAGGATCATGCAAGGAATCATCAACGATTCATGGTGATCGAATTTCACAACGAGCAACGAAGGTTTATTACCCAGGTGGTGCATTAGGATCGCTCCTCCGACCTTGATCTTACAAATCTCCGGCGACTCCTTGGTCTTTGAACATCTTCATCTAGGTTTTCCTCCTCATCGTCCTCGTCCTCGTCTTCATATTGGAGACCTAGTAAGTTCTCTCCCCATAAATAACGGCGCCTCTGCCTTCTCAGGCCCCTCGATGAGCCTCTTATCTCATCTCCTGATCTCATCGGACTACTACTGATCATATGGAACAGAAAGAATGTTGTCAACAAAGATCCACTTGGTTCATTTGGCATGCCTCCTTCCTGGTCAGGTGAAAACATGTCACCCCCTTCAACAACATAATCACCAAACACAACTGCTCCGGGCATAGCCGACCTGATTGCACTTAGTATGTCACCATATTCACGCTGGTGCTCCAGGCGGTGCCATGCACGGCGTCTTGATGGATCCACATCAGCAGGCCTTGTTGTGGGATGGACTCTCCGGGCATGTCTACGGAGCTCCCTGTAGTTGCCAGAAAATGCACATGTTTCCCGCGAGCAAGATCTCGACTTCTCATCCAAATATTCTCTGGCCTCTTTGATGATCTTCCAGCCTTTGACAGTGCCCCTACATAATGGGCATGCCAATTGGTTCAAGCGTGTCAGTTCACTTGACTCCACAGTGCTACTGCTCTCTCTTTGCTGAGCTTCCAAAGTCAAATCTAGATCTTGATTATAGCTATTTTCTCCCTGCTGTCCAGATAGGCCAGCAGAGCTTTGGATAGCATCTCGATGATTGAAAATTTCATGGGATTCAGATATGCCTGTTTGGATTTCTCCAGTGGGATCAAAATGAGATCTCTGGGGTACATTTTGGCTACTTATGTCCCTAGGCAACGATGAACTTTGCTGTGACGAACCGTCATTGTGGTCTACTTTCATTTTCTTGAACCTGTCTAGGCAATTCGAATGTCTATAGCTTGTATCGCATATATAGGATCTGCATCCTTTGTCATGGGAACTGCACAGCAGAAGAACAGCATTGTGGGGATGATCCATGCAAATTGGGCACAATGCATCGTCCCATTCCTTGTGCAGGGCAGCAATATTTGCATCTGCAGTTGGCATCTTGAACAAACTGCTCTCTGCATTTGGCATCTTCAATAAGCTTGTTCAAGGATCACTGAAACCTGCAATACAGTTCAACTTGTTGGAGCTGCCACGCGACGCCAGCGAGCGCAATCCTGGGATTTCCTCAAGCCCAGCGGCGGGGAGCAGCAGCAGGGCGACGAACGACTGCGGCGCTGCTCTGCTCTACTCGCGGGATGGATGGGGATCGGCGATGGCGGCGAACTCGCGAGGAGTCGGAGTCCACGGCGAGCGGACGGGGGATTTCCTCAATCTTTTCTTCTTAGGCACAAAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0247500.1 | 4 | 1848915 | A | G |
| Osa04LNT0247500.1 | 4 | 1848932 | C | G |
| Osa04LNT0247500.1 | 4 | 1849242 | A | G |
| Osa04LNT0247500.1 | 4 | 1851028 | C | A |
| Osa04LNT0247500.1 | 4 | 1851268 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0247500.1 | osa-miR417 | Cleavage | 4.0 | 11.858 | 1 | 21 |
| Osa04LNT0247500.1 | osa-miR390-5p | Translation | 4.0 | 14.941 | 1 | 21 |
| Osa04LNT0247500.1 | osa-miR2098-3p | Translation | 4.5 | 19.126 | 1 | 20 |
| Osa04LNT0247500.1 | osa-miR2873a | Translation | 4.5 | 11.19 | 1 | 24 |
| Osa04LNT0247500.1 | osa-miR2928 | Translation | 4.5 | 13.841 | 1 | 20 |
| Osa04LNT0247500.1 | osa-miR2931 | Translation | 4.0 | 19.586 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0247500.1 | 4 | spp4-2 | Morphological trait | Panicle/flower | RG449 | CDO456 |
| Osa04LNT0247500.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | C946 | R1854 |
| Osa04LNT0247500.1 | 4 | qOVA-4 | Resistance or Tolerance | Insect resistance | R1854 | C946 |
| Osa04LNT0247500.1 | 4 | qCTS4-1 | Resistance or Tolerance | Cold tolerance | RM335 | RM261 |
| Osa04LNT0247500.1 | 4 | qSNP-4a | Morphological trait | Panicle/flower | RM401 | RM335 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)