© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0251400.1
AACACAAACATTATTATTCACATGGTTATTTATGAAAAACATATATTGTCATTGGAATTTTTCACCCGTTGCAGCACACGGGCAGTTTTGCTAGTCTGATCTAAAAAGAAAGAGCCATGCTCAGTGCCACCAACTGATTAGTACATGCTTGCTTACTGATCACAAACAATGGAAAATCTCATAAAATAGCAGCACTGAAGTCACCAAAACTGAAAGAAAAACTGCATCCACAGTAGTTCTCATTGAGCAGGACATCCGCTCCTCATCCACGGTCAAGCGCCATCCTTCGTTCTGCAAAAATGAGTAAAAAAATCAACATTATATAGCAAAAAACTAAATATGACTCAAGTCAATAGTACATCTCAGTTCCGCAACCAGGATCTCAAGCACAAAACAATACTACCCTAGTTAGTTCCCTTCCTATTCAATCATCATTGGAGGCACTGAGTTCAGCTAATCCAATTATATGAATTCAGGGTAAGAGCTGCCTACATGTGCATCAAAGGGAAGTGCTATCAATAATATGTTTAACACAAATGTACCATGTTTCACCCACGATGACTCAAAATGATGTAATTAATTAAGCATTGACTAATCACAAGTTTGGATAAGGTTATGTTATCCTTATTGTAACATTGTATTGTATAATGAGCTTTGAAGGAGAATTTTATCTCCTGACCTAGTAGTAATAAATAAATAAATTATGGCAAGATTAAACCAAAATATACATCCATACATGCCAAAAAGAAAATCAAACTTTAAAGATTCCTAGACTCGTAGCATCTGATCAGTGATGATCTTGAAAAAGAATCTCCCAAGAAATACAGGGAAGCAGCAGTATATTATATGTCCATTTTATATATTTTTGGTCATGTTCTCCACACAATTAAACAATATTATAGGGATTCTAAGCCATTAGACTCAATTAAAGGAAGTATAATTTCGTAATACATAGGGCACTGCATTCTAAAGCAAATAAATAACATTTTGTTCCAACCCAACCAAATCTCCAGGAAGCAAACACACAAGCATATCTAAAAGGACACATATCCGGCGATGTTTATTAGTGATTCCACTAAGAGCATAAGCATATCAAAGTAAGCAACGTCGGACATACCATGAACACTGCACAATTGGGTCTAAGTTACAGCAGAGCAAAGTTTAGCTGTTCCGCTCCATAATCCATGAAGATTTCAAAATACATCTATCAGTAAAAAATAGTACCTATGCCTATGTTAATTCTCCTGAACTACCATTGTATAATTCCACGTCTCCGCTCGCCAAACTGCTCGATCAAAATAGACATAAACCACTTTACCACTCTGCGCCTAACATATGGACTTCAAAGTTAAGCTATAAGGGTTAAAATATCTGGGGTTGGTGATTGCAAATCAGCTGCATATACCCACATATCTGGGGTTGAGAAAATTGTATGTTGAAGTCTAGTAGATTTGAAGGGAAAAAATAGATGGATATATATTACCTGCAGATTATAGTATTAGTAGTTTAGTACAATGCCTATCAATGGTGAATTACCGAAAGATGCATCCCTTGCAATGTTTATATAAGTAGAACTCTGTCAATAGAGTGCAGATGCAGAATTCCTCCACGATTTCCATCCACACCATGGCATATCTTTTTGTATATGTATGTATATGTGCCTGCTTGAATGATCAAGAGCAGTGGAGGACAATTGTGATCATCTCCAACATTGGTGTTTTCTTGAGCAGAAGATTATCCTGTTCCAATCGTGCGGAGGAGACCGGTGGCGGCGCGAAGGTGGGCGACAGTGCGACATGAGCCACCGAGGGCGACGACCTAACGCTGCTCCGGCGGCGGATTTCGAGGTGGAGATCAGGTGAGACGCGGAGGAACCGGCGAGTGGGGAGGGGAGCGCGCAACAGCGTGCAGCGCGTATTCGTGGAGAGAGAGGAGGTTAGGGTTAGGGTTTGGAGAGAGTTCCTCCCGTGAGTGGGGAGAGGAGCGGCATGCGGCGACGGCGACCTAACGGCGCACGATGGGGAGTCCAGGAGAGAGGAGGGGGGCGATGCGTGAGTTGGGGGTTGAAGATGTGGTGGGGAGGGGTGAGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0251400.1 | 4 | 7875980 | A | G |
| Osa04LNT0251400.1 | 4 | 7874700 | T | G |
| Osa04LNT0251400.1 | 4 | 7875363 | T | C |
| Osa04LNT0251400.1 | 4 | 7873595 | A | G |
| Osa04LNT0251400.1 | 4 | 7873634 | C | A |
| Osa04LNT0251400.1 | 4 | 7873754 | C | T |
| Osa04LNT0251400.1 | 4 | 7874303 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0251400.1 | osa-miR5794 | Cleavage | 4.5 | 23.181 | 1 | 21 |
| Osa04LNT0251400.1 | osa-miR5827 | Cleavage | 4.5 | 17.977 | 1 | 21 |
| Osa04LNT0251400.1 | osa-miR5179 | Cleavage | 4.5 | 15.715 | 1 | 21 |
| Osa04LNT0251400.1 | osa-miR6245 | Cleavage | 5.0 | 8.246 | 1 | 21 |
| Osa04LNT0251400.1 | osa-miR531c | Translation | 4.0 | 24.341 | 1 | 24 |
| Osa04LNT0251400.1 | osa-miR531a | Translation | 4.0 | 24.341 | 1 | 24 |
| Osa04LNT0251400.1 | osa-miR531b | Translation | 4.0 | 24.341 | 1 | 20 |
| Osa04LNT0251400.1 | osa-miR1866-3p | Cleavage | 5.0 | 11.273 | 1 | 22 |
| Osa04LNT0251400.1 | osa-miR1870-5p | Translation | 4.5 | 16.073 | 1 | 24 |
| Osa04LNT0251400.1 | osa-miR1877 | Cleavage | 5.0 | 7.041 | 1 | 24 |
| Osa04LNT0251400.1 | osa-miR2092-3p | Translation | 5.0 | 13.667 | 1 | 22 |
| Osa04LNT0251400.1 | osa-miR2098-3p | Translation | 4.5 | 7.18 | 1 | 20 |
| Osa04LNT0251400.1 | osa-miR2122 | Cleavage | 3.5 | 7.041 | 1 | 22 |
| Osa04LNT0251400.1 | osa-miR2926 | Translation | 5.0 | 24.227 | 1 | 20 |
| Osa04LNT0251400.1 | osa-miR5500 | Translation | 4.5 | 21.359 | 1 | 22 |
| Osa04LNT0251400.1 | osa-miR5500 | Translation | 4.0 | 12.959 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0251400.1 | 4 | An8-glum | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0251400.1 | 4 | nan | Morphological trait | Root | RM261 | RZ69 |
| Osa04LNT0251400.1 | 4 | nan | Morphological trait | Root | RM261 | RZ69 |
| Osa04LNT0251400.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Osa04LNT0251400.1 | 4 | qSNP-4a | Morphological trait | Panicle/flower | RM401 | RM335 |
| Osa04LNT0251400.1 | 4 | spp4-2 | Morphological trait | Panicle/flower | RG449 | CDO456 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)