© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0251800.1
ATCTGACATAAGTTTGTTGTTAAACACCCAATCATTCCTAAACAGCCAAATTGCCCAGGTTCCCGCCGCAACAAGGCACAACAACGGGGTGTTGCGAGCATTGCCTGGGCAAAGCAGCTTGTCAAGCAGCTCTGTTCTAGTGTTCGGCACTTTAGCCCAGCCTAATGCATCTCTAACACAACACCAAAAAAATTTAGTAGGGGGACATTGGAAAATTAGATGATCAACCCCTTCTAACTCCCCACAAAGTTTGCACTCCACCTCACCAGGCCATTTCATTTTTTTTAATTGCTCAGCTGTTTGTATGCGCCCTTTTATCATTAACCAGAGGAAAATCTTAACTTTCAGCGGCACTGGGATACTTAGAATTTCTTGGGCTCTTCTGTCTCTTACCCCTCCAAAAATCATCTCTTTATAAAGCGACTTAGTAGTGTACCACCCTGATTTAGTCAGACCCCAGCTCATTTTGTCATCTTCTTCTGTTAACGTCACCCTCTCTAGAATCTCATGCAAATTATCCCACTCTTCAAGGTCTTGCTCACTTAATGATCTTCTTAATTCGATATTCCACTCCCCATTTGTACAAATTTGTTTGATCGTAGCTCTAGGAGCTCTACAAATATTGTACAGATATGGGAATTGAATTTTTAAAGCAGTATCTCCCACCCAAACATCATCCCAAAAGAAAGTATTTCCCCCACTCTCCACTTTGTACTTACTCCCCATCGTCATCCATTTTTTGACTTCATGAAGTCCCTTCCAGAATTGTGACCCCCCTTCCGCAGTTGTTTGGAAAAAACCACCACTCCCATAGTACTTTCTCCTTAGCAAGTTACAGACCGGATCTGCATTCCCCGACTCTAGTCTGAAAATCCACTTACATAGCAAGGCTATGTTCATCACTCTTGTGTTGGTAAACCCTAACCCTTCAAATTCTTTTGGCCTACACAGCGCCTCCCATTTAATCATATGATATTTCCTCTTGTTTTCCAATCCTTCTCAAAAAAACCTAGACCTTAGACTGTCCATCTTATGGTGTATAGATTCAGGAAGCAAATACATCCCCATCATGTACATTGGTATGCTGCTAAGGCAGGAATTGATTAAGATTGCTCTGCCCCCTTGCGATAGGTGACCACACTTCCATGTGGCCAGCCGTTTCTCGATCTTTTCAGAGGGAATTCCTAGTTCAGCTGCCGAAAGTCTGCCATCACTGATTGGAACCCCCAAATATCCGATAGGCAGTTTCCCAAGCTTGCAATTGAATATATCCGCCACTCGTTGTGCTTCGCCCTCATCAGCCCCCACAACAATGACCTCGCTCTTCTGATAATTAATCTTCATTCCTGACATCTCTTCATAACAATATAGCAGGAATTTAGTCGTCAGCACACTTTCTTGTGAGTTGGCCATAAAAAGAATCGTGTCGTCCGCGTATTGAAGATGTGTCAAACCTCCTGGAAATAAATGTGGTACCAGTCCTTCTAAATGGCCAGCTTCTTTTGCTAAGTCCAACATTATTGCAAGAGCATCTGCCACCAAATTAAAAAGCAAAAGGGATAGAGGGTCGCCTTGTCTCAACCCCTTATGCGTTTTGAAAAACTCCTCACTCGATCCATTAAAGTTTATAGCCACTCTACCGTTCGTTGTTGCTTGTTTAATCCACCCTATCCATTTATCATCAAAACCCTTTCTCTGTAAAACATCGAATAGGAAGCTCCACCTCACTTTATCATAAGCTTTTTCGAAGTCTAATTTCAAAATTATCCCCGATTGGTGTGAACTCTTCAATTCGTGCAGGACCTCGTGAAGAATGACCGCCCCATCTAAAATATATCTACCTGGGATAAAAGCTGTTTGACTCGGGCTAATCACTTTCTCTGCAACCTTTGTCAGTCTGATTGTTAAGATCCTTGTTAAAAGTTTGAAGCTAACATTCAGCAGGCAGATCGGTCTGAATTGCTTAATTGTGTTAGCATCCTTCACTTTCAGGATCAAAGTTATTACACCATAATCCAGTCTCCAAAGGTCTAAATCCCCCTCAAACATCATATCTAACATCTCTTTAATTTGGTCTTTAAGTTGTGGCCAAAATTCTTTGATAAAAGTCGCTGAGAAGCCATCGGGTCCGGGAGCCGTGTTAGATTTCATCCCTCTTAGAGCCTCCTCTATCTCTTCCATGGTGAATGGCCTGGTCAATTTATCATTGTCTTCTTGATTCAGCTTCCCCCTATTATTCCATATATCTTGACTCAGAAACACTTTTGGTGCTTGCTCAACCCCGAACAGCTTCTTATAATAGCCGTAAACATGTTCTTTTAACTTTGTTTGATCATTGATTTCCCTCCCCCCATCCTCGAGGGAGGTTATCATTGTTTTCCTTTTTCTCCCATTCACCACCCCATGAAAAAACAATGTGTTTGCGTCGCCTTCCAAGGTCCACTTTGTGCCACTCCTAATTTGCCAATAAATCTCCTCAGCTTGATAGATCTTGACTAAATCCTCCTCTACTTGATATCTTTCGGCCCATTCTGCTGTTGACAGCACCCCTCTTTCAGCCTCCTCGTCTATTTTCTTAATTCTTTCCAACAATCCTTGTCTTTTCTTAAATCACCCCTCCTATTCCTGGCCCACCCTCTCATTAGCCTCCTGAGAACTGTCCCTTGACAATTCCAATGATCTAAGATATGTTTCTTCCTCCTTTCCGGCCACTTAGCTATCAGCCACTCTTTGAATCCTTCCTGGGTAAGCCAAGATGGATCAAATCTGAAAGCATCTCTCGACCACACCAGCTGTTTTTCTAATTCTACCAACAACGGATTATGGTCAGATCCCACTCTTAACAGACTTTTAACCATCGTTAGAGGATACATCTCTTCCCACGAAGAGGACACCAACACCCTATCTAAAACCTCCATGACAGGGTCTGCTTGTTTATTTGTCCACGTATATTTGCCTCCCGATCTATGAAGCTCCCTTAGTTCTGCCAAGGCAATGAAACTATTGAACTTGTCAGCCCACCTCTTATGTATATTACCGTTAGACTTCTCATCTGGGAACCTAATCATGTTGAAATCCCCACCCATCATAAAGGGGATCTGCATACTGTTACTTTTGCCTAAAATTTCCCTCAGAAAATCATCCTTCTTTTCCCCCTGTACTGGGCCATAAATGTTAATAATCCCCCACTCTTTACCATCCCTTCTATTTTTTAGTACCATGCTGAGAAAAAATTCACCCAAATCCATCTCCTTTACTTCGAACAGATCCAAATTTGCACCCAGCAGCAAACCTCCAGAGTGCCCGTTGGCTGGTTTAGTTATCCATTGAAAGTCTCTTCCTCCACAAAAATTCCTCAACTCCCTTAAATGAAAACTCTCTCTTATTGTTTCTTGAAGGCAAATGACCTCTATTTTATTCTGGTGAATCACTTCTCTAAGGAGCCCCCTCCTGCCCATATTCCCAAGCCCCCTCACATTCCAATATAACACTCTCATTATTAACTTGTGTTTTTTCTTTTGGTATCTCCCCCTACTTTGGCCGGCTCTATGCCTGCAGCCTCCGTAGTGGGAAATACACATCCCTCTATCTCTGTTGTCAAAGGCAGCCTCTCAATTGGGTCTTCATTGATCAACCTCTCTTTAGCAGTGTGAATCATTGACTGAGCTAACTCTCTGGCTTTAATTGTTTCAATGTTCTGATTCTGCAACCCCTCTGAAGTTCCTAAATCTACACCTTCATCTCTAGCTATATTCACCAGCACAGATTCATCAACAGTATTAAAAATAGCATACTTATTTTTACCTGAAATGTCGTTCCTCACCGAAGTCCTTTGTTGAGCCTTCAGAGCAACAGGTACTCCGTCTCTTGCAATTCTTGAGCTTTGTCTTGTAGCCACCACTTTCTCTTTCTGCTTCCTTTTCTTCTTCTTCCCCGATGAGATAAAGCCATCACTAGTCAGCTCTTGCCCCTTCACTTCTCCAGTGATCATCTCTAGAACTCTGATATCATCCTCCATCCGATCCTTTAGTGAAATCTCATTTTCCTCCTCGGCAGCCTTGTTTTCTTGTTGTATAACAGGAGTGACCCCCCCTATATTGTTACCATCTTCTCCTAATTCTTCTAAAACATTTGCTCCACTTACTCATTAATTCCCTGGACCTCCTTCCCTTGTGAGCATAAAACCACTTCTTCTGCCTCATCTGAAATATCTGGGATATACTCAGGTATATCCACTTTCTCCCCTTCCCCCAAAGAGTCTTCCTCTTCTTCCACCATCTCATTGTTCTTGTGTCTCTTGTGCCCATGATCTCCTTCCCTTTTTTGGGTGTCCTTCTTCTCTTCTTCTTCTTTTTTTGATTCCCCTTTGTCAGCCTCATGGCTGTCCTGAGAGTCTTCCTCATCATCTCCTCTCCTCCCTCTTGATCTGTATGCAGGTTTGGGATCATCAGGATCATCTTGGTGATGTTGTCTTACTCCTTCAGGATTCCAAGTAATCCTATACCCAACTCTGTTTAGAAAGATCTCAGACGTCCCCCCTATCTTCAAAGGATCCCTGCAAAGGACTTTTACTCTCACAGCTTCTCTGTTCAAGCTAATTGAGTCTACCTCCATGGGATCTCCAATCAAGTGGGCAATTTTTTCAATAACTTTTTCAGATCTAGCCAATGGTGGGACTCCTGTAGCTCTGACCCAAACCTCCTGAAGCTCGGCAAAGGCCTCAATGGTTCTCTCAGTCTCCCTAACATTAGCTCTAGCATTGGATAATTCAAAGTCAAAGCCCTTGAGTCTTGTTAACTCCCTCCTAGCATCTTTGGATGGAAATTCCACCAAATATTTCTTCTGCTCCACCTGTTTAACCTTCCAATCCCACTGCTTATGTTTCTCATACAGGTATTTCATCTCCATAACAATCTTCGAGATCGAAGTCAGCCCACTTTCGATGGTTAGAATTCCTGTAACTGGACGCTTCTCCACCTCATCTTCATGGTTAAAGCAGCAACCGGCCAAGAAGGATGGGCCAAACATGTGTGTGGATCACGTAGCTTGTAAATCTGCCGATCCTCCCGCTTCACCGTGATGACCAAATCGGTGTCAGCAGAATCATCCGCCTCCACCTCCGCCTCCGCCTGAGAGTAAGTGCGATGAACAATACGTGCTACTATGTCCTGCTTGGCCGGGGAAGCAGTGGATCGAAAGTCGAAGGAGGAGAAGCTGCCCTTCCCCATGGTGCAGAGAAGGTGCCCCGGAACAATGCGCTTGGATTCCACCTGCAACTCAACGATGGACAGCTCCTTCTTGCCTGTGCCTGAACCTGCAATTCCTGGAGGGAAGACCATGACCTCCATGTAGTACACTGAAGCCGCGCCGCCCTTTGCCATGGAGCAGGAAACGAAGCGGTGGTCGCCAAGAGGCACGGCCTGACCGGTGAAAGGCAGGTTCGTGTCGAGCACCATCTCCCACTGCTCGGCGTCCATGTCGAAGGCGCAGGTGCCCTTGTCCTGGCCCTGCTGCTGCACCGACACCGAGAGCAGGATGTGGGAGCCGACGATGGCGTAGGCCGCGACGCGCACCGCCGGCGGATCGCGGTACTCCAGCGGGTTGAGACGGCACGGGAAGATGGGCGGCGGCGGCAGCTCGCGCCATCCGAAGTAGCCGAGGCTGTCGAGGACGAGGAACCATGGCTCGAAGTCCCGCCCGTTCACGACGGAGGGGCAGCAGGAGACGGCGTAGAGCTTGCCGCCGTGCGAGACGAGGACGGGGTTCACCTTAGGGAACACGAGCCGGCAGCCGGCGCGCACCGTGGAGGTCTTGGGGTCGTACACGGTGGTCTGATCCAGCCCGATGCCCACGATCCGCGTCCCCACCGCCGCGAACGACATGCCGCGGCCGCTGGTGGAGTGGAGCAAAAGGCGGACGGTGGCGCCGGCGGCGACCTCGATTACCGAGTGGGTGGGCTCCTCCTCCACTCCGTGCGCCAACACCATGTACACCGCTGGCTCCTTTGCGGCAGAACCCTCGGCTGGGGCCTCCTTCCCCTTCCCCTTCCTCTTCTTGTTCCCCGAGCGAACGCGGACAAGCCGAGCTACCGGTGCCGGTGCTGGCGCCGGCGCCGCTGCCGCAATTTTCTTCCTCTTCTTGTCCGGCATCATCATCTTCCCTCGATTGGAATCAGATTCGCCTCCCTTCTCGAAAACGAGTGGGTAAACGAGGTTAGCTACGATCAAACAAATTATTATTATTAGGTGGAAAGTTCATTGAGGTGTCTTAACT
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0251800.1 | osa-miR5807 | Cleavage | 3.5 | 10.405 | 1 | 24 |
| Osa04LNT0251800.1 | osa-miR5815 | Cleavage | 5.0 | 11.895 | 1 | 24 |
| Osa04LNT0251800.1 | osa-miR5815 | Cleavage | 5.0 | 14.101 | 1 | 24 |
| Osa04LNT0251800.1 | osa-miR5822 | Translation | 4.0 | 22.237 | 1 | 21 |
