© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0251600.1
TGCCCAAAATGATAAGTTTTCATGGCTAGAGTATAAAGAATCTAGATTACATCAGTATTCCTTACTGTGGGAAAATATATAGTAATACATTGTTAACTACTTAGTTTATGCTTCTACCTCTGATGCTTTCACAAAAGAAACCCTCACCAATAGCCACCACATGAGCATGAACCATTCTTGAAATGATGAAAACGACTGGGGTCGCGCACTACGATCTCATGGTCCACAATCTTGGAAATGTAGGTGAATGCGCTATGGCAATCACCACATACACGCAGGTTCTTTGTGATCCTTATTGGGCAACCAGGGGAAGTTGTGAGGAGACCATATGCAAGAGCAAGTTTCTCACTGTGCTCAACAAGAAGATTATTTTTCTCTTCCTCATCAACATCATGTAATGCGAAGTTTGTCTCAGGAACATATCCCATAGCTTTGATGCGATCAATTAGACTCTCCAGAAGAGCATAAATTTGTGGGGATAGTGGGTGTGATCGATCTCCGACAAAGAAAGATGCTGTGCCCTTTTGACCCTGGACCCAGCTGCATCCTGGCCTCTTCTTAATTCCTGATTTCTTCATCAAGTGCCTGATCCTCGCTACATCCTTCCACCGCCCTGCAGTGGCATATATGTTGGAGATAAGCGTGTAAGATCCATCATTTTCAGCATTCATCTCGACCAGTTTGTTCAGAGCATGTTCAGCAAGTTCAACATTTGAATGTACTCTACAGGCACTCAGTAATGCAACCCAAACTACTGCGGTGGGCTCCATTGGCATATCCTTAACTGTTCTCCATGCCTTATCTAATCGCCCAGAGCGGGCCAGCAAGTCAATAGCACAGGCATAGTGCTCTGCCCGAGGTGTCAAACCATAATCTGCACTCATGCTGTCAAAGTACGATAGACCTTGATCAACCATTCCACAATGACTACAAGCATAAAGAACAACCAGGAAGGTTATATCGTCAGGAACAAAGCCTGCTTTCCGCATCTTGTCAAATATGTCCAGGGCCTCACTACCACGACCGTGCATTCCATACCCTGTCATCATTGATGTCCAAGAAATAGCACTCTTTTGAGACATGCTATCGAATACATGCCTAGCTGTATCAACATCCCCACACTTCGAGTACATATCAATGAGGCAGTTCGCCACAAAGTATGCAGATGATTCATATCGGTGATGACGAAGCACATAAGCATGAATCTGCTTACCTATACGTATGGCTGCCAAATGTGCACAGGCCATCAAAATGCACGAAATTGTATAAGCATTTGGGGCTACTCCATATGGTTCTGAAATCATCTCCACGAAAAGCTTGAGGGCATCATTTGAGTCCCCATATTGTGCATGCCCCCCGATCATGACAGTCCAGGTGACAACATTGCGTTCCTCTAGAGGTATATCATCAAATATGGAGCGTGCAGCTTTGAAGCTTCTGCACTTTGAGTACATATCTATTAGCGCGTTGTACACCATAAGATCCTCATCCTCACCACCAAAATCATTATCCAAGGTTAGAAGACAGTTCTTTAGAGAGTAGGCATGAATTTCCGTACCCTGAGAAAATGCTCCCAAAGAAGCGCAGGCAGACAACACAGAGATGATTGTGACACAATTTGGCAAGGACCCAGAAAATATCATTTGACGGAATAAATTGAGTGCTTCATGGCTGCATCCCCTCTGAGAATAGCCTGCAATTACAGCAGTCCATGTTACCACATCTAATGGGATATTTTCCTTGCGCATGTTCTTGAAAAGCTCAAAGGCTGCCTCAAAGTTGCCACTTTGGGAGTACCCAGCCACCATTGCGTTCCAAGAAACCACATCTTTGAATTCCATCATGTTGAAAACCTTTACCGCGTTTTCCATCAAACCACACTTAGCGTAAGCATCAATCAGGGCATTACCAACAAAAACATCTGGAAATGTGCCATTACGAATAGCATTACCATGGACTTCTTTAGTTTGAGGTACTGCCTTTAGAGAACCACATGCAGGGAGTATGTTGACAATGCTAATGATGTCTGACCTTTCATTTGTAGGCTTCTCATGGACAATCAATGTCATCTTTGAAAACAGATCCAATGCAGTCCAAGCATTACTACTTTTAACATGGGCTGAAACAATAGAGTTCCATGAGATAACATCATCAATACCCCTCTGAGTTATTTCATCAAAGATCATGCTGGCTTCCTCCAAAGAACCACAACGGGAATACATTGCCACCAACGCATTGCATATGAAGACATTGGACTCAAAGCCATTGCAGCATATCAATCCATGGAATGCACTACCACAACGGTATGAAGGTAGCTCTCCACATGCTTTTAATACATGTGGTAGAGTAAAATGGTCCGGCCTAGTTCCAGCACGCAGCATGCGGCAAGAGACATTAATTGCACTGTCAAGGCGGCCTTGTTTGATGTGTTCTCGGATAAGTAGATTCCACCACACAGCTGGTGACGGTGTAACACGTTCCAACACCAAGAGAGCATAGTCGGTAGCACCACAAGCAAGATAAGAAGCTACGACACCAGTACCCAGAGATCTTGGAGATATAAATGGTTCGGATGGCAATGCTGGTAGTGAGACTGACAATAATGGTGTGGGCAAAGAAAGAAGACCAGAAGCAATTATCTGTTGGTGAATTTGATGAACTGTATTTGCAGACTTGCATTCCTTCAATAGGGATGCAAAGTGACTAGGATAAACATCTACACCAATGCATGCTGCCCTTGCACCTGAAAGGAACCATTCTCCAATTGGTTTTACCGCCTTAGGCAAGTTCAAAAGCATAGCTGCAGTAGAATACCATTATGCATAATGAATCCTCAAAGAAACAGCCATTGCATCACTCGTCGGTGGGGTTAGCCACGATGAGCCAGGGCGACGCGGTCGTATGTGTCGATGGGGTGCCACAGATTGGGTGCTGCAATGTTGTTCTTATGAATGGCGGCGAGGGCGCGGTGGACATGGAGGACGAAGGGCCAAGTCACGGTGTTGGACGATGACGTCGGCGGTGAATCGTCGCCAGCGCCGTGGGCGACGGTCCTGGACGACAGCGGAGGGCAACGCGAAAAAAATGAATAAAATGGCTAGACCACAGTACAAAGCAGAATAATTGAATAAATTGGGTAGACTATAGTATAAAGCAGAATGCATGAATAAATTAACGGTGTACGTATTCTCTTCAAAATTCACATGATCCATACCAAAATTAACGGGTCTGCCTTGGTAAAATTTTTTGTATGGAATTGGGTAAGAAAACATATAAATGTGATGAGAGCTGAGGAGAAACATGACCAGGAGGCCTGGTAGGTTCAGGTTTGACAGCTATGTCCATCAATCTGTAGCTTCAATGAACACATATAAGATGTAGACAGTGTAGAAAGCAGAAAACTGAGAACCACGGGATCATCTTGAAGAGAAACCCGTCAGTATTGTGCTGATCTTCCTTTCCGGGATGCAGCAGGACCACGGCACGTCGGCACCCCTCCCCTCCCCTCCCCTGCTCTGCTCGCGAGATGGGGGGATTGGCACGGAGGCTACGATGCGGGCGGTCGGCGTCGGTGATCCGGTGGCGGCGACGGTGGAGGAGGAACCGACGACGGCTCTCGCTCCAACGACGGGTGCGCACGGCGAAGGGGATTGCCGGCGATTGGAGTGGCGGTGCTCGCTCCAACGACGGCTGCGAGAGAGGAGGGCGTCCGCGTTCTGACTAAAAGAGGAGAGGGAGGCGTGGGAGACCGGGAGTGAGGTGCGGTTTCCGCGTCCTCGGTGGCCGGCGGGGTTGGGCGGTGCGGATGCGGCGGCGCAGGGGAGGAGGGGCGGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0251600.1 | 4 | 7895032 | C | T |
| Osa04LNT0251600.1 | 4 | 7896180 | G | A |
| Osa04LNT0251600.1 | 4 | 7896827 | A | G |
| Osa04LNT0251600.1 | 4 | 7896890 | G | C |
