© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0250400.1
GATACCCATCAGTAAACTTGTACATGGCCAAAAAACAGATTTACAGCGGCGATACCTAACACTCATCTAATTACCTTTTAAGTACCCGGAGAGATCTATACAGGCCACAGTAAAAAAGAAGAGAACACATCCAGTCTCCACCAGGACACCCCTATTGGCTATTACAGTGTATCTCAAAACAAAAATCTCCACATTTGTCAATTCACCAGATTTGCTTATTGATGCCAATGCTTAAAAAGGATTAGCGTCAACATCTGTACAGCTTAGTGACTGCTGACATTGGCTAGTCTTGGACCCCATCCGCACTCGGTTTTCTCCTGTAATGATTAACTTCTCCACACGCGCAACTATATGCTTCCCGAAAGTGTAGTTCTTCAGTTCGTTCAAATGCATCTTGATGCTTGAGAGGATCACAACTAGGAATTTGTCATCACATGTCTGAAGGATTCTCTGTACAACATAATTGCCAAACTGATCCTTCATCAGTCCCTGGAATGTTTGGCCAGAGGATACAATCTCTCTTATAAGGCCTTCACGTTCATCAGGAGTTCCAAAAGATAGACACTTTTCCACAACATTAGAAGCATACTTCTGCTGGCTCAAGTTCACCACTTGCCCAGAAAGCTTTTGAATAATGGATGACCGCTCCTCTGGCCTACCATGTTCTAAGACGTGTTGAACAACATAGTTTCCAAATTTATCTTCTGTCAAATCAAAAGCACGTTCGACAATTTCATCCATCACAGCACTTTGAGTTGCTGGATTATGGCAATGCTCCAAAACTCTCTGAATAACTCTGCAGCCATATTGGTGAGTGCAAAGCGGATAAATTTTCTGAAGTATATCCTCAATTACAAATGGAATGTGATCTTCTGGAACACACTCTATGCACTTCTGGATTACGTGGTTACCATTCTGATCAGAAATACATCTGAGAACAGAATTCTTAAGCTCACCAACAATAGATATCTTTCTCTCCAAGTCAACCACATCAATGACCTTCTGAACAACTCTGCAACCATACATCTGAAAGCTGAGTTGCAAAAAGTGACCTCTGAGCTGATCTGCTAACTGGCTTAACTGGCTTTCTGTAGCAAACTCAAAAAACTTCTGAATCACATAATTGCCAAATACATCAGTTGTCAGAGCAATAGCATTGGTCAGTATCTCTGGAAAGATTTTTTCCCTGTCATCAGCTGAGGCAACCTCTAGTTTTTGTTGAATAAAACGACTTCCAAATTGATCCATACTAACTTCCATAACATGGCCCACTACATTAACAAGCTCCAAGGGACAAGCACCACTTCTATTTGCAAGATCCAAAGAAGACAGATCCAGGCAGTTTGCTACAGGATTATCTTGGTAGATTTGTGATCCCATATTTCTACCAGGTGTCCTCCTACTAGAGGATAACATCCGCGATTGCTGATCACCAAGATATGGAATGCCCCTCAAATGTGAATAAGCATGGGACCCTGATCTTTGCATTCTTGAATATGGAAAACGAGGTCCATCATGATATAGTATGTTGTCATTATATGAGGGACCAGATTTTGACTGAAAGACATTATCTTCCTGCAAACAACGCTGTGCAATAAGTTCTTCAAGGAAATGGTTCCTACTCCTGATTAAGTCCAAGTCTGTGATGTTGCGTCTGTTTCTCAAGGGGTTGATTATATTTACCATATCTGCATTGCTATGGTAATTATTCTCGTCAAGATTGCTTAGCTGCATCAAAGCTAGTTGATCAGCAAGAGATAGGCGATCCACATTCTTCATGTGATGGTTATTATTCCTTGAAACATAGGGACTATCCATAATACTGTTCTGCCTGCGTAGAAGACCATCTCCATATGAAGGTAGTGAATGAACATCCAAGTGCTCACAACCAAGCGTACACAAAGCATTGCCAGATAAAGGAGAACGGCAGTCATTGGCAATCTTAGAGGAAAAATGCCTGTCGTGATTACGCATTTCCATTTCATCAAGCAGGTCTTTGGCAAGGCCCCTTTCATCATATTCTAAATGATTAGACAAGTTCACCCTAGATAAAGCATTTGAAAGATCAGAGTCAGAGAGATAGGTGGACTGAAGGTCCCTTCTAGCAAAAGCATTCATCTTTCCCATGTTTGGCATGAAGCGATTCTCGGCATGCCTATGAAAGTCAGCATCATCTGTTTTGGTCTGTATCCATGGGGAACCAACATTAACTGCAGAGTGATCCAGCATAGCGCCAACACTATGAACCCGGGTTGGTCCAAATTGCTGTCCATTAAACTCTCTCGTACCATTAAGGTGGAGGCCTGGTGCTCCATTAGATAATGACTCAGAATTTCCAAAATGATCCTGCGCGGCGGCGCCGCGCCGCCGGCCGACCTCGTCGAGCCTCGCGCCGAACCCATCCATCCCGGAGAAGAACGACCCGCCGCCGCCGCCTCCGCCGCCCCCGTAAACCCCCTCCACCTCCTGCTGCGCCACCGCCGAAGCCGCCGCCGCCGCGGCGCCCTCCATGGTCGGCGGCGCGCTGCCGCTCCTCATCGGGTCCCACCCCCACCCCGCATCCCCCTCCCTCTTCTCCTCCTCCCCTCCGCCGCCGCCGCCATCGCCGAAGGGAGCCATCCCCTCTCTCTCCCCCACAACGCGCGCGCAAGCGAAACGAAAACTCGCGTGTGGTTTTGAACCCAAAACCCCACCCCCGCGGTCGCGCCGAAATGGGTGGGTGCGGTTTTTGGGGTGGTGGCGGCGCCGAGTTAGGGTTAGGGTTTTGGTTGGGTTTTAGGGCGGAGAGGGTGGGGGCGCGCGGGCGGGAGAGGAGAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0250400.1 | 4 | 6907151 | C | T |
| Osa04LNT0250400.1 | 4 | 6903225 | A | C |
| Osa04LNT0250400.1 | 4 | 6903534 | G | A |
| Osa04LNT0250400.1 | 4 | 6904010 | T | A |
| Osa04LNT0250400.1 | 4 | 6904255 | C | T |
| Osa04LNT0250400.1 | 4 | 6904353 | G | A |
| Osa04LNT0250400.1 | 4 | 6904803 | T | G |
| Osa04LNT0250400.1 | 4 | 6904870 | A | G |
| Osa04LNT0250400.1 | 4 | 6905049 | A | G |
| Osa04LNT0250400.1 | 4 | 6905126 | A | G |
| Osa04LNT0250400.1 | 4 | 6905194 | G | A |
| Osa04LNT0250400.1 | 4 | 6906266 | T | C |
| Osa04LNT0250400.1 | 4 | 6906930 | A | G |
| Osa04LNT0250400.1 | 4 | 6907248 | G | C |
| Osa04LNT0250400.1 | 4 | 6907261 | A | G |
| Osa04LNT0250400.1 | 4 | 6907306 | A | G |
| Osa04LNT0250400.1 | 4 | 6907555 | C | T |
| Osa04LNT0250400.1 | 4 | 6907642 | A | T |
| Osa04LNT0250400.1 | 4 | 6908069 | T | A |
| Osa04LNT0250400.1 | 4 | 6908128 | A | G |
| Osa04LNT0250400.1 | 4 | 6908592 | C | G |
| Osa04LNT0250400.1 | 4 | 6904753 | T | C |
| Osa04LNT0250400.1 | 4 | 6906467 | C | T |
| Osa04LNT0250400.1 | 4 | 6906643 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0250400.1 | osa-miR6245 | Cleavage | 4.5 | 19.748 | 1 | 21 |
| Osa04LNT0250400.1 | osa-miR5079b | Cleavage | 4.0 | 14.245 | 1 | 22 |
| Osa04LNT0250400.1 | osa-miR1855 | Cleavage | 4.0 | 15.081 | 1 | 21 |
| Osa04LNT0250400.1 | osa-miR2930 | Cleavage | 5.0 | 14.055 | 1 | 22 |
| Osa04LNT0250400.1 | osa-miR5079a | Cleavage | 4.0 | 14.245 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0250400.1 | 4 | qSNP-4a | Morphological trait | Panicle/flower | RM401 | RM335 |
| Osa04LNT0250400.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Osa04LNT0250400.1 | 4 | spp4-2 | Morphological trait | Panicle/flower | RG449 | CDO456 |
| Osa04LNT0250400.1 | 4 | An8-glum | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0250400.1 | 4 | nan | Morphological trait | Root | RM261 | RZ69 |
| Osa04LNT0250400.1 | 4 | nan | Morphological trait | Root | RM261 | RZ69 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)