© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0248800.1
ATCCAAAACGTGTAAAACTTCTTCAATCATCTATGCATTCCTTACACTCGGTCTCTTTTCTTTCGCCCAAACAAGTACCTCAACTCAAAGTGCACCAGACTGCATCGGATTAAAATTGCGAGTTGGGCTTCCTGCACGGCTTCGTCCTGGAAGATTCTCCACTTGGTAAGTCAGTAACTCAGATTACGTTCAGCCTCTTTCTCTTTTCATTTTCCTAATGGCAGCCGCGATCTTTCATGTAGGAACATTCCCTCTTAGCATCCTGTAAGTTGACTTCTGTTAAGCGTTGATGTGGACTTCTTATTACAGTGAATAATATTTGCCTGCTTTGTTCAGTGAATTGACCTTAGTGGGTGCTGAATCAGGAGATCCTACCTAACTGAATCTGCAATAAGAAACCCGATCGCAAGGAACTGTAGTCACAAGAATTCTTGGCTACTGCCATCTGTATCCTCCTCTTAACAGCAGTAGTACAGGAGTGAGCATACCGATTATGTAAACTCAGTTAAGCATGAATGAAATGGAGAACACGTAAAGCACAATATATCCTTTCCTGTTCTCATATCTTCCTTAACTGTATGCCTTTTTTAGTAACAACAAATCCCATATTTTGTGCATGGCCTTTTTGAGAATATTTTTTTCTGACTTTACATAAAACATTGCTCTTCATATAAGCATGTGCAATAAAGAAATGGACTATAAGCATAGGAAGGAATGTGCAGGCTCCTAGTACTAGGGCACAACACAATCATAGGCCTATAATTTGCAGTTGAGAAAGCAAGATCAGGTGGCTAATGACCCAATCTGATGAAATAGATTCATCTAGCTTGCTGCAGCCTCAAACCTCTGATGCTAGCTAAGATAGAGACAAGAATGACATATACATCACATATTTTGGCTTGAGCTGCCCCCCACATTACCCATCCCAATCATTAAAAAACAAAAAGGAGAATGGCATATGGTTCTTACTGTTTGTAGTGGGGCTATCACAGTAGAACCCCAGAGGCAAACCTTTTTCTTAAATAAAAAAGAGATGCAAACGTTTTTCATTAGAGGTCAGTTTTAGTTGACTTTTGATTTTCTCTACCCCCATCTTTATTTTGTATTGTTGAGAAGGTATCAACTGTGCTCCATATTACAAAAGCATCAAGCATACTGGCAAAGGTACCCGCCTTTATTGGCAAGTAAACCTAGAGAAAAGCACACTCACCTCAAATGAGGAAAAAAAAGATTATAGTTTCCATACTGGTTTAGTAGCATTCATTCACATAGCTAAACATGTAAACAGGACCAATTTCACTAGGAAATATTGTATCATGGCTGAGACAATTTCTTTTTACACAAAATCAGGAACATTTCTGATTTGTATTTCACCACTGTACTCTTCTTATTGATGTGGGGAGTATTTCCTTTTTTACAAAAGAAAAAGAATCAGATGGTGTTCCTAATAAGCGCCTAGACTAATTCAAGGGTTTGCATTTAGCAGTTGATTTAACTGTAGCAGCAACACGGTAAGAACATTTGTTGCAAGTTAGTATCTGTACCTTCATGAAGAGTGCACCACGTTCATGCTGCAACCTGCAAGTGGACTTTCATTTCTACCTGATTTGGTTCCCATATCCATGTTGATTTGGTGTCGACACCTGATAGATATTTCTATCGATGTAATTGTGATGGTATACCGACACAAGTTGTGGTATATAATTCTTCCTGCTTTGCTTTCTCCTAATCTTAGTGCAACGATGCACAATTCTTCTATGTATTCCCAAAAAACAATTCTTTCTGCTTTTTCTTCCGCGTCGAATTTCCTCCATTGGAATAAGTTTTCTGTCTTTCTGAAAGTCCACGGATTTATGCACGATACCTCTAGCAATAACTTATCAGTTCCATCTAGCAGTAACTGGAAACTAGATGTCAAAAGAAAAGCTCAATGGCCGGACAATAAGTTTGTTTATGATTATTCCTTGCATTTTATCTAAGGTTGTCCCATACGGAGTTGCACCAATTTGTGGGCAGAAGGCAGTGGGCATTAGTACTCCATGCAATAAGCATAGAAATGCTTGGTGGACACAAAATGAGATTAAAAAAGACAGGAAACAACATTTATATATTATGGTTCCCTCTCCACTGCCAAAGATGCATCATGATAAATCTGTGTGCAATATAAATCGATCGCCTTAGTTTGCTTGCATGGGAACTTTAGGCATCTGTCACCATGTGTGTATCTCTGTGTGCAAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0248800.1 | 4 | 5116362 | T | A |
| Osa04LNT0248800.1 | 4 | 5116687 | C | T |
| Osa04LNT0248800.1 | 4 | 5116806 | A | G |