| Osa04LNT0251600.1 | 4 | 7896906 | A | G |
| Osa04LNT0251600.1 | 4 | 7897075 | A | G |
| Osa04LNT0251600.1 | 4 | 7897218 | C | A |
| Osa04LNT0251600.1 | 4 | 7897236 | C | G |
| Osa04LNT0251600.1 | 4 | 7897750 | A | G |
| Osa04LNT0251600.1 | 4 | 7897930 | T | C |
| Osa04LNT0251600.1 | 4 | 7900422 | T | C |
| Osa04LNT0251600.1 | 4 | 7900426 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0251600.1 | osa-miR5537 | Cleavage | 4.5 | 23.44 | 1 | 22 |
| Osa04LNT0251600.1 | osa-miR812t | Cleavage | 3.5 | 12.255 | 1 | 24 |
| Osa04LNT0251600.1 | osa-miR812u | Cleavage | 3.5 | 12.255 | 1 | 24 |
| Osa04LNT0251600.1 | osa-miR1440b | Cleavage | 4.0 | 19.719 | 1 | 21 |
| Osa04LNT0251600.1 | osa-miR156j-3p | Cleavage | 5.0 | 23.49 | 1 | 22 |
| Osa04LNT0251600.1 | osa-miR419 | Cleavage | 3.5 | 7.254 | 1 | 21 |
| Osa04LNT0251600.1 | osa-miR530-3p | Translation | 3.5 | 18.319 | 1 | 21 |
| Osa04LNT0251600.1 | osa-miR810b.1 | Cleavage | 4.5 | 18.67 | 1 | 21 |
| Osa04LNT0251600.1 | osa-miR1852 | Cleavage | 3.5 | 20.729 | 1 | 21 |
| Osa04LNT0251600.1 | osa-miR1856 | Translation | 5.0 | 17.278 | 1 | 21 |
| Osa04LNT0251600.1 | osa-miR1862e | Cleavage | 4.0 | 15.192 | 1 | 24 |
| Osa04LNT0251600.1 | osa-miR1881 | Cleavage | 4.5 | 15.836 | 1 | 24 |
| Osa04LNT0251600.1 | osa-miR2099-5p | Cleavage | 4.5 | 14.68 | 1 | 22 |
| Osa04LNT0251600.1 | osa-miR2879 | Cleavage | 4.5 | 23.059 | 1 | 24 |
| Osa04LNT0251600.1 | osa-miR812n-3p | Cleavage | 3.5 | 12.255 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0251600.1 | 4 | spp4-2 | Morphological trait | Panicle/flower | RG449 | CDO456 |
| Osa04LNT0251600.1 | 4 | An8-glum | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0251600.1 | 4 | nan | Morphological trait | Root | RM261 | RZ69 |
| Osa04LNT0251600.1 | 4 | nan | Morphological trait | Root | RM261 | RZ69 |
| Osa04LNT0251600.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Osa04LNT0251600.1 | 4 | qSNP-4a | Morphological trait | Panicle/flower | RM401 | RM335 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)