© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0022800.1
TCCTCCCCTCGCTTTGTGCCATCGTCGCCTCACCCTCCTCCTATTGTCGTTGCGCCGGCGCCGCCCTCCTTGCCAGTGGATCCAGCCATCCGGAGGAAGGAAGGGTCACGAGGCCATCAAGCCATCGCTGCCCTCTTCTCCCCTCTCATCTCCAGACCACTACCGCCTTCCTCTTCCTCTCCCTATCCTCGGTGAGCTACAGATCCGGTTTGGGGTCATTGGAATCGATGGTCTCGGCCTCCCCACTGGTGGATCCGATCACTGGAATCATCGGTGAGCTACAGGTCCGGTTTGGGGGTCAGCGGAATTGATGGTCTCGGCATCCCCACTGGTTGATCCGATCACTGGAGTCACTTGCGGCCATTGGTTTCCTTTCTGGTGAATCCTTTTGATACCCTTTCAGCCACAATCGTTTTGTGCATACATTTAGCACAAAATCCACAAGGTAAGGCAATGGTTTTGACTCGCCATTGAGCATTTGCATTGCGTTTGCTGGTGTTTTTACATAATCCCCCATCTTGCCTTAGGTTCTGTGGAGAAACTGATGGGCTAGGATGAGGTGTAGGTCACAGATTACAGAGAAGACGACTTCCATGCTGCGCATCTACCGTCATGCTGAGCAAGCTATCTTGCTTTCTCCTCTCTTAAGCAGGGCTGCGAGATTTAGATTATGTTGAGTTTTTCTTGAGTTCAGATTATTTCATATGAATTTAGCTATCAGAAGTTCCATGGTTATTGGTTTTGTTGCTGCATTGTATGACACCCCTTGATAGAATGACATCAGGAAGAAAAAAGAAAACCATGCTAGGTATTACTACAAGGCTATAAGTATAAAGATTATATGTTATATGAGAGCATTCTACAAACAGGATATGCAATGGAAGGATATTCTTTTTATTAGCAGTGCTTAGGTACCAGCCAATAGCCCAGTACTGACATCAAAAGCCCTAGCTCTGATACTGGGAGCATAACACTTCGATAGACGTTCAACAAAGAAAGTTGGTAATTAAGATCATGGACGAAATGAAGCTTATGGTTGTTTTTTCATTGCTTGGTGGTGTTTCAGACAACTCAACCTGCTGCCACATATCCATAAACAAAACATTCCGACAGGTAGTTATTTAATACTATCCTACAAACTTACATTCTGCCAAAAAAAAAAAACTTTCAGCATGCCTGATATTTTTATAATTTAATGTGTAAATGTTGAAGAGTGCAAGCATCTAATTTTCTCCTCTGCCTTGACACAAGAGTTTAGGCCTCTAGAATGTCCTAGCAGCACTGAAAATACTCTATGCATATAAATTTTCTATGTTGCAAGTCACCAGTTATGCCAGTTTGCTTCTGGTTATGTCCACAACATATTCAATGTTGCAAAATAAGTATAATGCAGCTATGCTTCAGGTTACAGCTTCCAATCTGCATCTTTTAATATTACATTTAACTATTTCATTTTGTCAACATCGTTTAAACTGTTTTTTTCCCTTTTCCTAAGTAGTGAGTTGATACTATTCCAGTTGGGTAATCACATATGCGTCGTGCCTACTTCTACATTTGATTATTAGACCATGGTTTGAAATGCTATTTACTTGCTTACTTCTACATTTAAATTATCAGGAATTGTGTTCAGGTTTGTATAATTTAAGGTTCGCGTAATTTAATGCACCTCAAAATTTAGGTATTTTCTTCTAAAAATAACATTCTGCCAAGTCAGGGATTTGGGATGGTAGTTTGCAGTTTGCTCATGTCCATACTCACTATTGTATCTTTACCCTTTACACAAAGTTCCATTATCACATAGTACTATGCGCAATACAATTAATTGCCTACATTTTGCTTTGTACTTCCTCCGTCCCATAAAAAACCAAATCCTAGGATGAATATGGACATAGTGTTTTTATGAGACGGAGGGAGTATAAATTAAGACTATCATTTTACTGCAGTTAGCCTGCATTCAGATTTAAAGATTTAACACCAAATCTTTCGTGTGCACCCGCATACCACATTCTGACATGTCAGATCATTAACACTGTCAATTGTTTTACTTCATTTTTTCTGCAAATAATATTGTGTTAATAAAATGTTTTTGTGTAATAGAGTTAATAAAATGTTAACCTTCAAAATAATACATAATAATTGTATATGGTGTAGATTAATTGATATTTTGCCTTTGCAGATACAACCAAAAGAGATTATGGAGGATAAGATATCTTTATTTGTTTTTGGCAAAAGATGCAGTTGAGCTCAACTACATTATCTCCTCTGCAATAATTGTTTTTAGTACCATCCTGTATTCCAAGCATCCGTCCAATGTCATAGATGTTAGTATTGTACTATTGGTAAGTGAGAATTACCCAAGCCTTATTTTGTTGGCCTACGAATTACTTATATATATGACATTGTTGAAGCTGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0022800.1 | 1 | 20197590 | A | G |
