© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0248100.1
ATCTATTTAAACATTTTTAATTTATAGTCTTCATAATACAAATAACAAACAATAGGCCGTGTAACACACGGGTTAACGATAGGCTGTGTTACTAGGCATTAGGTTCCAAGCTCGCCAGTTTCATCTCTGGCATCACCGGGGATGCGAAATATGCCAGCGTGTTCGTTGAGTATCCAGACAATTGTTGTGAGCTCGCCTCCACAGGCGAGCTGCTTGGCATGAGAATCCCTTGTGCATCGGACGGACGCATACATCAGAATACGAACCCATGCCTTGAAGATATAGTCCAGCATTACCGAGATATCAAACGCAACCTGTTCTCACAATATGAGGAATCATCTTTTAATCCTTTCATATCTCTCAGGGCTAATTTCGATATGTGCGGTTATATGTGGGCTGTCTACCCAAGCTCTACTTAGCAGCACCTCGGCGAATTTAGCTCCATCAGACAGAATTATATTCTCGTCATAAAGAACACTTGCCTTTGCTGGCCTTGACTTGTGATTACTATAACCTGGCCTCCAGTTGCTTACCTTCTTTGGAGCGTTTGAGATTTGGACCTGCTTCTCCTTCTCCATTTCTATTAGCCTGTCGGCCAGCTTCTCCTTTCTCTCTATCAAGCTACCAGAATATCCTTCTTTGAGCAATATTTCCACAAGAGCCTTGTGAGTTTCTTTGTACAGGCTGCGTAGCTTAAGGCCTGGTAGCATGCTTGGGCGGACCGCTACGAGGAACGCCATGTAATTCGACAGCGCCATGATCACCTGTACTTGCTTGGAGTTGGACGGTGATGCAAATTGACGACTGACCAAGAGGAAGATGTCCGTGGCGATGTGCCAGATAAGGATTGTCTCTTGGAATGCATGAGCAAAGTTCATAGCTTCATCAAGCTCCCGGTTCTTCCATGCACTCCCGGCATATCCCAGACTGCTGCAAGAGAGTAAATTAGTCTTCTCAACAGTCGCAGCTGGATATGCTGTCTTGAGTTGCTCCCATATCTGTTGGAACAACAATTCCCTTACCTCCGATGAAATTGCAAGACCCCTTGCGTCATGGTATTGGTACTCCATCCAACTGTCATCTGATACAACCTTCTTCAGCAGCGAGCCAAACATGCCGATCGTGCCATGAGTGCACTCATGCAATAAGTTGTACTGCCCAACGGTTCCTGACCACATCCTGTACCTAGTTGGTTCCTTGCCGAGCAGCCGGCATGGATCCAGACAGAGGACAAGACGACGGAGCAGGCGCCACCTCCCGGAGCTCAAGCATGCGGCATGAAACCAGCAATCTGGCCTATTGTTCAGGAACGAATAGGTCCATGTAGACACCATCGCCCTGAGAAGCCATCTGACATCCAGGATGATGGTGCCGACCATCAAGATGTAGGTGATGAGCACATCTGCCCTCCTCTGCTCATCTTTACCTTGGAACCAGAACAGCAGGAACGCGGTGGCACTGACGACCGGCGACGCCAAACGGATGATGTAGCCGAACCATGTGTGCACCACAGCTACCTTGGTGTAGAGGATGTCGTACATGAGGGACAGCTCCATCTCCACCACCCTGCACATCTCCTCCCATCCATGACCAAATATTTGTGATCGTGCCGCATCACTTTTCAGGGGATTCTCGTCGTCTGAATGATCGATGAAGGCACCCTTGGTGATATGGAGCAGGCCATGAGCAACCAGCAAGGTTCTCTCGTTACCCACCTCTTTAACATCTCCGAAGCTTCGTTTTCCTAACTTGCACTTCTTGTTTGAGCTTCTCATCTTTCCCAGGTTGGCCTGCCTAATCGCCACGGCCCTCTCCACGTACTTGGCAATGCCGATGGCGAACATGACGACAGAGACCCACAGCAAGGCGCTACCGCCGCCGTCACGGTTGTATATCTGCTTGTACAGGACATATGATGCTCCCAAGATCTGTACTGTGACGGTGAGCACCTGTCTCCCGGCGAGAACCGTGTCCTCAAGGGAGTAGGCGGTGATGTTGTCGGGGCCAGCAAGATGCAGGAGCAGGAACGGTGCCCAGAATGCCAGCTGCTGTTGCTGCTGCTGCGTTGTGCGGCCGAGCGACATGCTGCCGAGAGCATACGTCCCAGCCCAGCCGCCAAGCTGGTACGCCAGCCATAGGACAAGTGCCCGCACGCCGGTGGCTTTACGCCGACGGATTCCGGCAAACAGCGTGAGGACGAGGTGGGCGGCGAAGCTGCAGAGCACCACGATGCGGATCGCCCAATCGTTGACAAACAGGGACGTCTGGTTCAGCCAGCCGGCCTGAAGTGAAATAGTCAAGTGGGAGCAGCTACTTCATGCCTTCATGCTTTATTCGCCGTGTACTATAAACAAACCCTATGTGGATTTGGTTGAGGCTCCTCCCCACACCCAATATCCCTCTATCAATCCGCTTCCACCTGTTTGGTTAATCCCTGTGAGGGAAGGATTGGAGGGGATTTACTCAATCCCCTCCAATTCTCTTCAATCTCCTCTAAACCGAACAAGTCCTAAGTATTGTATTTGTTTGGAGGGGATTGGTCATATTCCAGAAAACATTGTCAGGCTTCATGGGCTGGCGATGACAATTTGTCTCTCCCGCGTTCTAGAACGAAGAATCTCATGTAGGTAAAGAGATCACATAAGTTGCACTTCTCTTCCTCCAATAGCTTCCTCACCTTGAGTGAATCGAGCTCAATCTCGCTCGGACACCAGCCGAGATGCAGGTCGAGGGCGCTGTCGCCAGATTCGTCCACCGCCGCTCGGCTAGTGGTCCCCATCATGTGCGTCGTCGGCCCAGGAATCCCAGCCGCCAGATCCGCCTCTCCTTCGTCTCACCCCCACCCTCCGCCTCCGCCTCCGCCTCCGCCGCGGCCCTCGGCCACCGCTCCCATCTCCCCGGAGCTCACTGCCTCGGCGCCTCCATCTGTCGCGTGTCGCCGTGGGATGTGGCGCCGGCGACCTCCGTCCTCGGGCAGATCCGGTGCCCAATAGGCCATGACGCTGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0248100.1 | 4 | 3610593 | A | T |
