© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0248700.1
CTCTTTCCAAATATCCCACAACACAAAGATGAATTAGATCGGATACCTTTTCTTTGTGTTGCTCATCCGGCCCATTCGACTGTCCGCACTAGTTTCAATTAGTGATCTGTTCCCTGATACAGCGGCTGAAAGAAAATTCTGCCCAATTCTTTTGCCAAATCCCTGCTCCAACTGCTAGCGAGTATGAGAAATCTTTCAAAAGGTGTTGCATCGTCCCCATGTTCCAAAACATAAATATCAAACACAATAGTTCTTGTTCGGTCATCCTCGACTTTGTAGTCACTCTGAAATCCATAGCCGATTGTAGTACAGCAGCCAAGCAAAGAATCTTTGGTTAGATTGTCCTAGGTTTCCCAAACGGTTTATCATTTTCCTTGGACTAAATGCCATATTACACAAGGGTGGGGTTTGTAGTATCTAACTCTAAGGTGCTTAGCCAGCTTCTATCACTATGAACTGGCGTTGATACATGTTGCGGCTTAAAAACCAGTGCTAATTATAAATATTAGTGCCAATACGTTCTTAGTTATAACTGGCACTAATGGACAAGACTACATCATGCCAGATAAAAAACTACAAAATGGTCTTAGCTACTTATTTTATTGTATCTACCTCATATAGAAGGAGTAATAATCGTGGTTTTGCTTTCATACAAAACGGTCTTAGCTACCTAATTTAATACATCCGCCTCATATAGATGAAGTAGTAATCGTGGTTTTGCTTGCATAAATAATGGTTTAGACAATTGCAGGCTTGTAGCTGACTCTTGAAGCTCAATCCTGTCACCACCTGGTGGTATGCTCCAACTGAACCCCTGCAGAAGCCTTGCAAATAGCATCATTGTAATTGATGTTCCGAGTGACACGGCAGGACAGCCACGCCTACCAGCACTGAACGATACAAAACGTAACTCTGGCTCAGCTAGCACCACAGTACCAGTATTTTTCAGATGTCGCTCTGGTTGGAATTCGAGTGGTTTATCCCATGCTCTAGGGTTTCGACCGAGCCCAATTCGGCTTAACATGACATGGCTACCCTTTGGGATCATGTATCCCGCGACGGTGGTGTCTGCGATCGCGACATGGGGTGGGTTGAATGGGTGGTAGGGGTGGAGGCGGAACGCCTCCCGGATACATGCCTTGAGGTATGTGAGGTTGTGAATGTCGGATTCCTCAACAAGCCTTTCTCTACCAACAACCATATCGAGTTCATCCACTGCTTTCTTCATGACCTTTGGATTGTTCACCATCTCTGCCAGTGCCCACTCTACAGCATTTGATGGGTTGTCCACGGTAGCAAGGATTATTTCCAGCGTTTCTGCCTTGATCTCATCTACTGACAAAAACGGTTTCCCTTGTGCATCCTCCAAGGAGATCAACACGTCCAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0248700.1 | 4 | 5040915 | G | A |
| Osa04LNT0248700.1 | 4 | 5041021 | C | G |
| Osa04LNT0248700.1 | 4 | 5041245 | T | C |
| Osa04LNT0248700.1 | 4 | 5041558 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0248700.1 | osa-miR5814 | Cleavage | 5.0 | 13.972 | 1 | 24 |
| Osa04LNT0248700.1 | osa-miR1861o | Cleavage | 5.0 | 12.514 | 1 | 22 |
| Osa04LNT0248700.1 | osa-miR395d | Cleavage | 5.0 | 16.812 | 1 | 21 |
| Osa04LNT0248700.1 | osa-miR395e | Cleavage | 5.0 | 16.812 | 1 | 21 |
| Osa04LNT0248700.1 | osa-miR395h | Cleavage | 5.0 | 16.812 | 1 | 21 |
| Osa04LNT0248700.1 | osa-miR395k | Cleavage | 5.0 | 16.812 | 1 | 21 |
| Osa04LNT0248700.1 | osa-miR169d | Cleavage | 5.0 | 16.989 | 1 | 21 |
| Osa04LNT0248700.1 | osa-miR169d | Cleavage | 5.0 | 17.787 | 1 | 21 |
| Osa04LNT0248700.1 | osa-miR169h | Cleavage | 5.0 | 17.787 | 1 | 21 |
| Osa04LNT0248700.1 | osa-miR169i-5p.1 | Cleavage | 5.0 | 17.787 | 1 | 21 |