| Osa04LNT0248800.1 | 4 | 5117189 | A | G |
| Osa04LNT0248800.1 | 4 | 5117516 | G | T |
| Osa04LNT0248800.1 | 4 | 5118148 | A | G |
| Osa04LNT0248800.1 | 4 | 5118213 | A | G |
| Osa04LNT0248800.1 | 4 | 5118275 | A | G |
| Osa04LNT0248800.1 | 4 | 5118451 | G | A |
| Osa04LNT0248800.1 | 4 | 5118497 | G | A |
| Osa04LNT0248800.1 | 4 | 5118944 | A | C |
| Osa04LNT0248800.1 | 4 | 5119175 | T | G |
| Osa04LNT0248800.1 | 4 | 5120205 | A | G |
| Osa04LNT0248800.1 | 4 | 5120246 | A | G |
| Osa04LNT0248800.1 | 4 | 5120311 | T | C |
| Osa04LNT0248800.1 | 4 | 5119547 | C | G |
| Osa04LNT0248800.1 | 4 | 5116201 | A | G |
| Osa04LNT0248800.1 | 4 | 5118782 | A | G |
| Osa04LNT0248800.1 | 4 | 5119453 | A | G |
| Osa04LNT0248800.1 | 4 | 5116735 | C | T |
| Osa04LNT0248800.1 | 4 | 5116789 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0248800.1 | osa-miR160a-3p | Cleavage | 5.0 | 20.885 | 1 | 21 |
| Osa04LNT0248800.1 | osa-miR160b-3p | Cleavage | 5.0 | 20.885 | 1 | 21 |
| Osa04LNT0248800.1 | osa-miR160c-3p | Cleavage | 5.0 | 20.885 | 1 | 21 |
| Osa04LNT0248800.1 | osa-miR166a-5p | Cleavage | 5.0 | 17.879 | 1 | 21 |
| Osa04LNT0248800.1 | osa-miR166e-5p | Cleavage | 5.0 | 17.879 | 1 | 21 |
| Osa04LNT0248800.1 | osa-miR528-5p | Translation | 5.0 | 11.453 | 1 | 21 |
| Osa04LNT0248800.1 | osa-miR1429-3p | Translation | 4.0 | 9.369 | 1 | 21 |
| Osa04LNT0248800.1 | osa-miR812g | Translation | 4.5 | 21.746 | 1 | 24 |
| Osa04LNT0248800.1 | osa-miR812h | Translation | 4.5 | 21.746 | 1 | 24 |
| Osa04LNT0248800.1 | osa-miR812i | Translation | 4.5 | 21.746 | 1 | 24 |
| Osa04LNT0248800.1 | osa-miR812j | Translation | 4.5 | 21.746 | 1 | 24 |
| Osa04LNT0248800.1 | osa-miR2868 | Cleavage | 4.0 | 15.451 | 1 | 20 |
| Osa04LNT0248800.1 | osa-miR5144-3p | Cleavage | 4.5 | 15.218 | 1 | 21 |
| Osa04LNT0248800.1 | osa-miR5486 | Cleavage | 4.0 | 19.725 | 1 | 21 |
| Osa04LNT0248800.1 | osa-miR5502 | Translation | 5.0 | 15.596 | 1 | 22 |
| Osa04LNT0248800.1 | osa-miR528-5p | Cleavage | 5.0 | 11.835 | 1 | 21 |
| Osa04LNT0248800.1 | osa-miR5339 | Cleavage | 5.0 | 11.111 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0248800.1 | 4 | qSNP-4a | Morphological trait | Panicle/flower | RM401 | RM335 |
| Osa04LNT0248800.1 | 4 | spp4-2 | Morphological trait | Panicle/flower | RG449 | CDO456 |
| Osa04LNT0248800.1 | 4 | qCTS4-1 | Resistance or Tolerance | Cold tolerance | RM335 | RM261 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)