| Osa04LNT0248100.1 | 4 | 3611581 | T | C |
| Osa04LNT0248100.1 | 4 | 3610192 | G | A |
| Osa04LNT0248100.1 | 4 | 3610266 | G | A |
| Osa04LNT0248100.1 | 4 | 3610978 | A | G |
| Osa04LNT0248100.1 | 4 | 3610992 | T | C |
| Osa04LNT0248100.1 | 4 | 3611209 | A | G |
| Osa04LNT0248100.1 | 4 | 3611220 | A | G |
| Osa04LNT0248100.1 | 4 | 3611628 | T | G |
| Osa04LNT0248100.1 | 4 | 3611808 | C | G |
| Osa04LNT0248100.1 | 4 | 3611972 | C | T |
| Osa04LNT0248100.1 | 4 | 3611984 | A | C |
| Osa04LNT0248100.1 | 4 | 3612018 | A | C |
| Osa04LNT0248100.1 | 4 | 3612266 | G | A |
| Osa04LNT0248100.1 | 4 | 3612490 | T | C |
| Osa04LNT0248100.1 | 4 | 3612696 | A | T |
| Osa04LNT0248100.1 | 4 | 3612791 | A | T |
| Osa04LNT0248100.1 | 4 | 3613220 | A | T |
| Osa04LNT0248100.1 | 4 | 3613447 | G | C |
| Osa04LNT0248100.1 | 4 | 3613537 | T | C |
| Osa04LNT0248100.1 | 4 | 3611069 | T | A |
| Osa04LNT0248100.1 | 4 | 3612501 | C | T |
| Osa04LNT0248100.1 | 4 | 3612530 | T | C |
| Osa04LNT0248100.1 | 4 | 3612541 | G | C |
| Osa04LNT0248100.1 | 4 | 3612569 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0248100.1 | osa-miR6253 | Cleavage | 4.5 | 19.198 | 1 | 22 |
| Osa04LNT0248100.1 | osa-miR6255 | Cleavage | 4.0 | 15.248 | 1 | 22 |
| Osa04LNT0248100.1 | osa-miR167a-3p | Cleavage | 5.0 | 22.859 | 1 | 22 |
| Osa04LNT0248100.1 | osa-miR171c-5p | Translation | 4.5 | 23.359 | 1 | 21 |
| Osa04LNT0248100.1 | osa-miR419 | Translation | 5.0 | 22.03 | 1 | 21 |
| Osa04LNT0248100.1 | osa-miR818a | Cleavage | 4.5 | 11.144 | 1 | 22 |
| Osa04LNT0248100.1 | osa-miR818b | Cleavage | 4.5 | 11.144 | 1 | 22 |
| Osa04LNT0248100.1 | osa-miR818c | Cleavage | 4.5 | 11.144 | 1 | 22 |
| Osa04LNT0248100.1 | osa-miR818d | Cleavage | 4.5 | 11.144 | 1 | 22 |
| Osa04LNT0248100.1 | osa-miR818e | Cleavage | 4.5 | 11.144 | 1 | 22 |
| Osa04LNT0248100.1 | osa-miR1863c | Translation | 5.0 | 20.076 | 1 | 24 |
| Osa04LNT0248100.1 | osa-miR5510 | Translation | 5.0 | 24.019 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0248100.1 | 4 | qOVA-4 | Resistance or Tolerance | Insect resistance | R1854 | C946 |
| Osa04LNT0248100.1 | 4 | qCTS4-1 | Resistance or Tolerance | Cold tolerance | RM335 | RM261 |
| Osa04LNT0248100.1 | 4 | qSNP-4a | Morphological trait | Panicle/flower | RM401 | RM335 |
| Osa04LNT0248100.1 | 4 | spp4-2 | Morphological trait | Panicle/flower | RG449 | CDO456 |
| Osa04LNT0248100.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | C946 | R1854 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)