| Osa04LNT0248700.1 | osa-miR169j | Cleavage | 5.0 | 17.787 | 1 | 21 |
| Osa04LNT0248700.1 | osa-miR169k | Cleavage | 5.0 | 17.787 | 1 | 21 |
| Osa04LNT0248700.1 | osa-miR169l | Cleavage | 5.0 | 17.787 | 1 | 21 |
| Osa04LNT0248700.1 | osa-miR169m | Cleavage | 5.0 | 17.787 | 1 | 21 |
| Osa04LNT0248700.1 | osa-miR395m | Cleavage | 5.0 | 16.812 | 1 | 21 |
| Osa04LNT0248700.1 | osa-miR395p | Cleavage | 5.0 | 16.812 | 1 | 21 |
| Osa04LNT0248700.1 | osa-miR395r | Cleavage | 5.0 | 16.812 | 1 | 21 |
| Osa04LNT0248700.1 | osa-miR169r-5p | Cleavage | 4.0 | 17.787 | 1 | 21 |
| Osa04LNT0248700.1 | osa-miR1857-5p | Cleavage | 4.0 | 12.845 | 1 | 21 |
| Osa04LNT0248700.1 | osa-miR1861a | Cleavage | 5.0 | 12.514 | 1 | 22 |
| Osa04LNT0248700.1 | osa-miR1319a | Cleavage | 5.0 | 23.128 | 1 | 24 |
| Osa04LNT0248700.1 | osa-miR5148a | Translation | 3.5 | 21.534 | 1 | 24 |
| Osa04LNT0248700.1 | osa-miR5148b | Translation | 3.5 | 21.534 | 1 | 24 |
| Osa04LNT0248700.1 | osa-miR5148c | Translation | 3.5 | 21.534 | 1 | 24 |
| Osa04LNT0248700.1 | osa-miR5494 | Cleavage | 5.0 | 9.758 | 1 | 21 |
| Osa04LNT0248700.1 | osa-miR5507 | Cleavage | 4.5 | 15.395 | 1 | 21 |
| Osa04LNT0248700.1 | osa-miR5519 | Translation | 5.0 | 14.42 | 1 | 21 |
| Osa04LNT0248700.1 | osa-miR395b | Cleavage | 5.0 | 16.812 | 1 | 21 |
| Osa04LNT0248700.1 | osa-miR395g | Cleavage | 5.0 | 16.812 | 1 | 21 |
| Osa04LNT0248700.1 | osa-miR395i | Cleavage | 5.0 | 16.812 | 1 | 21 |
| Osa04LNT0248700.1 | osa-miR395j | Cleavage | 5.0 | 16.812 | 1 | 21 |
| Osa04LNT0248700.1 | osa-miR395l | Cleavage | 5.0 | 16.812 | 1 | 21 |
| Osa04LNT0248700.1 | osa-miR395s | Cleavage | 5.0 | 16.812 | 1 | 21 |
| Osa04LNT0248700.1 | osa-miR395t | Cleavage | 4.5 | 16.812 | 1 | 21 |
| Osa04LNT0248700.1 | osa-miR395n | Cleavage | 5.0 | 16.812 | 1 | 21 |
| Osa04LNT0248700.1 | osa-miR395q | Cleavage | 5.0 | 16.812 | 1 | 21 |
| Osa04LNT0248700.1 | osa-miR395y | Cleavage | 5.0 | 16.812 | 1 | 21 |
| Osa04LNT0248700.1 | osa-miR395f | Cleavage | 4.0 | 16.812 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0248700.1 | 4 | qCTS4-1 | Resistance or Tolerance | Cold tolerance | RM335 | RM261 |
| Osa04LNT0248700.1 | 4 | qSNP-4a | Morphological trait | Panicle/flower | RM401 | RM335 |
| Osa04LNT0248700.1 | 4 | spp4-2 | Morphological trait | Panicle/flower | RG449 | CDO456 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)