| Osa04LNT0251800.1 | osa-miR6252 | Cleavage | 5.0 | 6.366 | 1 | 23 |
| Osa04LNT0251800.1 | osa-miR6253 | Cleavage | 4.5 | 8.66 | 1 | 22 |
| Osa04LNT0251800.1 | osa-miR6255 | Cleavage | 3.5 | 8.723 | 1 | 22 |
| Osa04LNT0251800.1 | osa-miR164e | Translation | 5.0 | 7.594 | 1 | 21 |
| Osa04LNT0251800.1 | osa-miR169q | Cleavage | 4.5 | 19.781 | 1 | 21 |
| Osa04LNT0251800.1 | osa-miR171c-5p | Translation | 4.5 | 17.653 | 1 | 21 |
| Osa04LNT0251800.1 | osa-miR171c-5p | Translation | 5.0 | 12.83 | 1 | 21 |
| Osa04LNT0251800.1 | osa-miR435 | Translation | 4.0 | 9.971 | 1 | 20 |
| Osa04LNT0251800.1 | osa-miR395v | Cleavage | 5.0 | 12.664 | 1 | 21 |
| Osa04LNT0251800.1 | osa-miR818a | Translation | 4.5 | 14.178 | 1 | 22 |
| Osa04LNT0251800.1 | osa-miR818b | Translation | 4.5 | 14.178 | 1 | 22 |
| Osa04LNT0251800.1 | osa-miR818c | Translation | 4.5 | 14.178 | 1 | 22 |
| Osa04LNT0251800.1 | osa-miR818d | Translation | 4.5 | 14.178 | 1 | 22 |
| Osa04LNT0251800.1 | osa-miR818e | Translation | 4.5 | 14.178 | 1 | 22 |
| Osa04LNT0251800.1 | osa-miR529b | Translation | 4.0 | 8.369 | 1 | 21 |
| Osa04LNT0251800.1 | osa-miR1428a-3p | Translation | 4.5 | 12.811 | 1 | 21 |
| Osa04LNT0251800.1 | osa-miR1428e-3p | Translation | 4.5 | 9.41 | 1 | 21 |
| Osa04LNT0251800.1 | osa-miR1428e-3p | Translation | 5.0 | 12.811 | 1 | 21 |
| Osa04LNT0251800.1 | osa-miR1876 | Cleavage | 4.0 | 15.038 | 1 | 24 |
| Osa04LNT0251800.1 | osa-miR1878 | Translation | 4.5 | 15.245 | 1 | 24 |
| Osa04LNT0251800.1 | osa-miR2055 | Translation | 4.5 | 12.112 | 1 | 21 |
| Osa04LNT0251800.1 | osa-miR827 | Translation | 5.0 | 8.771 | 1 | 21 |
| Osa04LNT0251800.1 | osa-miR5511 | Translation | 3.0 | 14.04 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0251800.1 | 4 | spp4-2 | Morphological trait | Panicle/flower | RG449 | CDO456 |
| Osa04LNT0251800.1 | 4 | An8-glum | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0251800.1 | 4 | nan | Morphological trait | Root | RM261 | RZ69 |
| Osa04LNT0251800.1 | 4 | nan | Morphological trait | Root | RM261 | RZ69 |
| Osa04LNT0251800.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Osa04LNT0251800.1 | 4 | qSNP-4a | Morphological trait | Panicle/flower | RM401 | RM335 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)