| Osa01LNT0022800.1 | 1 | 20198887 | A | T |
| Osa01LNT0022800.1 | 1 | 20199270 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0022800.1 | osa-miR5814 | Cleavage | 5.0 | 15.143 | 1 | 24 |
| Osa01LNT0022800.1 | osa-miR6256 | Translation | 5.0 | 15.442 | 1 | 22 |
| Osa01LNT0022800.1 | osa-miR440 | Translation | 4.5 | 23.414 | 1 | 24 |
| Osa01LNT0022800.1 | osa-miR1436 | Cleavage | 4.5 | 24.673 | 1 | 21 |
| Osa01LNT0022800.1 | osa-miR1854-5p | Translation | 5.0 | 10.019 | 1 | 21 |
| Osa01LNT0022800.1 | osa-miR1846a-5p | Translation | 4.0 | 24.116 | 1 | 21 |
| Osa01LNT0022800.1 | osa-miR1846a-5p | Translation | 4.0 | 17.656 | 1 | 21 |
| Osa01LNT0022800.1 | osa-miR1846b-5p | Translation | 4.0 | 24.116 | 1 | 21 |
| Osa01LNT0022800.1 | osa-miR1846b-5p | Translation | 4.0 | 17.656 | 1 | 21 |
| Osa01LNT0022800.1 | osa-miR1869 | Cleavage | 5.0 | 15.628 | 1 | 24 |
| Osa01LNT0022800.1 | osa-miR1870-3p | Translation | 5.0 | 15.526 | 1 | 24 |
| Osa01LNT0022800.1 | osa-miR1878 | Translation | 5.0 | 13.777 | 1 | 24 |
| Osa01LNT0022800.1 | osa-miR1320-5p | Cleavage | 4.5 | 12.271 | 1 | 21 |
| Osa01LNT0022800.1 | osa-miR1846c-5p | Translation | 4.0 | 24.116 | 1 | 21 |
| Osa01LNT0022800.1 | osa-miR1846c-5p | Translation | 4.0 | 17.656 | 1 | 21 |
| Osa01LNT0022800.1 | osa-miR2871a-3p | Cleavage | 4.0 | 12.952 | 1 | 21 |
| Osa01LNT0022800.1 | osa-miR2871b | Cleavage | 4.0 | 12.952 | 1 | 21 |
| Osa01LNT0022800.1 | osa-miR2875 | Cleavage | 3.5 | 10.901 | 1 | 24 |
| Osa01LNT0022800.1 | osa-miR2921 | Cleavage | 4.0 | 14.381 | 1 | 24 |
| Osa01LNT0022800.1 | osa-miR2922 | Cleavage | 4.5 | 16.529 | 1 | 20 |
| Osa01LNT0022800.1 | osa-miR812n-5p | Cleavage | 4.0 | 16.124 | 1 | 24 |
| Osa01LNT0022800.1 | osa-miR5076 | Translation | 5.0 | 8.699 | 1 | 22 |
| Osa01LNT0022800.1 | osa-miR5154 | Translation | 4.5 | 15.107 | 1 | 24 |
| Osa01LNT0022800.1 | osa-miR5501 | Translation | 4.5 | 15.95 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0022800.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0022800.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0022800.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0022800.1 | 1 | qNVB-1-1 | Morphological trait | Culm/leaf | R2159 | C178 |
| Osa01LNT0022800.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0022800.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0022800.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0022800.1 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)